Gene annotation
Transcriptome id Sobic.004G284400.1
Synonym Sb04g032040, DNA binding with One Finger, SbDof16
Functional annotation Homologous to Dof genes in Arabidopsis and rice. (PubMedID : 21161392)
dof zinc finger domain containing protein, putative, expressed
UniProt A0A194YT63 , C5Y1A1 , R4NF02
Pfam PF02701
Panther DB PTHR31992 PTHR31992:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT3G61850 : Dof-type zinc finger DNA-binding family protein
RAP-DB (Rice) LOC_Os02g45200.1 : dof zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a049197 , Zm00025a004485 , Zm00025a009285 , Zm00025a047370 , Zm00025a017356 , Zm00025a007115 , Zm00025a032602 , Zm00025a007401 , Zm00025a021490 , Zm00025a056781 , Zm00025a023031 , Zm00025a052752 , Zm00025a006464 , Zm00025a039572 , Zm00025a016727 , Zm00025a010183 , Zm00025a002866 , Zm00025a032286 , Zm00025a014147 , Zm00025a021740 , Zm00025a017302 , Zm00025a001854 , Zm00025a000851 , Zm00025a021884 , Zm00025a032473 , Zm00025a057389 , Zm00025a014756 , Zm00025a008288 , Zm00025a004967 , Zm00025a048181 , Zm00025a026723 , Zm00025a043793
Brachypodium KQK22335 , KQK14158 , PNT73247 , PNT69224 , KQK00955 , KQK16070 , KQK13036 , PNT65625 , PNT65624 , KQJ98766 , PNT69485 , KQJ90639 , KQK03138 , KQK06036 , KQK14319 , KQK23432 , KQK00737 , KQJ84092 , KQK00738
Barley HORVU6Hr1G065250.4 , HORVU6Hr1G065250.5 , HORVU6Hr1G065250.6 , HORVU6Hr1G065250.7 , HORVU2Hr1G119110.7 , HORVU5Hr1G048700.1 , HORVU6Hr1G065250.2 , HORVU6Hr1G065250.3 , HORVU2Hr1G119110.9 , HORVU2Hr1G119110.8 , HORVU6Hr1G065250.8 , HORVU6Hr1G065250.9 , HORVU2Hr1G119110.3 , HORVU2Hr1G013060.1 , HORVU5Hr1G097600.1 , HORVU6Hr1G065250.1 , HORVU2Hr1G119110.6 , HORVU2Hr1G119110.5 , HORVU6Hr1G065250.10 , HORVU2Hr1G119160.6 , HORVU2Hr1G119160.4 , HORVU2Hr1G119160.2 , HORVU2Hr1G119160.3 , HORVU2Hr1G119160.1 , HORVU5Hr1G097620.1 , HORVU2Hr1G095390.2 , HORVU2Hr1G095390.1 , HORVU7Hr1G043250.2 , HORVU1Hr1G044560.1 , HORVU4Hr1G074990.3 , HORVU4Hr1G074990.2 , HORVU4Hr1G074990.1 , HORVU2Hr1G119110.4 , HORVU1Hr1G074140.1 , HORVU3Hr1G083460.1 , HORVU4Hr1G013890.1
Wheat TraesCS5B02G154100 , TraesCS2A02G402200 , TraesCS4B02G206800 , TraesCS2D02G563000 , TraesCS4A02G097800 , TraesCS5A02G155900 , TraesCS4B02G286400 , TraesCS2D02G563400 , TraesCS6D02G236700 , TraesCS2D02G563200 , TraesCS6B02G301500 , TraesCS4D02G285100 , TraesCS2B02G592600 , TraesCS4D02G207600 , TraesCS2D02G399500 , TraesCS2B02G592900 , TraesCS2A02G590800 , TraesCS2B02G592800 , TraesCS4A02G017700 , TraesCS6A02G274000 , TraesCS2B02G592700 , TraesCS2A02G591200 , TraesCS5D02G161000 , TraesCS5B02G492600 , TraesCS6D02G254200 , TraesCS6B02G270100 , TraesCS2B02G420400 , TraesCS6A02G255500
Populus PNT43441


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G285300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
2 Sobic.004G230900 RNA recognition motif containing protein, putative, expressed -
3 Sobic.008G061000 expressed protein -
4 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
5 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
6 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
7 Sobic.005G102100 chalcone synthase, putative, expressed -
8 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
9 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
10 Sobic.004G330400 expressed protein -
11 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
12 Sobic.002G284800 expressed protein -
13 Sobic.006G197000 heavy-metal-associated domain-containing protein, putative, expressed -
14 Sobic.007G122300 - -
15 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
16 Sobic.K044200 - -
17 Sobic.003G368150 - -
18 Sobic.002G425900 expressed protein -
19 Sobic.002G387100 X8 domain containing protein, expressed -
20 Sobic.010G114400 expressed protein -


Gene co-expression network
sample Sobic004G284400 Sobic004G284400 Sobic002G285300 Sobic002G285300 Sobic004G284400--Sobic002G285300 Sobic004G230900 Sobic004G230900 Sobic004G284400--Sobic004G230900 Sobic008G061000 Sobic008G061000 Sobic004G284400--Sobic008G061000 Sobic009G154000 Sobic009G154000 Sobic004G284400--Sobic009G154000 Sobic004G128600 Sobic004G128600 Sobic004G284400--Sobic004G128600 Sobic001G200500 Sobic001G200500 Sobic004G284400--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G284400--Sobic005G102100 Sobic001G193400 Sobic001G193400 Sobic004G284400--Sobic001G193400 Sobic008G133100 Sobic008G133100 Sobic004G284400--Sobic008G133100 Sobic002G285300--Sobic004G284400 Sobic003G397000 Sobic003G397000 Sobic002G285300--Sobic003G397000 Sobic001G017900 Sobic001G017900 Sobic002G285300--Sobic001G017900 Sobic006G247500 Sobic006G247500 Sobic002G285300--Sobic006G247500 Sobic002G285300--Sobic009G154000 Sobic002G320200 Sobic002G320200 Sobic002G285300--Sobic002G320200 Sobic010G036000 Sobic010G036000 Sobic002G285300--Sobic010G036000 SobicK044200 SobicK044200 Sobic002G285300--SobicK044200 Sobic006G192400 Sobic006G192400 Sobic002G285300--Sobic006G192400 Sobic003G350100 Sobic003G350100 Sobic004G230900--Sobic003G350100 Sobic002G403400 Sobic002G403400 Sobic004G230900--Sobic002G403400 Sobic003G067300 Sobic003G067300 Sobic004G230900--Sobic003G067300 Sobic004G230900--Sobic001G193400 Sobic003G067500 Sobic003G067500 Sobic004G230900--Sobic003G067500 Sobic004G230900--Sobic008G133100 Sobic004G265400 Sobic004G265400 Sobic004G230900--Sobic004G265400 Sobic004G230900--Sobic001G200500 Sobic002G056300 Sobic002G056300 Sobic004G230900--Sobic002G056300 Sobic008G061000--Sobic001G200500 Sobic004G329100 Sobic004G329100 Sobic008G061000--Sobic004G329100 Sobic008G061000--Sobic004G128600 Sobic006G197000 Sobic006G197000 Sobic008G061000--Sobic006G197000 Sobic008G061000--Sobic008G133100 Sobic001G541900 Sobic001G541900 Sobic008G061000--Sobic001G541900 Sobic008G061000--Sobic001G193400 Sobic007G001300 Sobic007G001300 Sobic008G061000--Sobic007G001300 Sobic008G061000--Sobic003G350100 Sobic009G154000--SobicK044200 Sobic002G425900 Sobic002G425900 Sobic009G154000--Sobic002G425900 Sobic009G154000--Sobic004G128600 Sobic010G114400 Sobic010G114400 Sobic009G154000--Sobic010G114400 Sobic004G330400 Sobic004G330400 Sobic009G154000--Sobic004G330400 Sobic010G224800 Sobic010G224800 Sobic009G154000--Sobic010G224800 Sobic002G284800 Sobic002G284800 Sobic009G154000--Sobic002G284800 Sobic001G255700 Sobic001G255700 Sobic009G154000--Sobic001G255700 Sobic003G368150 Sobic003G368150 Sobic009G154000--Sobic003G368150 Sobic004G128600--Sobic006G197000 Sobic004G128600--Sobic002G425900 Sobic004G128600--Sobic010G224800 Sobic004G128600--Sobic010G114400 Sobic004G128600--Sobic009G154000 Sobic004G128600--Sobic007G001300 Sobic003G201400 Sobic003G201400 Sobic004G128600--Sobic003G201400 Sobic004G128600--Sobic001G200500 Sobic004G128600--Sobic005G102100 Sobic001G200500--Sobic008G133100 Sobic001G200500--Sobic010G224800 Sobic001G200500--Sobic007G001300 Sobic009G031100 Sobic009G031100 Sobic001G200500--Sobic009G031100 Sobic001G200500--Sobic001G255700 Sobic001G200500--Sobic002G284800 Sobic003G109400 Sobic003G109400 Sobic001G200500--Sobic003G109400 Sobic002G156300 Sobic002G156300 Sobic001G200500--Sobic002G156300 Sobic001G200500--Sobic003G368150 Sobic005G102100--Sobic008G133100 Sobic005G102100--Sobic004G330400 Sobic005G102100--Sobic002G284800 Sobic005G102100--Sobic002G425900 Sobic005G102100--Sobic001G255700 Sobic005G102100--Sobic001G200500 Sobic005G102100--Sobic010G224800 Sobic005G102100--Sobic003G368150 Sobic005G102100--Sobic007G001300 Sobic001G193400--Sobic003G350100 Sobic001G193400--Sobic003G067300 Sobic001G193400--Sobic004G265400 Sobic007G149600 Sobic007G149600 Sobic001G193400--Sobic007G149600 Sobic003G200501 Sobic003G200501 Sobic001G193400--Sobic003G200501 Sobic001G193400--Sobic003G067500 Sobic002G210200 Sobic002G210200 Sobic001G193400--Sobic002G210200 Sobic002G387100 Sobic002G387100 Sobic001G193400--Sobic002G387100 Sobic002G430200 Sobic002G430200 Sobic001G193400--Sobic002G430200 Sobic008G133100--Sobic002G284800 Sobic008G133100--Sobic001G255700 Sobic008G133100--Sobic003G368150 Sobic001G441800 Sobic001G441800 Sobic008G133100--Sobic001G441800 Sobic004G239000 Sobic004G239000 Sobic008G133100--Sobic004G239000 Sobic008G131800 Sobic008G131800 Sobic008G133100--Sobic008G131800 Sobic003G105300 Sobic003G105300 Sobic008G133100--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic008G133100--Sobic004G197300 Sobic008G133100--Sobic001G200500
Octagon: transcription factors


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