Gene annotation
Transcriptome id Sobic.010G171400.2
Synonym Sb10g022400
Functional annotation expressed protein
UniProt A0A1W0VTK8
Pfam PF14364 PF05553
Panther DB PTHR33098 PTHR33098:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56980 : -
RAP-DB (Rice) LOC_Os06g37020.1 : expressed protein
MaizeGDB (Corn) Zm00025a050990
Brachypodium KQK17935 , KQK05137
Barley HORVU7Hr1G087420.2 , HORVU7Hr1G087420.3 , HORVU7Hr1G087420.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G334500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
2 Sobic.002G046700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@versicolorin reductase, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
3 Sobic.009G075100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@lachrymatory factor synthase, putative, expressed -
4 Sobic.009G069901 - -
5 Sobic.002G298400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
6 Sobic.004G143801 - -
7 Sobic.007G168000 chlorophyllase-2, chloroplast precursor, putative, expressed K08099: chlorophyllase
8 Sobic.002G087500 - -
9 Sobic.009G070800 HAD superfamily phosphatase, putative, expressed -
10 Sobic.002G040400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.006G007300 - -
12 Sobic.002G391700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase, putative, expressed K00430: peroxidase
13 Sobic.007G046400 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.008G077800 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.008G028600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY112, expressed -
16 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.008G028566 - -
18 Sobic.002G093600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Jacalin-like lectin domain containing protein, putative, expressed -
19 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
20 Sobic.006G005500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@von Willebrand factor type A domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G171400 Sobic010G171400 Sobic002G334500 Sobic002G334500 Sobic010G171400--Sobic002G334500 Sobic002G046700 Sobic002G046700 Sobic010G171400--Sobic002G046700 Sobic009G075100 Sobic009G075100 Sobic010G171400--Sobic009G075100 Sobic009G069901 Sobic009G069901 Sobic010G171400--Sobic009G069901 Sobic002G298400 Sobic002G298400 Sobic010G171400--Sobic002G298400 Sobic004G143801 Sobic004G143801 Sobic010G171400--Sobic004G143801 Sobic007G168000 Sobic007G168000 Sobic010G171400--Sobic007G168000 Sobic002G087500 Sobic002G087500 Sobic010G171400--Sobic002G087500 Sobic009G070800 Sobic009G070800 Sobic010G171400--Sobic009G070800 Sobic009G115400 Sobic009G115400 Sobic002G334500--Sobic009G115400 Sobic009G115300 Sobic009G115300 Sobic002G334500--Sobic009G115300 Sobic006G007650 Sobic006G007650 Sobic002G334500--Sobic006G007650 Sobic002G108400 Sobic002G108400 Sobic002G334500--Sobic002G108400 Sobic002G202700 Sobic002G202700 Sobic002G334500--Sobic002G202700 Sobic006G005500 Sobic006G005500 Sobic002G334500--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic002G334500--Sobic001G125700 Sobic001G201800 Sobic001G201800 Sobic002G334500--Sobic001G201800 Sobic007G076000 Sobic007G076000 Sobic002G334500--Sobic007G076000 Sobic006G176100 Sobic006G176100 Sobic002G046700--Sobic006G176100 Sobic002G046700--Sobic010G171400 Sobic002G046700--Sobic002G334500 Sobic004G307700 Sobic004G307700 Sobic002G046700--Sobic004G307700 Sobic003G260800 Sobic003G260800 Sobic002G046700--Sobic003G260800 Sobic007G022200 Sobic007G022200 Sobic002G046700--Sobic007G022200 Sobic002G199100 Sobic002G199100 Sobic002G046700--Sobic002G199100 Sobic009G153200 Sobic009G153200 Sobic002G046700--Sobic009G153200 Sobic003G008300 Sobic003G008300 Sobic002G046700--Sobic003G008300 Sobic004G078600 Sobic004G078600 Sobic009G075100--Sobic004G078600 Sobic009G233900 Sobic009G233900 Sobic009G075100--Sobic009G233900 Sobic009G075100--Sobic001G201800 Sobic009G075100--Sobic009G115400 Sobic004G007500 Sobic004G007500 Sobic009G075100--Sobic004G007500 Sobic003G214000 Sobic003G214000 Sobic009G075100--Sobic003G214000 Sobic002G423600 Sobic002G423600 Sobic009G075100--Sobic002G423600 Sobic001G448800 Sobic001G448800 Sobic009G075100--Sobic001G448800 Sobic009G000900 Sobic009G000900 Sobic009G075100--Sobic009G000900 Sobic009G069901--Sobic002G298400 Sobic002G040400 Sobic002G040400 Sobic009G069901--Sobic002G040400 Sobic009G069901--Sobic002G087500 Sobic002G391700 Sobic002G391700 Sobic009G069901--Sobic002G391700 Sobic002G093600 Sobic002G093600 Sobic009G069901--Sobic002G093600 Sobic008G028566 Sobic008G028566 Sobic009G069901--Sobic008G028566 Sobic008G028600 Sobic008G028600 Sobic009G069901--Sobic008G028600 Sobic009G069901--Sobic004G143801 Sobic008G077800 Sobic008G077800 Sobic009G069901--Sobic008G077800 Sobic002G298400--Sobic002G040400 Sobic002G298400--Sobic002G087500 Sobic002G298400--Sobic002G391700 Sobic002G298400--Sobic008G028600 Sobic002G298400--Sobic002G093600 Sobic002G298400--Sobic008G077800 Sobic002G298400--Sobic004G143801 Sobic002G298400--Sobic008G028566 Sobic005G219000 Sobic005G219000 Sobic002G298400--Sobic005G219000 Sobic004G143801--Sobic002G298400 Sobic004G143801--Sobic002G087500 Sobic004G143801--Sobic002G040400 Sobic004G143801--Sobic002G391700 Sobic004G143801--Sobic002G093600 Sobic004G143801--Sobic008G077800 Sobic004G143801--Sobic008G028600 Sobic006G007300 Sobic006G007300 Sobic004G143801--Sobic006G007300 Sobic004G143801--Sobic008G028566 Sobic007G168000--Sobic004G143801 Sobic007G168000--Sobic006G007300 Sobic007G168000--Sobic008G077800 Sobic006G007600 Sobic006G007600 Sobic007G168000--Sobic006G007600 Sobic007G168000--Sobic002G093600 Sobic007G168000--Sobic002G298400 Sobic007G168000--Sobic002G391700 Sobic007G168000--Sobic002G087500 Sobic007G168000--Sobic002G040400 Sobic002G087500--Sobic002G040400 Sobic002G087500--Sobic002G298400 Sobic002G087500--Sobic008G028600 Sobic002G087500--Sobic002G391700 Sobic002G087500--Sobic002G093600 Sobic002G087500--Sobic008G077800 Sobic002G087500--Sobic005G219000 Sobic002G087500--Sobic006G005500 Sobic002G087500--Sobic001G125700 Sobic009G009500 Sobic009G009500 Sobic009G070800--Sobic009G009500 Sobic009G070800--Sobic009G000900 Sobic007G029000 Sobic007G029000 Sobic009G070800--Sobic007G029000 Sobic009G070800--Sobic004G007500 Sobic001G315200 Sobic001G315200 Sobic009G070800--Sobic001G315200 Sobic009G197300 Sobic009G197300 Sobic009G070800--Sobic009G197300 Sobic009G070800--Sobic007G168000 Sobic009G070800--Sobic009G075100 Sobic008G049200 Sobic008G049200 Sobic009G070800--Sobic008G049200
Octagon: transcription factors


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