Gene annotation
Transcriptome id Sobic.003G146700.1
Synonym Sb03g012690
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt C5XIR8
Pfam PF00403
Panther DB PTHR22814 PTHR22814:SF89
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G56891 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os01g20830.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a024322
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G310400 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
2 Sobic.001G198800 -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
3 Sobic.003G131000 expressed protein -
4 Sobic.010G006350 - -
5 Sobic.004G182700 OsFBK8 - F-box domain and kelch repeat containing protein, expressed -
6 Sobic.008G080400 "cyanogenic beta-glucosidase dhurrinase, up-regulated under drought stress "(PubMedID : 24655390)@Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
7 Sobic.001G520800 expressed protein -
8 Sobic.009G191300 photosystem II reaction center W protein, chloroplast precursor, putative, expressed K02721: photosystem II PsbW protein
9 Sobic.002G152700 rhodanese-like, putative, expressed -
10 Sobic.005G202500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tropinone reductase 2, putative, expressed K08081: tropinone reductase I
11 Sobic.007G212400 thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed -
12 Sobic.008G036300 Ser/Thr protein phosphatase family protein, putative, expressed -
13 Sobic.005G167500 resistance protein, putative, expressed -
14 Sobic.005G039600 -(PubMedID : 26465154)@expressed protein -
15 Sobic.002G033800 expressed protein -
16 Sobic.006G136500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.003G058001 - -
18 Sobic.001G417200 ATP synthase B chain, chloroplast precursor, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
19 Sobic.008G030200 LTPL9 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.009G132900 PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase


Gene co-expression network
sample Sobic003G146700 Sobic003G146700 Sobic003G310400 Sobic003G310400 Sobic003G146700--Sobic003G310400 Sobic001G198800 Sobic001G198800 Sobic003G146700--Sobic001G198800 Sobic003G131000 Sobic003G131000 Sobic003G146700--Sobic003G131000 Sobic010G006350 Sobic010G006350 Sobic003G146700--Sobic010G006350 Sobic004G182700 Sobic004G182700 Sobic003G146700--Sobic004G182700 Sobic008G080400 Sobic008G080400 Sobic003G146700--Sobic008G080400 Sobic001G520800 Sobic001G520800 Sobic003G146700--Sobic001G520800 Sobic009G191300 Sobic009G191300 Sobic003G146700--Sobic009G191300 Sobic002G152700 Sobic002G152700 Sobic003G146700--Sobic002G152700 Sobic003G310400--Sobic001G198800 Sobic003G310400--Sobic002G152700 Sobic008G021300 Sobic008G021300 Sobic003G310400--Sobic008G021300 Sobic002G033800 Sobic002G033800 Sobic003G310400--Sobic002G033800 Sobic003G199800 Sobic003G199800 Sobic003G310400--Sobic003G199800 Sobic004G023200 Sobic004G023200 Sobic003G310400--Sobic004G023200 Sobic010G276400 Sobic010G276400 Sobic003G310400--Sobic010G276400 Sobic003G310400--Sobic001G520800 Sobic001G448400 Sobic001G448400 Sobic003G310400--Sobic001G448400 Sobic001G198800--Sobic004G182700 Sobic001G198800--Sobic003G310400 Sobic008G036300 Sobic008G036300 Sobic001G198800--Sobic008G036300 Sobic001G338700 Sobic001G338700 Sobic001G198800--Sobic001G338700 Sobic001G198800--Sobic002G033800 Sobic001G198800--Sobic003G131000 Sobic006G234100 Sobic006G234100 Sobic001G198800--Sobic006G234100 Sobic001G198800--Sobic001G448400 Sobic001G198800--Sobic008G080400 Sobic004G026300 Sobic004G026300 Sobic003G131000--Sobic004G026300 Sobic003G131000--Sobic001G198800 Sobic003G131000--Sobic010G276400 Sobic010G038500 Sobic010G038500 Sobic003G131000--Sobic010G038500 Sobic002G040100 Sobic002G040100 Sobic003G131000--Sobic002G040100 Sobic010G109500 Sobic010G109500 Sobic003G131000--Sobic010G109500 Sobic003G057900 Sobic003G057900 Sobic003G131000--Sobic003G057900 Sobic003G131000--Sobic003G199800 Sobic001G068400 Sobic001G068400 Sobic003G131000--Sobic001G068400 Sobic001G192100 Sobic001G192100 Sobic010G006350--Sobic001G192100 Sobic010G006350--Sobic003G057900 Sobic010G006350--Sobic001G198800 Sobic010G006350--Sobic003G131000 Sobic010G006350--Sobic004G026300 Sobic010G006350--Sobic008G080400 Sobic006G136500 Sobic006G136500 Sobic010G006350--Sobic006G136500 Sobic008G019100 Sobic008G019100 Sobic010G006350--Sobic008G019100 Sobic010G006350--Sobic002G152700 Sobic004G182700--Sobic008G036300 Sobic004G182700--Sobic001G198800 Sobic005G167500 Sobic005G167500 Sobic004G182700--Sobic005G167500 Sobic005G192600 Sobic005G192600 Sobic004G182700--Sobic005G192600 Sobic004G182700--Sobic008G080400 Sobic003G058001 Sobic003G058001 Sobic004G182700--Sobic003G058001 Sobic008G080600 Sobic008G080600 Sobic004G182700--Sobic008G080600 Sobic004G182700--Sobic003G310400 Sobic004G182700--Sobic003G131000 Sobic008G080400--Sobic004G182700 Sobic008G080400--Sobic008G036300 Sobic008G067200 Sobic008G067200 Sobic008G080400--Sobic008G067200 Sobic008G080400--Sobic001G198800 Sobic008G080400--Sobic003G057900 Sobic008G080400--Sobic008G080600 Sobic008G080400--Sobic005G167500 Sobic008G080400--Sobic003G131000 Sobic009G132900 Sobic009G132900 Sobic008G080400--Sobic009G132900 Sobic007G034300 Sobic007G034300 Sobic001G520800--Sobic007G034300 Sobic005G039600 Sobic005G039600 Sobic001G520800--Sobic005G039600 Sobic001G520800--Sobic003G199800 Sobic008G104601 Sobic008G104601 Sobic001G520800--Sobic008G104601 Sobic003G231800 Sobic003G231800 Sobic001G520800--Sobic003G231800 Sobic002G233300 Sobic002G233300 Sobic001G520800--Sobic002G233300 Sobic009G244300 Sobic009G244300 Sobic001G520800--Sobic009G244300 Sobic007G189700 Sobic007G189700 Sobic001G520800--Sobic007G189700 Sobic003G431900 Sobic003G431900 Sobic001G520800--Sobic003G431900 Sobic008G038300 Sobic008G038300 Sobic009G191300--Sobic008G038300 Sobic003G209800 Sobic003G209800 Sobic009G191300--Sobic003G209800 Sobic009G191300--Sobic002G040100 Sobic003G052500 Sobic003G052500 Sobic009G191300--Sobic003G052500 Sobic004G035500 Sobic004G035500 Sobic009G191300--Sobic004G035500 Sobic003G359100 Sobic003G359100 Sobic009G191300--Sobic003G359100 Sobic009G191300--Sobic003G199800 Sobic009G191300--Sobic010G109500 Sobic009G191300--Sobic001G338700 Sobic002G152700--Sobic008G021300 Sobic001G527000 Sobic001G527000 Sobic002G152700--Sobic001G527000 Sobic002G152700--Sobic002G033800 Sobic003G303700 Sobic003G303700 Sobic002G152700--Sobic003G303700 Sobic010G005500 Sobic010G005500 Sobic002G152700--Sobic010G005500 Sobic006G272900 Sobic006G272900 Sobic002G152700--Sobic006G272900 Sobic004G343300 Sobic004G343300 Sobic002G152700--Sobic004G343300 Sobic009G030900 Sobic009G030900 Sobic002G152700--Sobic009G030900 Sobic003G132100 Sobic003G132100 Sobic002G152700--Sobic003G132100
Octagon: transcription factors


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