Gene annotation
Transcriptome id Sobic.003G107100.3,Sobic.003G107100.1,Sobic.003G107100.2,Sobic.003G107100.4
Synonym Sb02g031360
Functional annotation peptide transporter PTR2, putative, expressed
UniProt C5XF28 , A0A097PNU6 , A0A1W0VWR9
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF112
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G13400 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os01g01360.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a025017 , Zm00025a032530 , Zm00025a035605 , Zm00025a021813 , Zm00025a003670 , Zm00025a023849 , Zm00025a026389
Brachypodium KQK02639 , KQK11069 , KQK02769 , PNT77238 , KQK02641 , KQK02640 , KQK02642
Barley HORVU3Hr1G088850.6 , HORVU4Hr1G064820.2 , HORVU4Hr1G064820.3 , HORVU4Hr1G064820.1 , HORVU4Hr1G088890.1 , HORVU4Hr1G088890.2 , HORVU3Hr1G010830.1 , HORVU3Hr1G010830.2 , HORVU4Hr1G086920.1 , HORVU3Hr1G088850.11 , HORVU3Hr1G088850.12 , HORVU3Hr1G088850.13 , HORVU3Hr1G014510.2 , HORVU3Hr1G014510.3 , HORVU3Hr1G014510.1 , HORVU3Hr1G010570.8 , HORVU3Hr1G010570.4 , HORVU3Hr1G010570.5 , HORVU3Hr1G010570.6 , HORVU3Hr1G010570.1 , HORVU3Hr1G010570.2 , HORVU3Hr1G010570.3 , HORVU3Hr1G088850.9 , HORVU3Hr1G088850.3 , HORVU3Hr1G010570.7
Wheat TraesCS3A02G081100 , TraesCS3A02G081100 , TraesCS3A02G081100 , TraesCS4B02G231800 , TraesCS2D02G442700 , TraesCS3D02G056700 , TraesCS3A02G057000 , TraesCS4D02G233100 , TraesCS2A02G443600 , TraesCS3D02G056300 , TraesCS2A02G416800 , TraesCS2D02G413900 , TraesCS5B02G245300 , TraesCS2B02G464700 , TraesCS4A02G076000 , TraesCS3D02G385700 , TraesCS3B02G070200
Populus -


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cDNA sequences
Sobic.003G107100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G336200 expressed protein -
2 Sobic.001G077100 pentatricopeptide, putative, expressed -
3 Sobic.004G033900 expressed protein -
4 Sobic.002G088200 expressed protein -
5 Sobic.002G256000 dehydrogenase, putative, expressed -
6 Sobic.010G082800 calvin cycle protein CP12, putative, expressed -
7 Sobic.010G244600 nifU, putative, expressed -
8 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
9 Sobic.002G119500 Photosystem I reaction center subunit IV(PubMedID : 26186930)@photosystem I reaction center subunit IV A, chloroplast precursor, putative, expressed K02693: photosystem I subunit IV
10 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
11 Sobic.004G270400 amino acid permease family protein, putative, expressed -
12 Sobic.004G187100 BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
13 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
14 Sobic.004G302600 cyclin-T1-2, putative, expressed K15188: cyclin T
15 Sobic.002G314200 ATP-dependent protease, putative, expressed -
16 Sobic.001G417200 ATP synthase B chain, chloroplast precursor, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
17 Sobic.003G413800 cytochrome P450, putative, expressed -
18 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
19 Sobic.009G055800 expressed protein -
20 Sobic.008G022600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@E2F-related protein, putative, expressed -


Gene co-expression network
sample Sobic003G107100 Sobic003G107100 Sobic003G336200 Sobic003G336200 Sobic003G107100--Sobic003G336200 Sobic001G077100 Sobic001G077100 Sobic003G107100--Sobic001G077100 Sobic004G033900 Sobic004G033900 Sobic003G107100--Sobic004G033900 Sobic002G088200 Sobic002G088200 Sobic003G107100--Sobic002G088200 Sobic002G256000 Sobic002G256000 Sobic003G107100--Sobic002G256000 Sobic010G082800 Sobic010G082800 Sobic003G107100--Sobic010G082800 Sobic010G244600 Sobic010G244600 Sobic003G107100--Sobic010G244600 Sobic001G543500 Sobic001G543500 Sobic003G107100--Sobic001G543500 Sobic002G119500 Sobic002G119500 Sobic003G107100--Sobic002G119500 Sobic003G336200--Sobic010G244600 Sobic004G072000 Sobic004G072000 Sobic003G336200--Sobic004G072000 Sobic003G336200--Sobic001G543500 Sobic003G336200--Sobic002G088200 Sobic003G336200--Sobic003G107100 Sobic009G255300 Sobic009G255300 Sobic003G336200--Sobic009G255300 Sobic005G169800 Sobic005G169800 Sobic003G336200--Sobic005G169800 Sobic004G034500 Sobic004G034500 Sobic003G336200--Sobic004G034500 Sobic007G204400 Sobic007G204400 Sobic003G336200--Sobic007G204400 Sobic008G022600 Sobic008G022600 Sobic001G077100--Sobic008G022600 Sobic001G407900 Sobic001G407900 Sobic001G077100--Sobic001G407900 Sobic004G270400 Sobic004G270400 Sobic001G077100--Sobic004G270400 Sobic001G077100--Sobic010G082800 Sobic001G339100 Sobic001G339100 Sobic001G077100--Sobic001G339100 Sobic007G076900 Sobic007G076900 Sobic001G077100--Sobic007G076900 Sobic004G017200 Sobic004G017200 Sobic001G077100--Sobic004G017200 Sobic003G088800 Sobic003G088800 Sobic001G077100--Sobic003G088800 Sobic010G060000 Sobic010G060000 Sobic001G077100--Sobic010G060000 Sobic004G033900--Sobic002G088200 Sobic004G033900--Sobic004G034500 Sobic004G033900--Sobic001G543500 Sobic005G052000 Sobic005G052000 Sobic004G033900--Sobic005G052000 Sobic001G516800 Sobic001G516800 Sobic004G033900--Sobic001G516800 Sobic010G108500 Sobic010G108500 Sobic004G033900--Sobic010G108500 Sobic001G310800 Sobic001G310800 Sobic004G033900--Sobic001G310800 Sobic004G033900--Sobic010G082800 Sobic006G118000 Sobic006G118000 Sobic004G033900--Sobic006G118000 Sobic002G088200--Sobic001G543500 Sobic002G088200--Sobic001G516800 Sobic002G088200--Sobic004G033900 Sobic003G264700 Sobic003G264700 Sobic002G088200--Sobic003G264700 Sobic002G088200--Sobic002G256000 Sobic002G088200--Sobic006G118000 Sobic002G088200--Sobic002G119500 Sobic001G147400 Sobic001G147400 Sobic002G088200--Sobic001G147400 Sobic010G208000 Sobic010G208000 Sobic002G088200--Sobic010G208000 Sobic001G417200 Sobic001G417200 Sobic002G256000--Sobic001G417200 Sobic002G256000--Sobic010G082800 Sobic006G125000 Sobic006G125000 Sobic002G256000--Sobic006G125000 Sobic004G343100 Sobic004G343100 Sobic002G256000--Sobic004G343100 Sobic008G063100 Sobic008G063100 Sobic002G256000--Sobic008G063100 Sobic001G035800 Sobic001G035800 Sobic002G256000--Sobic001G035800 Sobic001G498300 Sobic001G498300 Sobic002G256000--Sobic001G498300 Sobic005G021600 Sobic005G021600 Sobic002G256000--Sobic005G021600 Sobic003G187000 Sobic003G187000 Sobic002G256000--Sobic003G187000 Sobic010G082800--Sobic002G256000 Sobic010G082800--Sobic005G021600 Sobic009G138900 Sobic009G138900 Sobic010G082800--Sobic009G138900 Sobic009G253000 Sobic009G253000 Sobic010G082800--Sobic009G253000 Sobic010G082800--Sobic008G063100 Sobic003G421400 Sobic003G421400 Sobic010G082800--Sobic003G421400 Sobic002G038300 Sobic002G038300 Sobic010G082800--Sobic002G038300 Sobic002G386400 Sobic002G386400 Sobic010G082800--Sobic002G386400 Sobic002G195700 Sobic002G195700 Sobic010G082800--Sobic002G195700 Sobic010G244600--Sobic007G204400 Sobic010G244600--Sobic004G072000 Sobic005G208500 Sobic005G208500 Sobic010G244600--Sobic005G208500 Sobic010G244600--Sobic003G336200 Sobic005G005500 Sobic005G005500 Sobic010G244600--Sobic005G005500 Sobic006G204000 Sobic006G204000 Sobic010G244600--Sobic006G204000 Sobic003G309600 Sobic003G309600 Sobic010G244600--Sobic003G309600 Sobic007G013500 Sobic007G013500 Sobic010G244600--Sobic007G013500 Sobic010G244600--Sobic001G543500 Sobic001G543500--Sobic002G088200 Sobic001G543500--Sobic004G072000 Sobic008G139900 Sobic008G139900 Sobic001G543500--Sobic008G139900 Sobic001G543500--Sobic001G516800 Sobic001G543500--Sobic010G208000 Sobic001G543500--Sobic004G034500 Sobic001G543500--Sobic004G033900 Sobic001G543500--Sobic005G005500 Sobic002G314200 Sobic002G314200 Sobic001G543500--Sobic002G314200 Sobic002G242000 Sobic002G242000 Sobic002G119500--Sobic002G242000 Sobic001G070500 Sobic001G070500 Sobic002G119500--Sobic001G070500 Sobic004G056900 Sobic004G056900 Sobic002G119500--Sobic004G056900 Sobic009G130700 Sobic009G130700 Sobic002G119500--Sobic009G130700 Sobic002G033900 Sobic002G033900 Sobic002G119500--Sobic002G033900 Sobic001G364100 Sobic001G364100 Sobic002G119500--Sobic001G364100 Sobic001G078000 Sobic001G078000 Sobic002G119500--Sobic001G078000 Sobic001G046900 Sobic001G046900 Sobic002G119500--Sobic001G046900 Sobic002G329600 Sobic002G329600 Sobic002G119500--Sobic002G329600
Octagon: transcription factors


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