Gene annotation
Transcriptome id Sobic.002G199100.1
Synonym Sb02g024520
Functional annotation peptidyl-prolyl cis-trans isomerase, putative, expressed
UniProt C5XC88
Pfam PF13616
Panther DB PTHR10657
NCBI CDD KOG3258; Parvulin-like peptidyl-prolyl cis-trans isomerase
KEGG Orthology K09579; peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26550 : FKBP-like peptidyl-prolyl cis-trans isomerase family protein
RAP-DB (Rice) LOC_Os09g24540.1 : peptidyl-prolyl cis-trans isomerase, putative, expressed
MaizeGDB (Corn) Zm00025a046950
Brachypodium KQJ90200
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G199100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G106400 endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
2 Sobic.007G022200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.010G171400 expressed protein -
4 Sobic.002G046700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@versicolorin reductase, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
5 Sobic.001G172800 RNA recognition motif containing protein, putative, expressed K09564: peptidyl-prolyl isomerase E (cyclophilin E)
6 Sobic.002G273100 expressed protein K19033: PSRP4, 30S ribosomal protein S31
7 Sobic.007G046400 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.004G307700 cyclin-dependent kinase inhibitor, putative, expressed -
9 Sobic.006G241900 plant-specific domain TIGR01627 family protein, expressed -
10 Sobic.004G033900 expressed protein -
11 Sobic.002G349300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
12 Sobic.003G032800 - -
13 Sobic.002G293900 mitochondrial glycoprotein, putative, expressed -
14 Sobic.001G477900 expressed protein -
15 Sobic.005G052000 serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
16 Sobic.004G134500 expressed protein -
17 Sobic.006G176100 expressed protein -
18 Sobic.001G020500 lectin protein kinase family protein, putative, expressed -
19 Sobic.007G096200 WD-40 repeat protein family, putative, expressed -
20 Sobic.006G269400 expressed protein -


Gene co-expression network
sample Sobic002G199100 Sobic002G199100 Sobic007G106400 Sobic007G106400 Sobic002G199100--Sobic007G106400 Sobic007G022200 Sobic007G022200 Sobic002G199100--Sobic007G022200 Sobic010G171400 Sobic010G171400 Sobic002G199100--Sobic010G171400 Sobic002G046700 Sobic002G046700 Sobic002G199100--Sobic002G046700 Sobic001G172800 Sobic001G172800 Sobic002G199100--Sobic001G172800 Sobic002G273100 Sobic002G273100 Sobic002G199100--Sobic002G273100 Sobic007G046400 Sobic007G046400 Sobic002G199100--Sobic007G046400 Sobic004G307700 Sobic004G307700 Sobic002G199100--Sobic004G307700 Sobic006G241900 Sobic006G241900 Sobic002G199100--Sobic006G241900 Sobic007G013500 Sobic007G013500 Sobic007G106400--Sobic007G013500 Sobic009G255300 Sobic009G255300 Sobic007G106400--Sobic009G255300 Sobic001G543500 Sobic001G543500 Sobic007G106400--Sobic001G543500 Sobic001G429100 Sobic001G429100 Sobic007G106400--Sobic001G429100 Sobic003G359800 Sobic003G359800 Sobic007G106400--Sobic003G359800 Sobic005G005500 Sobic005G005500 Sobic007G106400--Sobic005G005500 Sobic008G139900 Sobic008G139900 Sobic007G106400--Sobic008G139900 Sobic004G033900 Sobic004G033900 Sobic007G106400--Sobic004G033900 Sobic002G293900 Sobic002G293900 Sobic007G106400--Sobic002G293900 Sobic009G153200 Sobic009G153200 Sobic007G022200--Sobic009G153200 Sobic007G022200--Sobic002G199100 Sobic007G022200--Sobic002G046700 Sobic005G052000 Sobic005G052000 Sobic007G022200--Sobic005G052000 Sobic002G001800 Sobic002G001800 Sobic007G022200--Sobic002G001800 Sobic004G063200 Sobic004G063200 Sobic007G022200--Sobic004G063200 Sobic001G310800 Sobic001G310800 Sobic007G022200--Sobic001G310800 Sobic007G022200--Sobic010G171400 Sobic007G022200--Sobic004G033900 Sobic002G334500 Sobic002G334500 Sobic010G171400--Sobic002G334500 Sobic010G171400--Sobic002G046700 Sobic009G075100 Sobic009G075100 Sobic010G171400--Sobic009G075100 Sobic009G069901 Sobic009G069901 Sobic010G171400--Sobic009G069901 Sobic002G298400 Sobic002G298400 Sobic010G171400--Sobic002G298400 Sobic004G143801 Sobic004G143801 Sobic010G171400--Sobic004G143801 Sobic007G168000 Sobic007G168000 Sobic010G171400--Sobic007G168000 Sobic002G087500 Sobic002G087500 Sobic010G171400--Sobic002G087500 Sobic009G070800 Sobic009G070800 Sobic010G171400--Sobic009G070800 Sobic006G176100 Sobic006G176100 Sobic002G046700--Sobic006G176100 Sobic002G046700--Sobic010G171400 Sobic002G046700--Sobic002G334500 Sobic002G046700--Sobic004G307700 Sobic003G260800 Sobic003G260800 Sobic002G046700--Sobic003G260800 Sobic002G046700--Sobic007G022200 Sobic002G046700--Sobic002G199100 Sobic002G046700--Sobic009G153200 Sobic003G008300 Sobic003G008300 Sobic002G046700--Sobic003G008300 Sobic002G005700 Sobic002G005700 Sobic001G172800--Sobic002G005700 Sobic010G094500 Sobic010G094500 Sobic001G172800--Sobic010G094500 Sobic007G184400 Sobic007G184400 Sobic001G172800--Sobic007G184400 Sobic001G172800--Sobic002G199100 Sobic004G244800 Sobic004G244800 Sobic001G172800--Sobic004G244800 Sobic007G216600 Sobic007G216600 Sobic001G172800--Sobic007G216600 Sobic009G225900 Sobic009G225900 Sobic001G172800--Sobic009G225900 Sobic001G172800--Sobic002G273100 Sobic006G212000 Sobic006G212000 Sobic001G172800--Sobic006G212000 Sobic001G526900 Sobic001G526900 Sobic002G273100--Sobic001G526900 Sobic004G352900 Sobic004G352900 Sobic002G273100--Sobic004G352900 Sobic007G200100 Sobic007G200100 Sobic002G273100--Sobic007G200100 Sobic002G427900 Sobic002G427900 Sobic002G273100--Sobic002G427900 Sobic004G014000 Sobic004G014000 Sobic002G273100--Sobic004G014000 Sobic006G246100 Sobic006G246100 Sobic002G273100--Sobic006G246100 Sobic004G035200 Sobic004G035200 Sobic002G273100--Sobic004G035200 Sobic001G061101 Sobic001G061101 Sobic002G273100--Sobic001G061101 Sobic001G530350 Sobic001G530350 Sobic002G273100--Sobic001G530350 Sobic007G046400--Sobic010G171400 Sobic007G046400--Sobic006G176100 Sobic007G046400--Sobic002G199100 Sobic008G112500 Sobic008G112500 Sobic007G046400--Sobic008G112500 Sobic007G222800 Sobic007G222800 Sobic007G046400--Sobic007G222800 Sobic004G270500 Sobic004G270500 Sobic007G046400--Sobic004G270500 Sobic007G046400--Sobic002G046700 Sobic007G162000 Sobic007G162000 Sobic007G046400--Sobic007G162000 Sobic001G253900 Sobic001G253900 Sobic007G046400--Sobic001G253900 Sobic001G020500 Sobic001G020500 Sobic004G307700--Sobic001G020500 Sobic004G307700--Sobic002G046700 Sobic006G122900 Sobic006G122900 Sobic004G307700--Sobic006G122900 Sobic010G136900 Sobic010G136900 Sobic004G307700--Sobic010G136900 Sobic004G307700--Sobic002G293900 Sobic007G124000 Sobic007G124000 Sobic004G307700--Sobic007G124000 Sobic008G147101 Sobic008G147101 Sobic004G307700--Sobic008G147101 Sobic010G108500 Sobic010G108500 Sobic004G307700--Sobic010G108500 Sobic004G307700--Sobic004G033900 Sobic006G241900--Sobic007G200100 Sobic006G241900--Sobic002G273100 Sobic002G421600 Sobic002G421600 Sobic006G241900--Sobic002G421600 Sobic006G241900--Sobic002G199100 Sobic006G241900--Sobic001G172800 Sobic003G013600 Sobic003G013600 Sobic006G241900--Sobic003G013600 Sobic006G241900--Sobic002G427900 Sobic004G280401 Sobic004G280401 Sobic006G241900--Sobic004G280401 Sobic004G309500 Sobic004G309500 Sobic006G241900--Sobic004G309500
Octagon: transcription factors


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