Gene annotation
Transcriptome id Sobic.004G204500.3,Sobic.004G204500.1,Sobic.004G204500.2
Synonym Sb04g025070
Functional annotation expressed protein
UniProt A0A1Z5RND7 , A0A194YRV2 , A0A194YQU0
Pfam -
Panther DB PTHR11804 PTHR11804:SF42
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67700 : -
RAP-DB (Rice) LOC_Os02g38820.1 : expressed protein
MaizeGDB (Corn) Zm00025a021286
Brachypodium KQK00200 , KQK00199 , KQK00198 , KQK00193 , KQK00192 , KQK00197 , KQK00196 , KQK00195 , KQK00194
Barley HORVU6Hr1G054110.3 , HORVU6Hr1G054110.2 , HORVU6Hr1G054110.1 , HORVU6Hr1G054110.6 , HORVU6Hr1G054110.5 , HORVU6Hr1G054110.4
Wheat TraesCS6B02G242800 , TraesCS6A02G212200 , TraesCS6D02G195400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G381900 PRC-barrel domain protein, putative, expressed -
2 Sobic.004G023400 expressed protein -
3 Sobic.010G208000 ribosomal protein L35, putative, expressed K02916: RP-L35, MRPL35, large subunit ribosomal protein L35
4 Sobic.003G264700 expressed protein -
5 Sobic.003G211500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.009G237800 expressed protein -
7 Sobic.003G132300 MYB family transcription factor, putative, expressed -
8 Sobic.006G229300 receptor-like kinase, putative, expressed -
9 Sobic.005G128100 acyl carrier protein, putative, expressed -
10 Sobic.004G072000 ribosome, putative, expressed -
11 Sobic.003G408000 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
12 Sobic.010G268100 pseudouridine synthase family protein, putative, expressed K15452: mitochondrial tRNA pseudouridine27/28 synthase
13 Sobic.004G132400 lectin-like receptor kinase, putative, expressed -
14 Sobic.001G516800 signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed K12271: SRP43, signal recognition particle 43 kDa protein
15 Sobic.003G256200 ribosomal protein rpS20, putative, expressed K02968: RP-S20, small subunit ribosomal protein S20
16 Sobic.009G179800 - -
17 Sobic.001G147400 Ferredoxin(PubMedID : 26186930)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
18 Sobic.003G230400 50S ribosomal protein L31, putative, expressed K02909: RP-L31, large subunit ribosomal protein L31
19 Sobic.002G077000 NAD dependent epimerase/dehydratase family protein, putative, expressed -
20 Sobic.009G055800 expressed protein -


Gene co-expression network
sample Sobic004G204500 Sobic004G204500 Sobic001G381900 Sobic001G381900 Sobic004G204500--Sobic001G381900 Sobic004G023400 Sobic004G023400 Sobic004G204500--Sobic004G023400 Sobic010G208000 Sobic010G208000 Sobic004G204500--Sobic010G208000 Sobic003G264700 Sobic003G264700 Sobic004G204500--Sobic003G264700 Sobic003G211500 Sobic003G211500 Sobic004G204500--Sobic003G211500 Sobic009G237800 Sobic009G237800 Sobic004G204500--Sobic009G237800 Sobic003G132300 Sobic003G132300 Sobic004G204500--Sobic003G132300 Sobic006G229300 Sobic006G229300 Sobic004G204500--Sobic006G229300 Sobic005G128100 Sobic005G128100 Sobic004G204500--Sobic005G128100 Sobic001G381900--Sobic004G204500 Sobic004G123600 Sobic004G123600 Sobic001G381900--Sobic004G123600 Sobic001G381900--Sobic003G211500 Sobic010G268100 Sobic010G268100 Sobic001G381900--Sobic010G268100 Sobic004G119500 Sobic004G119500 Sobic001G381900--Sobic004G119500 Sobic004G123300 Sobic004G123300 Sobic001G381900--Sobic004G123300 Sobic006G248700 Sobic006G248700 Sobic001G381900--Sobic006G248700 Sobic001G381900--Sobic003G132300 Sobic001G381900--Sobic009G237800 Sobic004G023400--Sobic004G204500 Sobic004G023400--Sobic003G264700 Sobic003G309700 Sobic003G309700 Sobic004G023400--Sobic003G309700 Sobic004G023400--Sobic003G132300 Sobic007G204400 Sobic007G204400 Sobic004G023400--Sobic007G204400 Sobic004G023400--Sobic009G237800 Sobic006G127300 Sobic006G127300 Sobic004G023400--Sobic006G127300 Sobic009G179800 Sobic009G179800 Sobic004G023400--Sobic009G179800 Sobic004G023400--Sobic010G208000 Sobic001G030200 Sobic001G030200 Sobic010G208000--Sobic001G030200 Sobic001G516800 Sobic001G516800 Sobic010G208000--Sobic001G516800 Sobic004G072000 Sobic004G072000 Sobic010G208000--Sobic004G072000 Sobic004G034500 Sobic004G034500 Sobic010G208000--Sobic004G034500 Sobic002G019900 Sobic002G019900 Sobic010G208000--Sobic002G019900 Sobic008G131200 Sobic008G131200 Sobic010G208000--Sobic008G131200 Sobic010G208000--Sobic009G179800 Sobic010G208000--Sobic004G204500 Sobic004G066300 Sobic004G066300 Sobic010G208000--Sobic004G066300 Sobic003G264700--Sobic004G023400 Sobic003G264700--Sobic004G204500 Sobic003G264700--Sobic007G204400 Sobic002G088200 Sobic002G088200 Sobic003G264700--Sobic002G088200 Sobic003G264700--Sobic003G309700 Sobic003G264700--Sobic009G237800 Sobic010G042400 Sobic010G042400 Sobic003G264700--Sobic010G042400 Sobic003G264700--Sobic001G381900 Sobic001G543500 Sobic001G543500 Sobic003G264700--Sobic001G543500 Sobic007G132000 Sobic007G132000 Sobic003G211500--Sobic007G132000 Sobic003G211500--Sobic003G132300 Sobic003G211500--Sobic001G381900 Sobic004G132400 Sobic004G132400 Sobic003G211500--Sobic004G132400 Sobic003G211500--Sobic004G204500 Sobic003G211500--Sobic006G229300 Sobic003G211500--Sobic004G119500 Sobic003G211500--Sobic004G023400 Sobic001G147400 Sobic001G147400 Sobic003G211500--Sobic001G147400 Sobic002G077000 Sobic002G077000 Sobic009G237800--Sobic002G077000 Sobic009G237800--Sobic004G204500 Sobic009G237800--Sobic004G023400 Sobic009G237800--Sobic007G204400 Sobic009G237800--Sobic005G128100 Sobic009G237800--Sobic003G264700 Sobic001G337600 Sobic001G337600 Sobic009G237800--Sobic001G337600 Sobic009G237800--Sobic004G072000 Sobic010G244600 Sobic010G244600 Sobic009G237800--Sobic010G244600 Sobic003G132300--Sobic006G229300 Sobic003G305300 Sobic003G305300 Sobic003G132300--Sobic003G305300 Sobic003G132300--Sobic004G132400 Sobic003G132300--Sobic003G211500 Sobic004G202600 Sobic004G202600 Sobic003G132300--Sobic004G202600 Sobic009G212000 Sobic009G212000 Sobic003G132300--Sobic009G212000 Sobic003G132300--Sobic009G179800 Sobic002G215000 Sobic002G215000 Sobic003G132300--Sobic002G215000 Sobic003G132300--Sobic004G023400 Sobic006G229300--Sobic003G132300 Sobic002G305700 Sobic002G305700 Sobic006G229300--Sobic002G305700 Sobic003G433900 Sobic003G433900 Sobic006G229300--Sobic003G433900 Sobic003G256200 Sobic003G256200 Sobic006G229300--Sobic003G256200 Sobic006G107600 Sobic006G107600 Sobic006G229300--Sobic006G107600 Sobic004G298100 Sobic004G298100 Sobic006G229300--Sobic004G298100 Sobic001G035800 Sobic001G035800 Sobic006G229300--Sobic001G035800 Sobic006G229300--Sobic009G212000 Sobic009G055800 Sobic009G055800 Sobic006G229300--Sobic009G055800 Sobic003G393800 Sobic003G393800 Sobic005G128100--Sobic003G393800 Sobic005G128100--Sobic009G179800 Sobic005G128100--Sobic002G077000 Sobic001G411300 Sobic001G411300 Sobic005G128100--Sobic001G411300 Sobic005G128100--Sobic003G256200 Sobic002G343700 Sobic002G343700 Sobic005G128100--Sobic002G343700 Sobic003G246600 Sobic003G246600 Sobic005G128100--Sobic003G246600 Sobic001G427000 Sobic001G427000 Sobic005G128100--Sobic001G427000 Sobic003G132600 Sobic003G132600 Sobic005G128100--Sobic003G132600
Octagon: transcription factors


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