Gene annotation
Transcriptome id Sobic.010G036000.1
Synonym Sb10g003230
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5Z3X7
Pfam -
Panther DB PTHR33120
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g05440.1 : expressed protein
MaizeGDB (Corn) Zm00025a041492
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G179100 protein binding protein, putative, expressed K12821: PRPF40, pre-mRNA-processing factor 40
2 Sobic.002G284901 - -
3 Sobic.010G073300 expressed protein -
4 Sobic.001G525000 polygalacturonase, putative, expressed -
5 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
6 Sobic.003G120400 expressed protein -
7 Sobic.002G387100 X8 domain containing protein, expressed -
8 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
9 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
10 Sobic.003G099500 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.001G460800 nucleotidyltransferase, putative, expressed -
12 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.004G330400 expressed protein -
14 Sobic.001G016900 RNA-binding protein Luc7-like, putative, expressed -
15 Sobic.003G200501 - K11252: histone H2B
16 Sobic.007G122300 - -
17 Sobic.003G367401 - -
18 Sobic.004G239000 - -
19 Sobic.007G093400 - -
20 Sobic.001G130900 expressed protein -


Gene co-expression network
sample Sobic010G036000 Sobic010G036000 Sobic003G179100 Sobic003G179100 Sobic010G036000--Sobic003G179100 Sobic002G284901 Sobic002G284901 Sobic010G036000--Sobic002G284901 Sobic010G073300 Sobic010G073300 Sobic010G036000--Sobic010G073300 Sobic001G525000 Sobic001G525000 Sobic010G036000--Sobic001G525000 Sobic002G430200 Sobic002G430200 Sobic010G036000--Sobic002G430200 Sobic003G120400 Sobic003G120400 Sobic010G036000--Sobic003G120400 Sobic002G387100 Sobic002G387100 Sobic010G036000--Sobic002G387100 Sobic002G320900 Sobic002G320900 Sobic010G036000--Sobic002G320900 Sobic006G065700 Sobic006G065700 Sobic010G036000--Sobic006G065700 Sobic003G179100--Sobic010G073300 Sobic003G179100--Sobic002G284901 Sobic003G179100--Sobic002G320900 Sobic003G179100--Sobic003G120400 Sobic003G179100--Sobic001G525000 Sobic003G179100--Sobic006G065700 Sobic003G179100--Sobic002G430200 Sobic003G179100--Sobic002G387100 Sobic001G519300 Sobic001G519300 Sobic003G179100--Sobic001G519300 Sobic002G284901--Sobic002G320900 Sobic003G200501 Sobic003G200501 Sobic002G284901--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic002G284901--Sobic002G210200 Sobic002G284901--Sobic003G120400 Sobic002G284901--Sobic001G525000 Sobic007G093400 Sobic007G093400 Sobic002G284901--Sobic007G093400 Sobic002G284901--Sobic006G065700 Sobic003G067500 Sobic003G067500 Sobic002G284901--Sobic003G067500 Sobic002G284901--Sobic002G430200 Sobic010G073300--Sobic002G284901 Sobic010G073300--Sobic003G120400 Sobic010G073300--Sobic001G525000 Sobic010G073300--Sobic002G320900 Sobic010G073300--Sobic002G430200 Sobic001G130900 Sobic001G130900 Sobic010G073300--Sobic001G130900 Sobic010G073300--Sobic003G200501 Sobic010G073300--Sobic002G387100 Sobic010G073300--Sobic002G210200 Sobic001G525000--Sobic003G120400 Sobic001G525000--Sobic002G320900 Sobic001G525000--Sobic002G430200 Sobic001G525000--Sobic002G284901 Sobic003G367401 Sobic003G367401 Sobic001G525000--Sobic003G367401 Sobic001G525000--Sobic002G387100 Sobic001G525000--Sobic002G210200 Sobic001G525000--Sobic003G200501 Sobic001G525000--Sobic007G093400 Sobic002G430200--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic002G430200--Sobic007G122300 Sobic003G099500 Sobic003G099500 Sobic002G430200--Sobic003G099500 Sobic002G430200--Sobic003G367401 Sobic002G430200--Sobic001G525000 Sobic004G239000 Sobic004G239000 Sobic002G430200--Sobic004G239000 Sobic002G430200--Sobic003G120400 Sobic010G201000 Sobic010G201000 Sobic002G430200--Sobic010G201000 Sobic002G284800 Sobic002G284800 Sobic002G430200--Sobic002G284800 Sobic003G120400--Sobic001G525000 Sobic003G120400--Sobic002G320900 Sobic003G120400--Sobic007G093400 Sobic003G120400--Sobic002G284901 Sobic003G120400--Sobic003G200501 Sobic003G120400--Sobic002G210200 Sobic003G120400--Sobic001G130900 Sobic003G120400--Sobic002G430200 Sobic003G120400--Sobic003G367401 Sobic002G387100--Sobic002G430200 Sobic002G387100--Sobic007G122300 Sobic002G387100--Sobic003G099500 Sobic002G387100--Sobic004G239000 Sobic002G387100--Sobic001G525000 Sobic002G387100--Sobic003G367401 Sobic002G387100--Sobic002G284800 Sobic003G368150 Sobic003G368150 Sobic002G387100--Sobic003G368150 Sobic002G387100--Sobic003G120400 Sobic002G320900--Sobic002G284901 Sobic002G320900--Sobic001G525000 Sobic002G320900--Sobic003G120400 Sobic002G320900--Sobic002G210200 Sobic002G320900--Sobic003G200501 Sobic002G320900--Sobic007G093400 Sobic002G320900--Sobic006G065700 Sobic001G460800 Sobic001G460800 Sobic002G320900--Sobic001G460800 Sobic002G320900--Sobic003G367401 Sobic006G065700--Sobic002G320900 Sobic006G065700--Sobic002G284901 Sobic006G065700--Sobic007G093400 Sobic006G065700--Sobic002G210200 Sobic006G065700--Sobic003G200501 Sobic006G065700--Sobic003G120400 Sobic006G065700--Sobic001G525000 Sobic010G074980 Sobic010G074980 Sobic006G065700--Sobic010G074980 Sobic003G427500 Sobic003G427500 Sobic006G065700--Sobic003G427500
Octagon: transcription factors


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