Gene annotation
Transcriptome id Sobic.001G004500.1
Synonym Sb01g000500
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
uncharacterized protein PA4923, putative, expressed
UniProt C5WRW9
Pfam PF03641
Panther DB PTHR31223 PTHR31223:SF19
NCBI CDD -
KEGG Orthology K06966; pyrimidine/purine-5'-nucleotide nucleosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37210 : lysine decarboxylase family protein
RAP-DB (Rice) LOC_Os02g41770.1 : uncharacterized protein PA4923, putative, expressed
MaizeGDB (Corn) Zm00025a044409
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G015200 Phototropic-responsive NPH3 family protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
2 Sobic.008G036350 - -
3 Sobic.005G167500 resistance protein, putative, expressed -
4 Sobic.005G052000 serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
5 Sobic.008G036300 Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.002G119500 Photosystem I reaction center subunit IV(PubMedID : 26186930)@photosystem I reaction center subunit IV A, chloroplast precursor, putative, expressed K02693: photosystem I subunit IV
7 Sobic.004G033900 expressed protein -
8 Sobic.001G310800 lectin-like receptor kinase, putative, expressed -
9 Sobic.005G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
10 Sobic.002G088200 expressed protein -
11 Sobic.007G212400 thylakoid lumenal 19 kDa protein, chloroplast precursor, putative, expressed -
12 Sobic.004G210601 - -
13 Sobic.004G182700 OsFBK8 - F-box domain and kelch repeat containing protein, expressed -
14 Sobic.008G080600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
15 Sobic.003G106500 expressed protein -
16 Sobic.003G058001 - -
17 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
18 Sobic.009G202400 expressed protein -
19 Sobic.001G435500 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
20 Sobic.002G233300 Cupredoxin superfamily protein(PubMedID : 26465154)@plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G004500 Sobic001G004500 Sobic005G015200 Sobic005G015200 Sobic001G004500--Sobic005G015200 Sobic008G036350 Sobic008G036350 Sobic001G004500--Sobic008G036350 Sobic005G167500 Sobic005G167500 Sobic001G004500--Sobic005G167500 Sobic005G052000 Sobic005G052000 Sobic001G004500--Sobic005G052000 Sobic008G036300 Sobic008G036300 Sobic001G004500--Sobic008G036300 Sobic002G119500 Sobic002G119500 Sobic001G004500--Sobic002G119500 Sobic004G033900 Sobic004G033900 Sobic001G004500--Sobic004G033900 Sobic001G310800 Sobic001G310800 Sobic001G004500--Sobic001G310800 Sobic005G192600 Sobic005G192600 Sobic001G004500--Sobic005G192600 Sobic003G097800 Sobic003G097800 Sobic005G015200--Sobic003G097800 Sobic004G272600 Sobic004G272600 Sobic005G015200--Sobic004G272600 Sobic001G338700 Sobic001G338700 Sobic005G015200--Sobic001G338700 Sobic009G191300 Sobic009G191300 Sobic005G015200--Sobic009G191300 Sobic002G233300 Sobic002G233300 Sobic005G015200--Sobic002G233300 Sobic005G015200--Sobic005G167500 Sobic001G070500 Sobic001G070500 Sobic005G015200--Sobic001G070500 Sobic003G052500 Sobic003G052500 Sobic005G015200--Sobic003G052500 Sobic006G135100 Sobic006G135100 Sobic005G015200--Sobic006G135100 Sobic008G036350--Sobic008G036300 Sobic008G036350--Sobic005G167500 Sobic008G036350--Sobic005G192600 Sobic001G435500 Sobic001G435500 Sobic008G036350--Sobic001G435500 Sobic008G036350--Sobic001G338700 Sobic004G056900 Sobic004G056900 Sobic008G036350--Sobic004G056900 Sobic008G036350--Sobic001G070500 Sobic001G498300 Sobic001G498300 Sobic008G036350--Sobic001G498300 Sobic002G242000 Sobic002G242000 Sobic008G036350--Sobic002G242000 Sobic005G167500--Sobic008G036300 Sobic003G058001 Sobic003G058001 Sobic005G167500--Sobic003G058001 Sobic004G182700 Sobic004G182700 Sobic005G167500--Sobic004G182700 Sobic005G167500--Sobic005G192600 Sobic005G167500--Sobic008G036350 Sobic004G210601 Sobic004G210601 Sobic005G167500--Sobic004G210601 Sobic001G198800 Sobic001G198800 Sobic005G167500--Sobic001G198800 Sobic005G065500 Sobic005G065500 Sobic005G167500--Sobic005G065500 Sobic009G202400 Sobic009G202400 Sobic005G167500--Sobic009G202400 Sobic005G052000--Sobic004G033900 Sobic005G052000--Sobic001G310800 Sobic005G052000--Sobic001G004500 Sobic007G105800 Sobic007G105800 Sobic005G052000--Sobic007G105800 Sobic004G186600 Sobic004G186600 Sobic005G052000--Sobic004G186600 Sobic009G153200 Sobic009G153200 Sobic005G052000--Sobic009G153200 Sobic002G334500 Sobic002G334500 Sobic005G052000--Sobic002G334500 Sobic010G171400 Sobic010G171400 Sobic005G052000--Sobic010G171400 Sobic010G267000 Sobic010G267000 Sobic005G052000--Sobic010G267000 Sobic008G036300--Sobic005G167500 Sobic008G036300--Sobic004G182700 Sobic008G036300--Sobic005G192600 Sobic008G036300--Sobic008G036350 Sobic008G036300--Sobic001G198800 Sobic008G080400 Sobic008G080400 Sobic008G036300--Sobic008G080400 Sobic008G036300--Sobic003G058001 Sobic008G036300--Sobic001G338700 Sobic008G080600 Sobic008G080600 Sobic008G036300--Sobic008G080600 Sobic002G119500--Sobic002G242000 Sobic002G119500--Sobic001G070500 Sobic002G119500--Sobic004G056900 Sobic009G130700 Sobic009G130700 Sobic002G119500--Sobic009G130700 Sobic002G033900 Sobic002G033900 Sobic002G119500--Sobic002G033900 Sobic001G364100 Sobic001G364100 Sobic002G119500--Sobic001G364100 Sobic001G078000 Sobic001G078000 Sobic002G119500--Sobic001G078000 Sobic001G046900 Sobic001G046900 Sobic002G119500--Sobic001G046900 Sobic002G329600 Sobic002G329600 Sobic002G119500--Sobic002G329600 Sobic002G088200 Sobic002G088200 Sobic004G033900--Sobic002G088200 Sobic004G034500 Sobic004G034500 Sobic004G033900--Sobic004G034500 Sobic001G543500 Sobic001G543500 Sobic004G033900--Sobic001G543500 Sobic004G033900--Sobic005G052000 Sobic001G516800 Sobic001G516800 Sobic004G033900--Sobic001G516800 Sobic010G108500 Sobic010G108500 Sobic004G033900--Sobic010G108500 Sobic004G033900--Sobic001G310800 Sobic010G082800 Sobic010G082800 Sobic004G033900--Sobic010G082800 Sobic006G118000 Sobic006G118000 Sobic004G033900--Sobic006G118000 Sobic001G275200 Sobic001G275200 Sobic001G310800--Sobic001G275200 Sobic006G273000 Sobic006G273000 Sobic001G310800--Sobic006G273000 Sobic003G088800 Sobic003G088800 Sobic001G310800--Sobic003G088800 Sobic001G019300 Sobic001G019300 Sobic001G310800--Sobic001G019300 Sobic006G269400 Sobic006G269400 Sobic001G310800--Sobic006G269400 Sobic001G310800--Sobic005G052000 Sobic001G005500 Sobic001G005500 Sobic001G310800--Sobic001G005500 Sobic009G010700 Sobic009G010700 Sobic001G310800--Sobic009G010700 Sobic001G310800--Sobic004G033900 Sobic005G192600--Sobic005G167500 Sobic005G192600--Sobic004G182700 Sobic005G192600--Sobic008G036300 Sobic005G192600--Sobic008G036350 Sobic005G192600--Sobic009G202400 Sobic005G192600--Sobic001G498300 Sobic005G192600--Sobic001G198800 Sobic005G192600--Sobic003G058001 Sobic003G106500 Sobic003G106500 Sobic005G192600--Sobic003G106500
Octagon: transcription factors


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