Gene annotation
Transcriptome id Sobic.007G204400.2
Synonym Sb07g027180
Functional annotation expressed protein
UniProt C5YJA8
Pfam -
Panther DB PTHR10168 PTHR10168:SF87
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24395 : chaperone protein dnaJ-related
RAP-DB (Rice) LOC_Os08g40919.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G051760.1
Wheat TraesCS7B02G139600 , TraesCS7A02G251500 , TraesCS7D02G249600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G244600 nifU, putative, expressed -
2 Sobic.004G072000 ribosome, putative, expressed -
3 Sobic.005G208500 ankyrin repeat family protein, putative, expressed -
4 Sobic.006G204000 "Ascorbate peroxidase,heme binding / peroxidase (Os)"(PubMedID : 27208977)@Ascorbate peroxidasel heme binding / peroxidase (Os)(PubMedID : 27208977)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
5 Sobic.006G127300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G264700 expressed protein -
7 Sobic.009G125500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.004G023400 expressed protein -
9 Sobic.009G237800 expressed protein -
10 Sobic.005G128100 acyl carrier protein, putative, expressed -
11 Sobic.006G118000 expressed protein -
12 Sobic.005G005500 macrophage migration inhibitory factor, putative, expressed -
13 Sobic.008G139900 expressed protein -
14 Sobic.003G309600 wax synthase, putative, expressed -
15 Sobic.003G309700 decarboxylase, putative, expressed K01592: tyrosine decarboxylase
16 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -
17 Sobic.010G258700 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
18 Sobic.003G239300 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.001G115800 expressed protein -
20 Sobic.010G208000 ribosomal protein L35, putative, expressed K02916: RP-L35, MRPL35, large subunit ribosomal protein L35


Gene co-expression network
sample Sobic007G204400 Sobic007G204400 Sobic010G244600 Sobic010G244600 Sobic007G204400--Sobic010G244600 Sobic004G072000 Sobic004G072000 Sobic007G204400--Sobic004G072000 Sobic005G208500 Sobic005G208500 Sobic007G204400--Sobic005G208500 Sobic006G204000 Sobic006G204000 Sobic007G204400--Sobic006G204000 Sobic006G127300 Sobic006G127300 Sobic007G204400--Sobic006G127300 Sobic003G264700 Sobic003G264700 Sobic007G204400--Sobic003G264700 Sobic009G125500 Sobic009G125500 Sobic007G204400--Sobic009G125500 Sobic004G023400 Sobic004G023400 Sobic007G204400--Sobic004G023400 Sobic009G237800 Sobic009G237800 Sobic007G204400--Sobic009G237800 Sobic010G244600--Sobic007G204400 Sobic010G244600--Sobic004G072000 Sobic010G244600--Sobic005G208500 Sobic003G336200 Sobic003G336200 Sobic010G244600--Sobic003G336200 Sobic005G005500 Sobic005G005500 Sobic010G244600--Sobic005G005500 Sobic010G244600--Sobic006G204000 Sobic003G309600 Sobic003G309600 Sobic010G244600--Sobic003G309600 Sobic007G013500 Sobic007G013500 Sobic010G244600--Sobic007G013500 Sobic001G543500 Sobic001G543500 Sobic010G244600--Sobic001G543500 Sobic010G208000 Sobic010G208000 Sobic004G072000--Sobic010G208000 Sobic004G034500 Sobic004G034500 Sobic004G072000--Sobic004G034500 Sobic004G072000--Sobic010G244600 Sobic008G139900 Sobic008G139900 Sobic004G072000--Sobic008G139900 Sobic004G072000--Sobic007G204400 Sobic001G115800 Sobic001G115800 Sobic004G072000--Sobic001G115800 Sobic008G131200 Sobic008G131200 Sobic004G072000--Sobic008G131200 Sobic004G072000--Sobic006G204000 Sobic010G258700 Sobic010G258700 Sobic004G072000--Sobic010G258700 Sobic005G208500--Sobic003G309600 Sobic005G208500--Sobic006G204000 Sobic001G378550 Sobic001G378550 Sobic005G208500--Sobic001G378550 Sobic005G208500--Sobic010G244600 Sobic002G218200 Sobic002G218200 Sobic005G208500--Sobic002G218200 Sobic005G208500--Sobic009G125500 Sobic004G124800 Sobic004G124800 Sobic005G208500--Sobic004G124800 Sobic001G139600 Sobic001G139600 Sobic005G208500--Sobic001G139600 Sobic010G206700 Sobic010G206700 Sobic005G208500--Sobic010G206700 Sobic006G204000--Sobic003G309600 Sobic006G204000--Sobic001G115800 Sobic006G204000--Sobic010G258700 Sobic006G204000--Sobic008G139900 Sobic003G120400 Sobic003G120400 Sobic006G204000--Sobic003G120400 Sobic003G099500 Sobic003G099500 Sobic006G204000--Sobic003G099500 Sobic002G284901 Sobic002G284901 Sobic006G204000--Sobic002G284901 Sobic001G460800 Sobic001G460800 Sobic006G204000--Sobic001G460800 Sobic002G320900 Sobic002G320900 Sobic006G204000--Sobic002G320900 Sobic005G128100 Sobic005G128100 Sobic006G127300--Sobic005G128100 Sobic003G230400 Sobic003G230400 Sobic006G127300--Sobic003G230400 Sobic007G205500 Sobic007G205500 Sobic006G127300--Sobic007G205500 Sobic006G127300--Sobic007G204400 Sobic001G010100 Sobic001G010100 Sobic006G127300--Sobic001G010100 Sobic001G413600 Sobic001G413600 Sobic006G127300--Sobic001G413600 Sobic009G130700 Sobic009G130700 Sobic006G127300--Sobic009G130700 Sobic007G004600 Sobic007G004600 Sobic006G127300--Sobic007G004600 Sobic009G179800 Sobic009G179800 Sobic006G127300--Sobic009G179800 Sobic003G264700--Sobic004G023400 Sobic004G204500 Sobic004G204500 Sobic003G264700--Sobic004G204500 Sobic003G264700--Sobic007G204400 Sobic002G088200 Sobic002G088200 Sobic003G264700--Sobic002G088200 Sobic003G309700 Sobic003G309700 Sobic003G264700--Sobic003G309700 Sobic003G264700--Sobic009G237800 Sobic010G042400 Sobic010G042400 Sobic003G264700--Sobic010G042400 Sobic001G381900 Sobic001G381900 Sobic003G264700--Sobic001G381900 Sobic003G264700--Sobic001G543500 Sobic009G125500--Sobic005G208500 Sobic009G125500--Sobic010G206700 Sobic009G125500--Sobic003G309600 Sobic010G036000 Sobic010G036000 Sobic009G125500--Sobic010G036000 Sobic009G125500--Sobic001G139600 Sobic009G125500--Sobic002G218200 Sobic010G158100 Sobic010G158100 Sobic009G125500--Sobic010G158100 Sobic005G232200 Sobic005G232200 Sobic009G125500--Sobic005G232200 Sobic009G125500--Sobic007G204400 Sobic004G023400--Sobic004G204500 Sobic004G023400--Sobic003G264700 Sobic004G023400--Sobic003G309700 Sobic003G132300 Sobic003G132300 Sobic004G023400--Sobic003G132300 Sobic004G023400--Sobic007G204400 Sobic004G023400--Sobic009G237800 Sobic004G023400--Sobic006G127300 Sobic004G023400--Sobic009G179800 Sobic004G023400--Sobic010G208000 Sobic002G077000 Sobic002G077000 Sobic009G237800--Sobic002G077000 Sobic009G237800--Sobic004G204500 Sobic009G237800--Sobic004G023400 Sobic009G237800--Sobic007G204400 Sobic009G237800--Sobic005G128100 Sobic009G237800--Sobic003G264700 Sobic001G337600 Sobic001G337600 Sobic009G237800--Sobic001G337600 Sobic009G237800--Sobic004G072000 Sobic009G237800--Sobic010G244600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.