Gene annotation
Transcriptome id Sobic.004G033900.1
Synonym Sb04g002920
Functional annotation expressed protein
UniProt A0A194YNK8
Pfam -
Panther DB PTHR12176 PTHR12176:SF29
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G63100 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g28820.1 : expressed protein
MaizeGDB (Corn) Zm00025a018907
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G088200 expressed protein -
2 Sobic.004G034500 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
3 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
4 Sobic.005G052000 serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.001G516800 signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed K12271: SRP43, signal recognition particle 43 kDa protein
6 Sobic.010G108500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.001G310800 lectin-like receptor kinase, putative, expressed -
8 Sobic.010G082800 calvin cycle protein CP12, putative, expressed -
9 Sobic.006G118000 expressed protein -
10 Sobic.001G004500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
11 Sobic.007G106400 endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
12 Sobic.006G269400 expressed protein -
13 Sobic.004G072000 ribosome, putative, expressed -
14 Sobic.003G107100 peptide transporter PTR2, putative, expressed -
15 Sobic.003G264700 expressed protein -
16 Sobic.008G139900 expressed protein -
17 Sobic.004G187100 BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
18 Sobic.003G336200 expressed protein -
19 Sobic.004G307700 cyclin-dependent kinase inhibitor, putative, expressed -
20 Sobic.001G361900 ATPase, putative, expressed K08900: mitochondrial chaperone BCS1


Gene co-expression network
sample Sobic004G033900 Sobic004G033900 Sobic002G088200 Sobic002G088200 Sobic004G033900--Sobic002G088200 Sobic004G034500 Sobic004G034500 Sobic004G033900--Sobic004G034500 Sobic001G543500 Sobic001G543500 Sobic004G033900--Sobic001G543500 Sobic005G052000 Sobic005G052000 Sobic004G033900--Sobic005G052000 Sobic001G516800 Sobic001G516800 Sobic004G033900--Sobic001G516800 Sobic010G108500 Sobic010G108500 Sobic004G033900--Sobic010G108500 Sobic001G310800 Sobic001G310800 Sobic004G033900--Sobic001G310800 Sobic010G082800 Sobic010G082800 Sobic004G033900--Sobic010G082800 Sobic006G118000 Sobic006G118000 Sobic004G033900--Sobic006G118000 Sobic002G088200--Sobic001G543500 Sobic002G088200--Sobic001G516800 Sobic002G088200--Sobic004G033900 Sobic003G264700 Sobic003G264700 Sobic002G088200--Sobic003G264700 Sobic002G256000 Sobic002G256000 Sobic002G088200--Sobic002G256000 Sobic002G088200--Sobic006G118000 Sobic002G119500 Sobic002G119500 Sobic002G088200--Sobic002G119500 Sobic001G147400 Sobic001G147400 Sobic002G088200--Sobic001G147400 Sobic010G208000 Sobic010G208000 Sobic002G088200--Sobic010G208000 Sobic004G072000 Sobic004G072000 Sobic004G034500--Sobic004G072000 Sobic004G034500--Sobic010G208000 Sobic004G034500--Sobic001G516800 Sobic001G030200 Sobic001G030200 Sobic004G034500--Sobic001G030200 Sobic003G246600 Sobic003G246600 Sobic004G034500--Sobic003G246600 Sobic004G066300 Sobic004G066300 Sobic004G034500--Sobic004G066300 Sobic004G034500--Sobic004G033900 Sobic008G131200 Sobic008G131200 Sobic004G034500--Sobic008G131200 Sobic004G034500--Sobic001G543500 Sobic001G543500--Sobic002G088200 Sobic001G543500--Sobic004G072000 Sobic008G139900 Sobic008G139900 Sobic001G543500--Sobic008G139900 Sobic001G543500--Sobic001G516800 Sobic001G543500--Sobic010G208000 Sobic001G543500--Sobic004G034500 Sobic001G543500--Sobic004G033900 Sobic005G005500 Sobic005G005500 Sobic001G543500--Sobic005G005500 Sobic002G314200 Sobic002G314200 Sobic001G543500--Sobic002G314200 Sobic005G052000--Sobic004G033900 Sobic005G052000--Sobic001G310800 Sobic001G004500 Sobic001G004500 Sobic005G052000--Sobic001G004500 Sobic007G105800 Sobic007G105800 Sobic005G052000--Sobic007G105800 Sobic004G186600 Sobic004G186600 Sobic005G052000--Sobic004G186600 Sobic009G153200 Sobic009G153200 Sobic005G052000--Sobic009G153200 Sobic002G334500 Sobic002G334500 Sobic005G052000--Sobic002G334500 Sobic010G171400 Sobic010G171400 Sobic005G052000--Sobic010G171400 Sobic010G267000 Sobic010G267000 Sobic005G052000--Sobic010G267000 Sobic001G516800--Sobic010G208000 Sobic002G283800 Sobic002G283800 Sobic001G516800--Sobic002G283800 Sobic001G516800--Sobic001G030200 Sobic001G516800--Sobic001G147400 Sobic001G516800--Sobic004G034500 Sobic001G516800--Sobic002G088200 Sobic002G019900 Sobic002G019900 Sobic001G516800--Sobic002G019900 Sobic001G516800--Sobic001G543500 Sobic009G179800 Sobic009G179800 Sobic001G516800--Sobic009G179800 Sobic010G108500--Sobic006G118000 Sobic010G108500--Sobic004G033900 Sobic010G108500--Sobic001G310800 Sobic002G186600 Sobic002G186600 Sobic010G108500--Sobic002G186600 Sobic008G147101 Sobic008G147101 Sobic010G108500--Sobic008G147101 Sobic010G108500--Sobic002G088200 Sobic004G307700 Sobic004G307700 Sobic010G108500--Sobic004G307700 Sobic010G108500--Sobic001G516800 Sobic009G010700 Sobic009G010700 Sobic010G108500--Sobic009G010700 Sobic001G275200 Sobic001G275200 Sobic001G310800--Sobic001G275200 Sobic006G273000 Sobic006G273000 Sobic001G310800--Sobic006G273000 Sobic003G088800 Sobic003G088800 Sobic001G310800--Sobic003G088800 Sobic001G019300 Sobic001G019300 Sobic001G310800--Sobic001G019300 Sobic006G269400 Sobic006G269400 Sobic001G310800--Sobic006G269400 Sobic001G310800--Sobic005G052000 Sobic001G005500 Sobic001G005500 Sobic001G310800--Sobic001G005500 Sobic001G310800--Sobic009G010700 Sobic001G310800--Sobic004G033900 Sobic010G082800--Sobic002G256000 Sobic005G021600 Sobic005G021600 Sobic010G082800--Sobic005G021600 Sobic009G138900 Sobic009G138900 Sobic010G082800--Sobic009G138900 Sobic009G253000 Sobic009G253000 Sobic010G082800--Sobic009G253000 Sobic008G063100 Sobic008G063100 Sobic010G082800--Sobic008G063100 Sobic003G421400 Sobic003G421400 Sobic010G082800--Sobic003G421400 Sobic002G038300 Sobic002G038300 Sobic010G082800--Sobic002G038300 Sobic002G386400 Sobic002G386400 Sobic010G082800--Sobic002G386400 Sobic002G195700 Sobic002G195700 Sobic010G082800--Sobic002G195700 Sobic006G118000--Sobic008G139900 Sobic006G118000--Sobic002G186600 Sobic006G118000--Sobic004G072000 Sobic006G118000--Sobic010G108500 Sobic006G118000--Sobic008G131200 Sobic006G118000--Sobic010G208000 Sobic006G118000--Sobic001G516800 SobicK044200 SobicK044200 Sobic006G118000--SobicK044200 Sobic001G115800 Sobic001G115800 Sobic006G118000--Sobic001G115800
Octagon: transcription factors


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