Gene annotation
Transcriptome id Sobic.001G004000.1
Synonym Sb01g000450
Functional annotation avr9/Cf-9 rapidly elicited protein, putative, expressed
UniProt A0A1B6QGN1
Pfam PF11961 PF05003
Panther DB PTHR31371 PTHR31371:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G51670 : Protein of unknown function (DUF668)
RAP-DB (Rice) LOC_Os03g64130.1 : avr9/Cf-9 rapidly elicited protein, putative, expressed
MaizeGDB (Corn) Zm00025a016287
Brachypodium KQK11990
Barley HORVU5Hr1G124940.8 , HORVU5Hr1G124940.3 , HORVU5Hr1G124940.2 , HORVU5Hr1G124940.7 , HORVU5Hr1G124940.6 , HORVU5Hr1G124940.5 , HORVU5Hr1G124940.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
2 Sobic.007G224600 - -
3 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
4 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
5 Sobic.002G284901 - -
6 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
7 Sobic.001G115800 expressed protein -
8 Sobic.003G120400 expressed protein -
9 Sobic.009G198400 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
10 Sobic.002G218200 protein kinase domain containing protein, expressed -
11 Sobic.001G130900 expressed protein -
12 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
13 Sobic.010G136601 - -
14 Sobic.001G223400 glucosyltransferase, putative, expressed -
15 Sobic.004G357033 - -
16 Sobic.007G221800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
17 Sobic.003G427500 cytochrome P450, putative, expressed -
18 Sobic.003G200501 - K11252: histone H2B
19 Sobic.007G093400 - -
20 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -


Gene co-expression network
sample Sobic001G004000 Sobic001G004000 Sobic004G275500 Sobic004G275500 Sobic001G004000--Sobic004G275500 Sobic007G224600 Sobic007G224600 Sobic001G004000--Sobic007G224600 Sobic006G065700 Sobic006G065700 Sobic001G004000--Sobic006G065700 Sobic001G519300 Sobic001G519300 Sobic001G004000--Sobic001G519300 Sobic002G284901 Sobic002G284901 Sobic001G004000--Sobic002G284901 Sobic002G320900 Sobic002G320900 Sobic001G004000--Sobic002G320900 Sobic001G115800 Sobic001G115800 Sobic001G004000--Sobic001G115800 Sobic003G120400 Sobic003G120400 Sobic001G004000--Sobic003G120400 Sobic009G198400 Sobic009G198400 Sobic001G004000--Sobic009G198400 Sobic004G275500--Sobic001G115800 Sobic007G221800 Sobic007G221800 Sobic004G275500--Sobic007G221800 Sobic004G275500--Sobic001G519300 Sobic001G158000 Sobic001G158000 Sobic004G275500--Sobic001G158000 Sobic007G149600 Sobic007G149600 Sobic004G275500--Sobic007G149600 Sobic004G275500--Sobic007G224600 Sobic001G193400 Sobic001G193400 Sobic004G275500--Sobic001G193400 Sobic004G275500--Sobic002G284901 Sobic006G227800 Sobic006G227800 Sobic004G275500--Sobic006G227800 Sobic007G224600--Sobic001G519300 Sobic007G224600--Sobic002G320900 Sobic007G224600--Sobic002G284901 Sobic007G224600--Sobic007G221800 Sobic002G210200 Sobic002G210200 Sobic007G224600--Sobic002G210200 Sobic001G130900 Sobic001G130900 Sobic007G224600--Sobic001G130900 Sobic003G200501 Sobic003G200501 Sobic007G224600--Sobic003G200501 Sobic007G093400 Sobic007G093400 Sobic007G224600--Sobic007G093400 Sobic007G224600--Sobic006G065700 Sobic006G065700--Sobic002G320900 Sobic006G065700--Sobic002G284901 Sobic006G065700--Sobic007G093400 Sobic006G065700--Sobic002G210200 Sobic006G065700--Sobic003G200501 Sobic006G065700--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic006G065700--Sobic001G525000 Sobic010G074980 Sobic010G074980 Sobic006G065700--Sobic010G074980 Sobic003G427500 Sobic003G427500 Sobic006G065700--Sobic003G427500 Sobic001G519300--Sobic007G224600 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G223400 Sobic001G223400 Sobic001G519300--Sobic001G223400 Sobic001G519300--Sobic006G065700 Sobic001G519300--Sobic007G221800 Sobic001G519300--Sobic002G210200 Sobic001G519300--Sobic003G200501 Sobic001G519300--Sobic003G120400 Sobic002G284901--Sobic002G320900 Sobic002G284901--Sobic003G200501 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G430200 Sobic002G430200 Sobic002G284901--Sobic002G430200 Sobic002G320900--Sobic002G284901 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic003G367401 Sobic003G367401 Sobic002G320900--Sobic003G367401 Sobic001G115800--Sobic004G275500 Sobic003G102800 Sobic003G102800 Sobic001G115800--Sobic003G102800 Sobic010G258700 Sobic010G258700 Sobic001G115800--Sobic010G258700 Sobic001G115800--Sobic003G120400 Sobic001G115800--Sobic002G284901 Sobic001G115800--Sobic001G193400 Sobic001G115800--Sobic001G519300 Sobic001G115800--Sobic002G320900 Sobic010G073300 Sobic010G073300 Sobic001G115800--Sobic010G073300 Sobic003G120400--Sobic001G525000 Sobic003G120400--Sobic002G320900 Sobic003G120400--Sobic007G093400 Sobic003G120400--Sobic002G284901 Sobic003G120400--Sobic003G200501 Sobic003G120400--Sobic002G210200 Sobic003G120400--Sobic001G130900 Sobic003G120400--Sobic002G430200 Sobic003G120400--Sobic003G367401 Sobic007G175701 Sobic007G175701 Sobic009G198400--Sobic007G175701 Sobic009G198400--Sobic001G130900 Sobic009G198400--Sobic007G093400 Sobic009G198400--Sobic003G367401 Sobic001G213400 Sobic001G213400 Sobic009G198400--Sobic001G213400 Sobic003G065001 Sobic003G065001 Sobic009G198400--Sobic003G065001 Sobic001G115900 Sobic001G115900 Sobic009G198400--Sobic001G115900 Sobic009G198400--Sobic003G120400 Sobic003G126400 Sobic003G126400 Sobic009G198400--Sobic003G126400
Octagon: transcription factors


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