Gene annotation
Transcriptome id Sobic.003G309700.1
Synonym Sb03g035800
Functional annotation decarboxylase, putative, expressed
UniProt C5XKZ5
Pfam PF00282
Panther DB PTHR11999 PTHR11999:SF96
NCBI CDD -
KEGG Orthology K01592; tyrosine decarboxylase
Gene Ontology GO:0016831; carboxy-lyase activity


Orthologs (automatic annotation)
TAIR AT2G20340 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os01g56380.1 : decarboxylase, putative, expressed
MaizeGDB (Corn) Zm00025a000975 , Zm00025a000978 , Zm00025a044195
Brachypodium KQK09953 , KQK09947
Barley HORVU3Hr1G075040.1 , HORVU1Hr1G077560.1
Wheat TraesCS3D02G305600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G023400 expressed protein -
2 Sobic.009G191300 photosystem II reaction center W protein, chloroplast precursor, putative, expressed K02721: photosystem II PsbW protein
3 Sobic.006G136500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.003G264700 expressed protein -
5 Sobic.010G006350 - -
6 Sobic.001G364100 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
7 Sobic.001G417200 ATP synthase B chain, chloroplast precursor, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
8 Sobic.002G094800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G162200 NDH-M H PLASTOQUINONE DEHY, putative, expressed -
10 Sobic.003G230400 50S ribosomal protein L31, putative, expressed K02909: RP-L31, large subunit ribosomal protein L31
11 Sobic.002G264800 unknown(PubMedID : 29017446)@expressed protein -
12 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.006G127300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G147400 Ferredoxin(PubMedID : 26186930)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
15 Sobic.007G204400 expressed protein -
16 Sobic.003G146700 heavy metal-associated domain containing protein, expressed -
17 Sobic.007G212400 thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed -
18 Sobic.001G010100 ankyrin repeat domain containing protein, expressed -
19 Sobic.002G119500 Photosystem I reaction center subunit IV(PubMedID : 26186930)@photosystem I reaction center subunit IV A, chloroplast precursor, putative, expressed K02693: photosystem I subunit IV
20 Sobic.002G088200 expressed protein -


Gene co-expression network
sample Sobic003G309700 Sobic003G309700 Sobic004G023400 Sobic004G023400 Sobic003G309700--Sobic004G023400 Sobic009G191300 Sobic009G191300 Sobic003G309700--Sobic009G191300 Sobic006G136500 Sobic006G136500 Sobic003G309700--Sobic006G136500 Sobic003G264700 Sobic003G264700 Sobic003G309700--Sobic003G264700 Sobic010G006350 Sobic010G006350 Sobic003G309700--Sobic010G006350 Sobic001G364100 Sobic001G364100 Sobic003G309700--Sobic001G364100 Sobic001G417200 Sobic001G417200 Sobic003G309700--Sobic001G417200 Sobic002G094800 Sobic002G094800 Sobic003G309700--Sobic002G094800 Sobic006G162200 Sobic006G162200 Sobic003G309700--Sobic006G162200 Sobic004G204500 Sobic004G204500 Sobic004G023400--Sobic004G204500 Sobic004G023400--Sobic003G264700 Sobic004G023400--Sobic003G309700 Sobic003G132300 Sobic003G132300 Sobic004G023400--Sobic003G132300 Sobic007G204400 Sobic007G204400 Sobic004G023400--Sobic007G204400 Sobic009G237800 Sobic009G237800 Sobic004G023400--Sobic009G237800 Sobic006G127300 Sobic006G127300 Sobic004G023400--Sobic006G127300 Sobic009G179800 Sobic009G179800 Sobic004G023400--Sobic009G179800 Sobic010G208000 Sobic010G208000 Sobic004G023400--Sobic010G208000 Sobic008G038300 Sobic008G038300 Sobic009G191300--Sobic008G038300 Sobic003G209800 Sobic003G209800 Sobic009G191300--Sobic003G209800 Sobic002G040100 Sobic002G040100 Sobic009G191300--Sobic002G040100 Sobic003G052500 Sobic003G052500 Sobic009G191300--Sobic003G052500 Sobic004G035500 Sobic004G035500 Sobic009G191300--Sobic004G035500 Sobic003G359100 Sobic003G359100 Sobic009G191300--Sobic003G359100 Sobic003G199800 Sobic003G199800 Sobic009G191300--Sobic003G199800 Sobic010G109500 Sobic010G109500 Sobic009G191300--Sobic010G109500 Sobic001G338700 Sobic001G338700 Sobic009G191300--Sobic001G338700 Sobic006G136500--Sobic001G364100 Sobic006G234100 Sobic006G234100 Sobic006G136500--Sobic006G234100 Sobic006G136500--Sobic010G109500 Sobic006G136500--Sobic002G040100 Sobic009G132900 Sobic009G132900 Sobic006G136500--Sobic009G132900 Sobic006G136500--Sobic009G191300 Sobic003G057900 Sobic003G057900 Sobic006G136500--Sobic003G057900 Sobic002G339200 Sobic002G339200 Sobic006G136500--Sobic002G339200 Sobic002G000500 Sobic002G000500 Sobic006G136500--Sobic002G000500 Sobic003G264700--Sobic004G023400 Sobic003G264700--Sobic004G204500 Sobic003G264700--Sobic007G204400 Sobic002G088200 Sobic002G088200 Sobic003G264700--Sobic002G088200 Sobic003G264700--Sobic003G309700 Sobic003G264700--Sobic009G237800 Sobic010G042400 Sobic010G042400 Sobic003G264700--Sobic010G042400 Sobic001G381900 Sobic001G381900 Sobic003G264700--Sobic001G381900 Sobic001G543500 Sobic001G543500 Sobic003G264700--Sobic001G543500 Sobic001G192100 Sobic001G192100 Sobic010G006350--Sobic001G192100 Sobic010G006350--Sobic003G057900 Sobic001G198800 Sobic001G198800 Sobic010G006350--Sobic001G198800 Sobic003G131000 Sobic003G131000 Sobic010G006350--Sobic003G131000 Sobic004G026300 Sobic004G026300 Sobic010G006350--Sobic004G026300 Sobic008G080400 Sobic008G080400 Sobic010G006350--Sobic008G080400 Sobic010G006350--Sobic006G136500 Sobic008G019100 Sobic008G019100 Sobic010G006350--Sobic008G019100 Sobic002G152700 Sobic002G152700 Sobic010G006350--Sobic002G152700 Sobic001G364100--Sobic006G234100 Sobic001G364100--Sobic002G339200 Sobic010G241000 Sobic010G241000 Sobic001G364100--Sobic010G241000 Sobic001G364100--Sobic010G109500 Sobic002G264800 Sobic002G264800 Sobic001G364100--Sobic002G264800 Sobic001G364100--Sobic006G136500 Sobic001G078000 Sobic001G078000 Sobic001G364100--Sobic001G078000 Sobic009G234600 Sobic009G234600 Sobic001G364100--Sobic009G234600 Sobic002G329600 Sobic002G329600 Sobic001G364100--Sobic002G329600 Sobic009G143100 Sobic009G143100 Sobic001G417200--Sobic009G143100 Sobic007G071500 Sobic007G071500 Sobic001G417200--Sobic007G071500 Sobic002G316700 Sobic002G316700 Sobic001G417200--Sobic002G316700 Sobic007G223500 Sobic007G223500 Sobic001G417200--Sobic007G223500 Sobic006G093900 Sobic006G093900 Sobic001G417200--Sobic006G093900 Sobic001G035800 Sobic001G035800 Sobic001G417200--Sobic001G035800 Sobic003G387800 Sobic003G387800 Sobic001G417200--Sobic003G387800 Sobic001G029100 Sobic001G029100 Sobic001G417200--Sobic001G029100 Sobic007G004800 Sobic007G004800 Sobic001G417200--Sobic007G004800 Sobic002G233300 Sobic002G233300 Sobic002G094800--Sobic002G233300 Sobic002G094800--Sobic003G309700 Sobic003G234400 Sobic003G234400 Sobic002G094800--Sobic003G234400 Sobic010G095000 Sobic010G095000 Sobic002G094800--Sobic010G095000 Sobic006G017200 Sobic006G017200 Sobic002G094800--Sobic006G017200 Sobic003G231800 Sobic003G231800 Sobic002G094800--Sobic003G231800 Sobic002G214300 Sobic002G214300 Sobic002G094800--Sobic002G214300 Sobic002G094800--Sobic004G026300 Sobic002G094800--Sobic002G264800 Sobic006G162200--Sobic009G191300 Sobic005G039600 Sobic005G039600 Sobic006G162200--Sobic005G039600 Sobic003G230400 Sobic003G230400 Sobic006G162200--Sobic003G230400 Sobic006G162200--Sobic004G035500 Sobic006G162200--Sobic003G359100 Sobic001G520800 Sobic001G520800 Sobic006G162200--Sobic001G520800 Sobic006G162200--Sobic010G042400 Sobic006G162200--Sobic001G417200 Sobic008G053200 Sobic008G053200 Sobic006G162200--Sobic008G053200
Octagon: transcription factors


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