Gene annotation
Transcriptome id Sobic.005G169800.3,Sobic.005G169800.4
Synonym Sb05g023000
Functional annotation GTPase of unknown function domain containing protein, putative, expressed
UniProt A0A1Z5RJ18 , A0A1Z5RJ48
Pfam PF13167 PF16360 PF01926 PF01926 PF16360 PF13167
Panther DB PTHR10229 PTHR10229:SF2 PTHR10229:SF2 PTHR10229
NCBI CDD KOG0410; Predicted GTP binding protein
KEGG Orthology K03665; GTPase
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT5G57960 : GTP-binding protein, HflX
RAP-DB (Rice) LOC_Os11g38020.1 : GTPase of unknown function domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029489
Brachypodium KQJ88002 , KQJ88003
Barley HORVU4Hr1G029760.14 , HORVU4Hr1G029760.16 , HORVU4Hr1G029760.10 , HORVU4Hr1G029760.11 , HORVU4Hr1G029760.12 , HORVU4Hr1G029760.13 , HORVU4Hr1G029760.8 , HORVU4Hr1G029760.9 , HORVU4Hr1G029760.6 , HORVU4Hr1G029760.7 , HORVU4Hr1G029760.4 , HORVU4Hr1G029760.5 , HORVU4Hr1G029760.2 , HORVU4Hr1G029760.3 , HORVU4Hr1G029760.1
Wheat TraesCS4A02G157200 , TraesCS4B02G158600 , TraesCS4D02G150800
Populus -


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cDNA sequences
Sobic.005G169800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G280900 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G204200 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.006G146400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
4 Sobic.006G222650 - -
5 Sobic.009G236000 GATA zinc finger domain containing protein, expressed -
6 Sobic.009G083100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G302400 NAC domain containing protein, putative, expressed -
8 Sobic.007G119300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
9 Sobic.009G082500 - -
10 Sobic.001G176800 - -
11 Sobic.002G065300 OsSub58 - Putative Subtilisin homologue, expressed -
12 Sobic.009G174600 OsFBX407 - F-box domain containing protein, expressed -
13 Sobic.001G096800 uncharacterized UPF0114 domain containing protein, expressed -
14 Sobic.005G001600 IBR domain containing protein, expressed -
15 Sobic.003G161200 - -
16 Sobic.004G269500 transcription factor TF2, putative, expressed -
17 Sobic.008G112400 - -
18 Sobic.007G090406 - -
19 Sobic.009G250800 Up-reguralion under heat(PubMedID : 24916767)@polygalacturonase, putative, expressed -
20 Sobic.003G202900 expressed protein -


Gene co-expression network
sample Sobic005G169800 Sobic005G169800 Sobic006G280900 Sobic006G280900 Sobic005G169800--Sobic006G280900 Sobic001G204200 Sobic001G204200 Sobic005G169800--Sobic001G204200 Sobic006G146400 Sobic006G146400 Sobic005G169800--Sobic006G146400 Sobic006G222650 Sobic006G222650 Sobic005G169800--Sobic006G222650 Sobic009G236000 Sobic009G236000 Sobic005G169800--Sobic009G236000 Sobic009G083100 Sobic009G083100 Sobic005G169800--Sobic009G083100 Sobic004G302400 Sobic004G302400 Sobic005G169800--Sobic004G302400 Sobic007G119300 Sobic007G119300 Sobic005G169800--Sobic007G119300 Sobic009G082500 Sobic009G082500 Sobic005G169800--Sobic009G082500 Sobic006G280900--Sobic006G146400 Sobic006G280900--Sobic006G222650 Sobic006G280900--Sobic004G302400 Sobic001G537600 Sobic001G537600 Sobic006G280900--Sobic001G537600 Sobic006G280900--Sobic009G083100 Sobic009G238200 Sobic009G238200 Sobic006G280900--Sobic009G238200 Sobic002G116300 Sobic002G116300 Sobic006G280900--Sobic002G116300 Sobic010G106400 Sobic010G106400 Sobic006G280900--Sobic010G106400 Sobic010G035300 Sobic010G035300 Sobic006G280900--Sobic010G035300 Sobic009G258150 Sobic009G258150 Sobic001G204200--Sobic009G258150 Sobic009G250800 Sobic009G250800 Sobic001G204200--Sobic009G250800 Sobic006G103601 Sobic006G103601 Sobic001G204200--Sobic006G103601 Sobic010G244701 Sobic010G244701 Sobic001G204200--Sobic010G244701 Sobic010G257300 Sobic010G257300 Sobic001G204200--Sobic010G257300 Sobic002G076932 Sobic002G076932 Sobic001G204200--Sobic002G076932 Sobic008G166250 Sobic008G166250 Sobic001G204200--Sobic008G166250 Sobic005G094500 Sobic005G094500 Sobic001G204200--Sobic005G094500 Sobic003G379500 Sobic003G379500 Sobic001G204200--Sobic003G379500 Sobic006G146400--Sobic006G280900 Sobic006G146400--Sobic006G222650 Sobic006G146400--Sobic002G116300 Sobic006G146400--Sobic009G238200 Sobic006G146400--Sobic001G537600 Sobic006G146400--Sobic004G302400 Sobic006G146400--Sobic010G035300 Sobic006G146400--Sobic006G103601 Sobic006G146400--Sobic003G379500 Sobic006G222650--Sobic004G302400 Sobic006G222650--Sobic010G035300 Sobic006G222650--Sobic002G116300 Sobic006G222650--Sobic006G146400 Sobic004G269500 Sobic004G269500 Sobic006G222650--Sobic004G269500 Sobic006G222650--Sobic006G280900 Sobic004G302550 Sobic004G302550 Sobic006G222650--Sobic004G302550 Sobic006G162300 Sobic006G162300 Sobic006G222650--Sobic006G162300 Sobic002G065300 Sobic002G065300 Sobic006G222650--Sobic002G065300 Sobic002G282000 Sobic002G282000 Sobic009G236000--Sobic002G282000 Sobic009G236000--Sobic009G082500 Sobic001G096800 Sobic001G096800 Sobic009G236000--Sobic001G096800 Sobic009G236000--Sobic006G146400 Sobic009G236000--Sobic009G083100 Sobic009G236000--Sobic006G280900 Sobic005G001600 Sobic005G001600 Sobic009G236000--Sobic005G001600 Sobic008G192800 Sobic008G192800 Sobic009G236000--Sobic008G192800 Sobic009G114900 Sobic009G114900 Sobic009G236000--Sobic009G114900 Sobic009G083100--Sobic006G280900 Sobic007G090406 Sobic007G090406 Sobic009G083100--Sobic007G090406 Sobic009G083100--Sobic006G146400 Sobic009G083100--Sobic001G537600 Sobic009G083100--Sobic009G236000 Sobic009G083100--Sobic001G096800 Sobic009G083100--Sobic009G114900 Sobic009G083100--Sobic008G192800 Sobic009G083100--Sobic006G222650 Sobic004G302400--Sobic006G222650 Sobic009G174600 Sobic009G174600 Sobic004G302400--Sobic009G174600 Sobic004G302400--Sobic010G035300 Sobic004G302400--Sobic002G116300 Sobic004G302400--Sobic006G162300 Sobic004G302400--Sobic002G065300 Sobic004G302400--Sobic009G238200 Sobic004G302400--Sobic006G146400 Sobic004G302400--Sobic006G280900 Sobic002G426650 Sobic002G426650 Sobic007G119300--Sobic002G426650 Sobic008G112400 Sobic008G112400 Sobic007G119300--Sobic008G112400 Sobic007G119300--Sobic005G001600 Sobic007G119300--Sobic002G065300 Sobic007G119300--Sobic006G280900 Sobic007G119300--Sobic004G302400 Sobic007G119300--Sobic006G222650 Sobic007G119300--Sobic009G174600 Sobic007G119300--Sobic004G302550 Sobic009G082500--Sobic002G282000 Sobic009G082500--Sobic008G112400 Sobic007G016300 Sobic007G016300 Sobic009G082500--Sobic007G016300 Sobic003G043650 Sobic003G043650 Sobic009G082500--Sobic003G043650 Sobic009G082500--Sobic009G236000 Sobic009G082500--Sobic005G001600 Sobic002G346250 Sobic002G346250 Sobic009G082500--Sobic002G346250 Sobic004G200000 Sobic004G200000 Sobic009G082500--Sobic004G200000 Sobic002G038200 Sobic002G038200 Sobic009G082500--Sobic002G038200
Octagon: transcription factors


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