Gene annotation
Transcriptome id Sobic.005G102100.2,Sobic.005G102100.1
Synonym CHS, Sb05g008850, ATCHS, TT4
Functional annotation chalcone synthase, putative, expressed
UniProt C5Y1V7 , A0A1B6PRG2
Pfam PF08541 PF08545
Panther DB PTHR11877 PTHR11877:SF21
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0006633fatty acid biosynthetic process GO:00043153-oxoacyl-[acyl-carrier-protein] synthase activity


Orthologs (automatic annotation)
TAIR AT5G13930 : Chalcone and stilbene synthase family protein
RAP-DB (Rice) LOC_Os04g01354.1 : chalcone synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU2Hr1G005220.3 , HORVU2Hr1G005220.2 , HORVU2Hr1G005220.5 , HORVU2Hr1G005220.4 , HORVU4Hr1G004810.2 , HORVU6Hr1G074060.1 , HORVU6Hr1G074060.2 , HORVU2Hr1G116390.1 , HORVU2Hr1G116390.2 , HORVU2Hr1G116390.3 , HORVU2Hr1G116390.4
Wheat TraesCS6A02G298400 , TraesCS6D02G278200 , TraesCS2D02G034500 , TraesCS2B02G558400 , TraesCS2B02G558400 , TraesCS2A02G035300 , TraesCS6B02G327900 , TraesCS2B02G613100 , TraesCS2A02G527700 , TraesCS2A02G527700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.004G330400 expressed protein -
3 Sobic.002G284800 expressed protein -
4 Sobic.002G425900 expressed protein -
5 Sobic.001G255700 - -
6 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
7 Sobic.010G224800 patellin-5, putative, expressed -
8 Sobic.003G368150 - -
9 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
10 Sobic.003G109400 - -
11 Sobic.009G163500 - -
12 Sobic.002G156300 - -
13 Sobic.003G105300 - -
14 Sobic.004G197300 - -
15 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
16 Sobic.010G179150 - -
17 Sobic.010G114400 expressed protein -
18 Sobic.004G239000 - -
19 Sobic.008G131800 zinc knuckle family protein, expressed -
20 Sobic.001G407000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@ proteins of unknown function domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G102100 Sobic005G102100 Sobic008G133100 Sobic008G133100 Sobic005G102100--Sobic008G133100 Sobic004G330400 Sobic004G330400 Sobic005G102100--Sobic004G330400 Sobic002G284800 Sobic002G284800 Sobic005G102100--Sobic002G284800 Sobic002G425900 Sobic002G425900 Sobic005G102100--Sobic002G425900 Sobic001G255700 Sobic001G255700 Sobic005G102100--Sobic001G255700 Sobic001G200500 Sobic001G200500 Sobic005G102100--Sobic001G200500 Sobic010G224800 Sobic010G224800 Sobic005G102100--Sobic010G224800 Sobic003G368150 Sobic003G368150 Sobic005G102100--Sobic003G368150 Sobic007G001300 Sobic007G001300 Sobic005G102100--Sobic007G001300 Sobic008G133100--Sobic002G284800 Sobic008G133100--Sobic001G255700 Sobic008G133100--Sobic003G368150 Sobic001G441800 Sobic001G441800 Sobic008G133100--Sobic001G441800 Sobic004G239000 Sobic004G239000 Sobic008G133100--Sobic004G239000 Sobic008G131800 Sobic008G131800 Sobic008G133100--Sobic008G131800 Sobic003G105300 Sobic003G105300 Sobic008G133100--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic008G133100--Sobic004G197300 Sobic008G133100--Sobic001G200500 Sobic004G330400--Sobic002G284800 Sobic004G330400--Sobic001G255700 Sobic004G330400--Sobic003G105300 Sobic004G330400--Sobic003G368150 Sobic004G330400--Sobic008G133100 Sobic004G330400--Sobic002G425900 Sobic004G330400--Sobic010G224800 Sobic003G109400 Sobic003G109400 Sobic004G330400--Sobic003G109400 Sobic009G163500 Sobic009G163500 Sobic004G330400--Sobic009G163500 Sobic002G284800--Sobic003G368150 Sobic002G284800--Sobic001G255700 Sobic002G284800--Sobic004G239000 Sobic002G284800--Sobic008G131800 Sobic002G284800--Sobic008G133100 Sobic003G099500 Sobic003G099500 Sobic002G284800--Sobic003G099500 Sobic002G387100 Sobic002G387100 Sobic002G284800--Sobic002G387100 Sobic007G122300 Sobic007G122300 Sobic002G284800--Sobic007G122300 Sobic002G284800--Sobic003G105300 Sobic002G425900--Sobic010G224800 Sobic002G425900--Sobic002G284800 Sobic002G425900--Sobic001G255700 Sobic002G425900--Sobic003G105300 Sobic010G114400 Sobic010G114400 Sobic002G425900--Sobic010G114400 Sobic002G425900--Sobic003G368150 Sobic002G425900--Sobic008G133100 Sobic002G425900--Sobic003G109400 Sobic002G425900--Sobic007G001300 Sobic001G255700--Sobic002G284800 Sobic001G255700--Sobic003G368150 Sobic001G255700--Sobic008G131800 Sobic001G255700--Sobic004G239000 Sobic001G255700--Sobic008G133100 Sobic001G255700--Sobic003G105300 Sobic001G255700--Sobic004G197300 Sobic010G179150 Sobic010G179150 Sobic001G255700--Sobic010G179150 Sobic001G255700--Sobic009G163500 Sobic001G200500--Sobic008G133100 Sobic001G200500--Sobic010G224800 Sobic001G200500--Sobic007G001300 Sobic009G031100 Sobic009G031100 Sobic001G200500--Sobic009G031100 Sobic001G200500--Sobic001G255700 Sobic001G200500--Sobic002G284800 Sobic001G200500--Sobic003G109400 Sobic002G156300 Sobic002G156300 Sobic001G200500--Sobic002G156300 Sobic001G200500--Sobic003G368150 Sobic010G224800--Sobic010G114400 Sobic010G224800--Sobic007G001300 Sobic010G224800--Sobic003G109400 Sobic010G224800--Sobic002G156300 Sobic010G224800--Sobic009G031100 Sobic010G224800--Sobic002G425900 Sobic010G224800--Sobic003G105300 Sobic010G224800--Sobic004G197300 Sobic010G224800--Sobic009G163500 Sobic003G368150--Sobic002G284800 Sobic003G368150--Sobic001G255700 Sobic003G368150--Sobic008G131800 Sobic003G368150--Sobic007G122300 Sobic003G368150--Sobic004G239000 Sobic003G368150--Sobic008G133100 Sobic003G368150--Sobic002G387100 Sobic003G368150--Sobic004G197300 Sobic003G368150--Sobic003G099500 Sobic007G001300--Sobic002G156300 Sobic007G001300--Sobic010G224800 Sobic007G001300--Sobic010G114400 Sobic007G001300--Sobic003G109400 Sobic007G001300--Sobic009G031100 Sobic007G001300--Sobic004G197300 Sobic007G001300--Sobic003G105300 Sobic008G020300 Sobic008G020300 Sobic007G001300--Sobic008G020300 Sobic007G001300--Sobic010G179150
Octagon: transcription factors


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