Gene annotation
Transcriptome id Sobic.005G005500.2,Sobic.005G005500.1
Synonym Sb05g000640
Functional annotation macrophage migration inhibitory factor, putative, expressed
UniProt C5Y309 , A0A1Z5RGP8
Pfam PF01187
Panther DB PTHR11954 PTHR11954:SF20
NCBI CDD KOG1759; Macrophage migration inhibitory factor
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01650 : Tautomerase/MIF superfamily protein
RAP-DB (Rice) LOC_Os12g01680.1,LOC_Os11g01600.1 : macrophage migration inhibitory factor, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G047530.3 , HORVU5Hr1G047530.1
Wheat TraesCS5D02G156900 , TraesCS5D02G156900 , TraesCS5B02G150300 , TraesCS5A02G151700 , TraesCS5A02G151700 , TraesCS5B02G150300
Populus -


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cDNA sequences
Sobic.005G005500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G139900 expressed protein -
2 Sobic.004G072000 ribosome, putative, expressed -
3 Sobic.006G204000 "Ascorbate peroxidase,heme binding / peroxidase (Os)"(PubMedID : 27208977)@Ascorbate peroxidasel heme binding / peroxidase (Os)(PubMedID : 27208977)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
4 Sobic.003G229150 - -
5 Sobic.004G330400 expressed protein -
6 Sobic.010G244600 nifU, putative, expressed -
7 Sobic.002G186600 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
8 Sobic.005G102100 chalcone synthase, putative, expressed -
9 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
10 Sobic.004G034000 5-AMP-activated protein kinase beta-1 subunit-related, putative, expressed -
11 Sobic.007G013500 expressed protein -
12 Sobic.002G403400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.001G115800 expressed protein -
14 Sobic.010G258700 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
15 Sobic.003G396900 expressed protein -
16 Sobic.002G276700 protein of unknown function containing protein, expressed -
17 Sobic.006G162700 - -
18 Sobic.007G204400 expressed protein -
19 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
20 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G005500 Sobic005G005500 Sobic008G139900 Sobic008G139900 Sobic005G005500--Sobic008G139900 Sobic004G072000 Sobic004G072000 Sobic005G005500--Sobic004G072000 Sobic006G204000 Sobic006G204000 Sobic005G005500--Sobic006G204000 Sobic003G229150 Sobic003G229150 Sobic005G005500--Sobic003G229150 Sobic004G330400 Sobic004G330400 Sobic005G005500--Sobic004G330400 Sobic010G244600 Sobic010G244600 Sobic005G005500--Sobic010G244600 Sobic002G186600 Sobic002G186600 Sobic005G005500--Sobic002G186600 Sobic005G102100 Sobic005G102100 Sobic005G005500--Sobic005G102100 Sobic001G543500 Sobic001G543500 Sobic005G005500--Sobic001G543500 Sobic008G139900--Sobic004G330400 Sobic001G493800 Sobic001G493800 Sobic008G139900--Sobic001G493800 SobicK044200 SobicK044200 Sobic008G139900--SobicK044200 Sobic008G028500 Sobic008G028500 Sobic008G139900--Sobic008G028500 Sobic008G139900--Sobic003G229150 Sobic008G139900--Sobic005G102100 Sobic002G206200 Sobic002G206200 Sobic008G139900--Sobic002G206200 Sobic008G139900--Sobic006G204000 Sobic003G396900 Sobic003G396900 Sobic008G139900--Sobic003G396900 Sobic010G208000 Sobic010G208000 Sobic004G072000--Sobic010G208000 Sobic004G034500 Sobic004G034500 Sobic004G072000--Sobic004G034500 Sobic004G072000--Sobic010G244600 Sobic004G072000--Sobic008G139900 Sobic007G204400 Sobic007G204400 Sobic004G072000--Sobic007G204400 Sobic001G115800 Sobic001G115800 Sobic004G072000--Sobic001G115800 Sobic008G131200 Sobic008G131200 Sobic004G072000--Sobic008G131200 Sobic004G072000--Sobic006G204000 Sobic010G258700 Sobic010G258700 Sobic004G072000--Sobic010G258700 Sobic003G309600 Sobic003G309600 Sobic006G204000--Sobic003G309600 Sobic006G204000--Sobic001G115800 Sobic006G204000--Sobic010G258700 Sobic006G204000--Sobic008G139900 Sobic003G120400 Sobic003G120400 Sobic006G204000--Sobic003G120400 Sobic003G099500 Sobic003G099500 Sobic006G204000--Sobic003G099500 Sobic002G284901 Sobic002G284901 Sobic006G204000--Sobic002G284901 Sobic001G460800 Sobic001G460800 Sobic006G204000--Sobic001G460800 Sobic002G320900 Sobic002G320900 Sobic006G204000--Sobic002G320900 Sobic003G229150--Sobic008G139900 Sobic003G229150--Sobic001G493800 Sobic003G229150--Sobic004G330400 Sobic003G229150--Sobic005G102100 Sobic006G162700 Sobic006G162700 Sobic003G229150--Sobic006G162700 Sobic006G136600 Sobic006G136600 Sobic003G229150--Sobic006G136600 Sobic003G229150--Sobic003G099500 Sobic003G229150--Sobic008G028500 Sobic003G229150--Sobic003G396900 Sobic002G284800 Sobic002G284800 Sobic004G330400--Sobic002G284800 Sobic001G255700 Sobic001G255700 Sobic004G330400--Sobic001G255700 Sobic003G105300 Sobic003G105300 Sobic004G330400--Sobic003G105300 Sobic003G368150 Sobic003G368150 Sobic004G330400--Sobic003G368150 Sobic008G133100 Sobic008G133100 Sobic004G330400--Sobic008G133100 Sobic002G425900 Sobic002G425900 Sobic004G330400--Sobic002G425900 Sobic010G224800 Sobic010G224800 Sobic004G330400--Sobic010G224800 Sobic003G109400 Sobic003G109400 Sobic004G330400--Sobic003G109400 Sobic009G163500 Sobic009G163500 Sobic004G330400--Sobic009G163500 Sobic010G244600--Sobic007G204400 Sobic010G244600--Sobic004G072000 Sobic005G208500 Sobic005G208500 Sobic010G244600--Sobic005G208500 Sobic003G336200 Sobic003G336200 Sobic010G244600--Sobic003G336200 Sobic010G244600--Sobic005G005500 Sobic010G244600--Sobic006G204000 Sobic010G244600--Sobic003G309600 Sobic007G013500 Sobic007G013500 Sobic010G244600--Sobic007G013500 Sobic010G244600--Sobic001G543500 Sobic002G186600--Sobic008G139900 Sobic002G186600--Sobic004G330400 Sobic002G186600--Sobic003G396900 Sobic002G186600--Sobic001G493800 Sobic002G186600--Sobic006G162700 Sobic002G186600--Sobic002G206200 Sobic009G202900 Sobic009G202900 Sobic002G186600--Sobic009G202900 Sobic002G186600--Sobic003G109400 Sobic002G231800 Sobic002G231800 Sobic002G186600--Sobic002G231800 Sobic005G102100--Sobic008G133100 Sobic005G102100--Sobic004G330400 Sobic005G102100--Sobic002G284800 Sobic005G102100--Sobic002G425900 Sobic005G102100--Sobic001G255700 Sobic001G200500 Sobic001G200500 Sobic005G102100--Sobic001G200500 Sobic005G102100--Sobic010G224800 Sobic005G102100--Sobic003G368150 Sobic007G001300 Sobic007G001300 Sobic005G102100--Sobic007G001300 Sobic002G088200 Sobic002G088200 Sobic001G543500--Sobic002G088200 Sobic001G543500--Sobic004G072000 Sobic001G543500--Sobic008G139900 Sobic001G516800 Sobic001G516800 Sobic001G543500--Sobic001G516800 Sobic001G543500--Sobic010G208000 Sobic001G543500--Sobic004G034500 Sobic004G033900 Sobic004G033900 Sobic001G543500--Sobic004G033900 Sobic001G543500--Sobic005G005500 Sobic002G314200 Sobic002G314200 Sobic001G543500--Sobic002G314200
Octagon: transcription factors


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