Gene annotation
Transcriptome id Sobic.003G336200.1
Synonym Sb03g038040
Functional annotation expressed protein
UniProt A0A1W0W065
Pfam -
Panther DB PTHR33825 PTHR33825:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G09995 : -
RAP-DB (Rice) LOC_Os06g12129.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G336200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G244600 nifU, putative, expressed -
2 Sobic.004G072000 ribosome, putative, expressed -
3 Sobic.001G543500 "generic sugar transporter, up-regulated under drought stress "(PubMedID : 24655390)@Putative ortholog gene associated with awn presence/absence in wheat(PubMedID : 25237112)@transporter family protein, putative, expressed -
4 Sobic.002G088200 expressed protein -
5 Sobic.003G107100 peptide transporter PTR2, putative, expressed -
6 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
7 Sobic.005G169800 GTPase of unknown function domain containing protein, putative, expressed K03665: GTPase
8 Sobic.004G034500 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
9 Sobic.007G204400 expressed protein -
10 Sobic.008G139900 expressed protein -
11 Sobic.001G168000 OsFBD13 - F-box and FBD domain containing protein, expressed -
12 Sobic.009G237800 expressed protein -
13 Sobic.002G314200 ATP-dependent protease, putative, expressed -
14 Sobic.006G118000 expressed protein -
15 Sobic.003G264700 expressed protein -
16 Sobic.004G033900 expressed protein -
17 Sobic.006G204000 "Ascorbate peroxidase,heme binding / peroxidase (Os)"(PubMedID : 27208977)@Ascorbate peroxidasel heme binding / peroxidase (Os)(PubMedID : 27208977)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase
18 Sobic.004G204500 expressed protein -
19 Sobic.010G208000 ribosomal protein L35, putative, expressed K02916: RP-L35, MRPL35, large subunit ribosomal protein L35
20 Sobic.002G228400 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic003G336200 Sobic003G336200 Sobic010G244600 Sobic010G244600 Sobic003G336200--Sobic010G244600 Sobic004G072000 Sobic004G072000 Sobic003G336200--Sobic004G072000 Sobic001G543500 Sobic001G543500 Sobic003G336200--Sobic001G543500 Sobic002G088200 Sobic002G088200 Sobic003G336200--Sobic002G088200 Sobic003G107100 Sobic003G107100 Sobic003G336200--Sobic003G107100 Sobic009G255300 Sobic009G255300 Sobic003G336200--Sobic009G255300 Sobic005G169800 Sobic005G169800 Sobic003G336200--Sobic005G169800 Sobic004G034500 Sobic004G034500 Sobic003G336200--Sobic004G034500 Sobic007G204400 Sobic007G204400 Sobic003G336200--Sobic007G204400 Sobic010G244600--Sobic007G204400 Sobic010G244600--Sobic004G072000 Sobic005G208500 Sobic005G208500 Sobic010G244600--Sobic005G208500 Sobic010G244600--Sobic003G336200 Sobic005G005500 Sobic005G005500 Sobic010G244600--Sobic005G005500 Sobic006G204000 Sobic006G204000 Sobic010G244600--Sobic006G204000 Sobic003G309600 Sobic003G309600 Sobic010G244600--Sobic003G309600 Sobic007G013500 Sobic007G013500 Sobic010G244600--Sobic007G013500 Sobic010G244600--Sobic001G543500 Sobic010G208000 Sobic010G208000 Sobic004G072000--Sobic010G208000 Sobic004G072000--Sobic004G034500 Sobic004G072000--Sobic010G244600 Sobic008G139900 Sobic008G139900 Sobic004G072000--Sobic008G139900 Sobic004G072000--Sobic007G204400 Sobic001G115800 Sobic001G115800 Sobic004G072000--Sobic001G115800 Sobic008G131200 Sobic008G131200 Sobic004G072000--Sobic008G131200 Sobic004G072000--Sobic006G204000 Sobic010G258700 Sobic010G258700 Sobic004G072000--Sobic010G258700 Sobic001G543500--Sobic002G088200 Sobic001G543500--Sobic004G072000 Sobic001G543500--Sobic008G139900 Sobic001G516800 Sobic001G516800 Sobic001G543500--Sobic001G516800 Sobic001G543500--Sobic010G208000 Sobic001G543500--Sobic004G034500 Sobic004G033900 Sobic004G033900 Sobic001G543500--Sobic004G033900 Sobic001G543500--Sobic005G005500 Sobic002G314200 Sobic002G314200 Sobic001G543500--Sobic002G314200 Sobic002G088200--Sobic001G543500 Sobic002G088200--Sobic001G516800 Sobic002G088200--Sobic004G033900 Sobic003G264700 Sobic003G264700 Sobic002G088200--Sobic003G264700 Sobic002G256000 Sobic002G256000 Sobic002G088200--Sobic002G256000 Sobic006G118000 Sobic006G118000 Sobic002G088200--Sobic006G118000 Sobic002G119500 Sobic002G119500 Sobic002G088200--Sobic002G119500 Sobic001G147400 Sobic001G147400 Sobic002G088200--Sobic001G147400 Sobic002G088200--Sobic010G208000 Sobic003G107100--Sobic003G336200 Sobic001G077100 Sobic001G077100 Sobic003G107100--Sobic001G077100 Sobic003G107100--Sobic004G033900 Sobic003G107100--Sobic002G088200 Sobic003G107100--Sobic002G256000 Sobic010G082800 Sobic010G082800 Sobic003G107100--Sobic010G082800 Sobic003G107100--Sobic010G244600 Sobic003G107100--Sobic001G543500 Sobic003G107100--Sobic002G119500 Sobic003G179100 Sobic003G179100 Sobic009G255300--Sobic003G179100 Sobic009G255300--Sobic007G013500 Sobic006G278500 Sobic006G278500 Sobic009G255300--Sobic006G278500 Sobic010G036000 Sobic010G036000 Sobic009G255300--Sobic010G036000 Sobic002G285300 Sobic002G285300 Sobic009G255300--Sobic002G285300 Sobic009G255300--Sobic004G072000 Sobic010G073300 Sobic010G073300 Sobic009G255300--Sobic010G073300 Sobic003G440400 Sobic003G440400 Sobic009G255300--Sobic003G440400 Sobic009G255300--Sobic008G139900 Sobic006G280900 Sobic006G280900 Sobic005G169800--Sobic006G280900 Sobic001G204200 Sobic001G204200 Sobic005G169800--Sobic001G204200 Sobic006G146400 Sobic006G146400 Sobic005G169800--Sobic006G146400 Sobic006G222650 Sobic006G222650 Sobic005G169800--Sobic006G222650 Sobic009G236000 Sobic009G236000 Sobic005G169800--Sobic009G236000 Sobic009G083100 Sobic009G083100 Sobic005G169800--Sobic009G083100 Sobic004G302400 Sobic004G302400 Sobic005G169800--Sobic004G302400 Sobic007G119300 Sobic007G119300 Sobic005G169800--Sobic007G119300 Sobic009G082500 Sobic009G082500 Sobic005G169800--Sobic009G082500 Sobic004G034500--Sobic004G072000 Sobic004G034500--Sobic010G208000 Sobic004G034500--Sobic001G516800 Sobic001G030200 Sobic001G030200 Sobic004G034500--Sobic001G030200 Sobic003G246600 Sobic003G246600 Sobic004G034500--Sobic003G246600 Sobic004G066300 Sobic004G066300 Sobic004G034500--Sobic004G066300 Sobic004G034500--Sobic004G033900 Sobic004G034500--Sobic008G131200 Sobic004G034500--Sobic001G543500 Sobic007G204400--Sobic010G244600 Sobic007G204400--Sobic004G072000 Sobic007G204400--Sobic005G208500 Sobic007G204400--Sobic006G204000 Sobic006G127300 Sobic006G127300 Sobic007G204400--Sobic006G127300 Sobic007G204400--Sobic003G264700 Sobic009G125500 Sobic009G125500 Sobic007G204400--Sobic009G125500 Sobic004G023400 Sobic004G023400 Sobic007G204400--Sobic004G023400 Sobic009G237800 Sobic009G237800 Sobic007G204400--Sobic009G237800
Octagon: transcription factors


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