Gene annotation
Transcriptome id Sobic.007G046400.1
Synonym BRH1, Sb07g003830
Functional annotation zinc finger, C3HC4 type domain containing protein, expressed
UniProt C5YH08
Pfam PF13639
Panther DB PTHR14155
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT3G61460 : brassinosteroid-responsive RING-H2
RAP-DB (Rice) LOC_Os08g06090.1 : zinc finger, C3HC4 type domain containing protein, expressed
MaizeGDB (Corn) Zm00025a030084
Brachypodium KQJ95324
Barley HORVU7Hr1G071020.5 , HORVU7Hr1G071020.4 , HORVU7Hr1G071020.3 , HORVU7Hr1G071020.2 , HORVU7Hr1G071020.1
Wheat -
Populus -


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cDNA sequences
Sobic.007G046400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G171400 expressed protein -
2 Sobic.006G176100 expressed protein -
3 Sobic.002G199100 peptidyl-prolyl cis-trans isomerase, putative, expressed K09579: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
4 Sobic.008G112500 zinc finger family protein, putative, expressed -
5 Sobic.007G222800 RNA recognition motif family protein, expressed K14398: cleavage and polyadenylation specificity factor subunit 6/7
6 Sobic.004G270500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
7 Sobic.002G046700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@versicolorin reductase, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
8 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
9 Sobic.001G253900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
10 Sobic.001G477900 expressed protein -
11 Sobic.002G202500 spotted leaf 11, putative, expressed -
12 Sobic.009G070800 HAD superfamily phosphatase, putative, expressed -
13 Sobic.006G056100 expressed protein -
14 Sobic.006G080000 protein of unknown function domain containing protein, expressed K14525: ribonucleases P/MRP protein subunit RPP25
15 Sobic.010G136500 expressed protein -
16 Sobic.001G199900 expressed protein -
17 Sobic.004G033900 expressed protein -
18 Sobic.008G131200 DUF538 domain containing protein, putative, expressed -
19 Sobic.001G263500 glycosyl hydrolases family 17, putative, expressed -
20 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic007G046400 Sobic007G046400 Sobic010G171400 Sobic010G171400 Sobic007G046400--Sobic010G171400 Sobic006G176100 Sobic006G176100 Sobic007G046400--Sobic006G176100 Sobic002G199100 Sobic002G199100 Sobic007G046400--Sobic002G199100 Sobic008G112500 Sobic008G112500 Sobic007G046400--Sobic008G112500 Sobic007G222800 Sobic007G222800 Sobic007G046400--Sobic007G222800 Sobic004G270500 Sobic004G270500 Sobic007G046400--Sobic004G270500 Sobic002G046700 Sobic002G046700 Sobic007G046400--Sobic002G046700 Sobic007G162000 Sobic007G162000 Sobic007G046400--Sobic007G162000 Sobic001G253900 Sobic001G253900 Sobic007G046400--Sobic001G253900 Sobic002G334500 Sobic002G334500 Sobic010G171400--Sobic002G334500 Sobic010G171400--Sobic002G046700 Sobic009G075100 Sobic009G075100 Sobic010G171400--Sobic009G075100 Sobic009G069901 Sobic009G069901 Sobic010G171400--Sobic009G069901 Sobic002G298400 Sobic002G298400 Sobic010G171400--Sobic002G298400 Sobic004G143801 Sobic004G143801 Sobic010G171400--Sobic004G143801 Sobic007G168000 Sobic007G168000 Sobic010G171400--Sobic007G168000 Sobic002G087500 Sobic002G087500 Sobic010G171400--Sobic002G087500 Sobic009G070800 Sobic009G070800 Sobic010G171400--Sobic009G070800 Sobic005G184100 Sobic005G184100 Sobic006G176100--Sobic005G184100 Sobic006G176100--Sobic002G046700 Sobic002G283800 Sobic002G283800 Sobic006G176100--Sobic002G283800 Sobic001G516800 Sobic001G516800 Sobic006G176100--Sobic001G516800 Sobic010G136900 Sobic010G136900 Sobic006G176100--Sobic010G136900 Sobic001G161300 Sobic001G161300 Sobic006G176100--Sobic001G161300 Sobic006G176100--Sobic002G334500 Sobic004G033900 Sobic004G033900 Sobic006G176100--Sobic004G033900 Sobic006G176100--Sobic010G171400 Sobic007G106400 Sobic007G106400 Sobic002G199100--Sobic007G106400 Sobic007G022200 Sobic007G022200 Sobic002G199100--Sobic007G022200 Sobic002G199100--Sobic010G171400 Sobic002G199100--Sobic002G046700 Sobic001G172800 Sobic001G172800 Sobic002G199100--Sobic001G172800 Sobic002G273100 Sobic002G273100 Sobic002G199100--Sobic002G273100 Sobic002G199100--Sobic007G046400 Sobic004G307700 Sobic004G307700 Sobic002G199100--Sobic004G307700 Sobic006G241900 Sobic006G241900 Sobic002G199100--Sobic006G241900 Sobic002G002700 Sobic002G002700 Sobic008G112500--Sobic002G002700 Sobic008G112500--Sobic006G176100 Sobic009G214800 Sobic009G214800 Sobic008G112500--Sobic009G214800 Sobic008G112500--Sobic007G046400 Sobic003G032800 Sobic003G032800 Sobic008G112500--Sobic003G032800 Sobic010G115900 Sobic010G115900 Sobic008G112500--Sobic010G115900 Sobic008G112500--Sobic007G222800 Sobic001G280400 Sobic001G280400 Sobic008G112500--Sobic001G280400 Sobic010G185600 Sobic010G185600 Sobic008G112500--Sobic010G185600 Sobic006G080000 Sobic006G080000 Sobic007G222800--Sobic006G080000 Sobic005G033300 Sobic005G033300 Sobic007G222800--Sobic005G033300 Sobic007G096200 Sobic007G096200 Sobic007G222800--Sobic007G096200 Sobic002G140900 Sobic002G140900 Sobic007G222800--Sobic002G140900 Sobic004G134500 Sobic004G134500 Sobic007G222800--Sobic004G134500 Sobic001G199900 Sobic001G199900 Sobic007G222800--Sobic001G199900 Sobic005G164500 Sobic005G164500 Sobic007G222800--Sobic005G164500 Sobic010G171100 Sobic010G171100 Sobic007G222800--Sobic010G171100 Sobic009G105800 Sobic009G105800 Sobic007G222800--Sobic009G105800 Sobic010G208000 Sobic010G208000 Sobic004G270500--Sobic010G208000 Sobic004G353900 Sobic004G353900 Sobic004G270500--Sobic004G353900 Sobic004G034500 Sobic004G034500 Sobic004G270500--Sobic004G034500 Sobic004G066300 Sobic004G066300 Sobic004G270500--Sobic004G066300 Sobic006G079100 Sobic006G079100 Sobic004G270500--Sobic006G079100 Sobic009G010900 Sobic009G010900 Sobic004G270500--Sobic009G010900 Sobic010G268100 Sobic010G268100 Sobic004G270500--Sobic010G268100 Sobic008G131200 Sobic008G131200 Sobic004G270500--Sobic008G131200 Sobic001G030200 Sobic001G030200 Sobic004G270500--Sobic001G030200 Sobic002G046700--Sobic006G176100 Sobic002G046700--Sobic010G171400 Sobic002G046700--Sobic002G334500 Sobic002G046700--Sobic004G307700 Sobic003G260800 Sobic003G260800 Sobic002G046700--Sobic003G260800 Sobic002G046700--Sobic007G022200 Sobic002G046700--Sobic002G199100 Sobic009G153200 Sobic009G153200 Sobic002G046700--Sobic009G153200 Sobic003G008300 Sobic003G008300 Sobic002G046700--Sobic003G008300 Sobic002G202500 Sobic002G202500 Sobic007G162000--Sobic002G202500 Sobic009G195600 Sobic009G195600 Sobic007G162000--Sobic009G195600 Sobic007G019600 Sobic007G019600 Sobic007G162000--Sobic007G019600 Sobic003G047200 Sobic003G047200 Sobic007G162000--Sobic003G047200 Sobic001G331100 Sobic001G331100 Sobic007G162000--Sobic001G331100 Sobic002G035500 Sobic002G035500 Sobic007G162000--Sobic002G035500 Sobic007G162000--Sobic001G253900 Sobic006G155900 Sobic006G155900 Sobic007G162000--Sobic006G155900 Sobic003G432000 Sobic003G432000 Sobic007G162000--Sobic003G432000 Sobic001G451800 Sobic001G451800 Sobic001G253900--Sobic001G451800 Sobic001G253900--Sobic007G162000 Sobic007G113900 Sobic007G113900 Sobic001G253900--Sobic007G113900 Sobic008G156900 Sobic008G156900 Sobic001G253900--Sobic008G156900 Sobic003G300100 Sobic003G300100 Sobic001G253900--Sobic003G300100 Sobic004G288500 Sobic004G288500 Sobic001G253900--Sobic004G288500 Sobic009G134000 Sobic009G134000 Sobic001G253900--Sobic009G134000 Sobic001G253900--Sobic002G202500 Sobic008G083300 Sobic008G083300 Sobic001G253900--Sobic008G083300
Octagon: transcription factors


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