Gene annotation
Transcriptome id Sobic.003G132300.1
Synonym Sb03g011280
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5XHB0
Pfam PF00249
Panther DB PTHR24078 PTHR24078:SF261
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G49010 : Duplicated homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os01g34060.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a024152 , Zm00025a043800 , Zm00025a037205 , Zm00025a035199 , Zm00025a043782 , Zm00025a026822
Brachypodium KQK05980 , KQK04515 , KQK10731
Barley HORVU3Hr1G083740.3 , HORVU3Hr1G083740.2 , HORVU3Hr1G083740.1 , HORVU3Hr1G083740.5 , HORVU3Hr1G083740.4 , HORVU2Hr1G119610.2 , HORVU0Hr1G018970.2 , HORVU0Hr1G018970.1 , HORVU2Hr1G119610.1 , HORVU2Hr1G119610.3 , HORVU2Hr1G119610.4
Wheat TraesCS3A02G375500 , TraesCS3D02G360500 , TraesCS7A02G036100 , TraesCS1A02G278900 , TraesCS1D02G278200 , TraesCS3D02G368000 , TraesCS3A02G367600 , TraesCS2A02G554200 , TraesCS1B02G287700 , TraesCS3B02G407700 , TraesCS3B02G399300 , TraesCS2B02G589700 , TraesCS7D02G032700 , TraesCS4A02G452600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G229300 receptor-like kinase, putative, expressed -
2 Sobic.003G305300 - -
3 Sobic.004G132400 lectin-like receptor kinase, putative, expressed -
4 Sobic.003G211500 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.004G202600 rhodanese family protein, putative, expressed -
6 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
7 Sobic.009G179800 - -
8 Sobic.002G215000 chlorophyll A-B binding protein, putative, expressed K08908: light-harvesting complex I chlorophyll a/b binding protein 2
9 Sobic.004G023400 expressed protein -
10 Sobic.004G204500 expressed protein -
11 Sobic.009G130700 lumen 18.3kDa protein(PubMedID : 29017446)@thylakoid lumen protein, putative, expressed -
12 Sobic.001G147400 Ferredoxin(PubMedID : 26186930)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
13 Sobic.001G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium homeostasis regulator CHoR1, putative, expressed -
14 Sobic.004G298100 50S ribosomal protein L19, chloroplast precursor, putative, expressed K02884: RP-L19, MRPL19, large subunit ribosomal protein L19
15 Sobic.003G256200 ribosomal protein rpS20, putative, expressed K02968: RP-S20, small subunit ribosomal protein S20
16 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
17 Sobic.010G072900 peroxiredoxin, putative, expressed K03564: BCP, PRXQ, thioredoxin-dependent peroxiredoxin
18 Sobic.003G433900 expressed protein -
19 Sobic.006G060200 basic proline-rich protein, putative, expressed -
20 Sobic.002G264800 unknown(PubMedID : 29017446)@expressed protein -


Gene co-expression network
sample Sobic003G132300 Sobic003G132300 Sobic006G229300 Sobic006G229300 Sobic003G132300--Sobic006G229300 Sobic003G305300 Sobic003G305300 Sobic003G132300--Sobic003G305300 Sobic004G132400 Sobic004G132400 Sobic003G132300--Sobic004G132400 Sobic003G211500 Sobic003G211500 Sobic003G132300--Sobic003G211500 Sobic004G202600 Sobic004G202600 Sobic003G132300--Sobic004G202600 Sobic009G212000 Sobic009G212000 Sobic003G132300--Sobic009G212000 Sobic009G179800 Sobic009G179800 Sobic003G132300--Sobic009G179800 Sobic002G215000 Sobic002G215000 Sobic003G132300--Sobic002G215000 Sobic004G023400 Sobic004G023400 Sobic003G132300--Sobic004G023400 Sobic006G229300--Sobic003G132300 Sobic002G305700 Sobic002G305700 Sobic006G229300--Sobic002G305700 Sobic003G433900 Sobic003G433900 Sobic006G229300--Sobic003G433900 Sobic003G256200 Sobic003G256200 Sobic006G229300--Sobic003G256200 Sobic006G107600 Sobic006G107600 Sobic006G229300--Sobic006G107600 Sobic004G298100 Sobic004G298100 Sobic006G229300--Sobic004G298100 Sobic001G035800 Sobic001G035800 Sobic006G229300--Sobic001G035800 Sobic006G229300--Sobic009G212000 Sobic009G055800 Sobic009G055800 Sobic006G229300--Sobic009G055800 Sobic008G131700 Sobic008G131700 Sobic003G305300--Sobic008G131700 Sobic003G305300--Sobic002G215000 Sobic003G305300--Sobic009G212000 Sobic003G305300--Sobic003G132300 Sobic003G074700 Sobic003G074700 Sobic003G305300--Sobic003G074700 Sobic005G084000 Sobic005G084000 Sobic003G305300--Sobic005G084000 Sobic003G305300--Sobic006G229300 Sobic007G210600 Sobic007G210600 Sobic003G305300--Sobic007G210600 Sobic009G136900 Sobic009G136900 Sobic003G305300--Sobic009G136900 Sobic001G147400 Sobic001G147400 Sobic004G132400--Sobic001G147400 Sobic004G132400--Sobic003G132300 Sobic004G132400--Sobic003G211500 Sobic002G285450 Sobic002G285450 Sobic004G132400--Sobic002G285450 Sobic002G283800 Sobic002G283800 Sobic004G132400--Sobic002G283800 Sobic001G516800 Sobic001G516800 Sobic004G132400--Sobic001G516800 Sobic004G204500 Sobic004G204500 Sobic004G132400--Sobic004G204500 Sobic008G147101 Sobic008G147101 Sobic004G132400--Sobic008G147101 Sobic004G132400--Sobic006G229300 Sobic007G132000 Sobic007G132000 Sobic003G211500--Sobic007G132000 Sobic003G211500--Sobic003G132300 Sobic001G381900 Sobic001G381900 Sobic003G211500--Sobic001G381900 Sobic003G211500--Sobic004G132400 Sobic003G211500--Sobic004G204500 Sobic003G211500--Sobic006G229300 Sobic004G119500 Sobic004G119500 Sobic003G211500--Sobic004G119500 Sobic003G211500--Sobic004G023400 Sobic003G211500--Sobic001G147400 Sobic004G202600--Sobic004G298100 Sobic004G202600--Sobic003G256200 Sobic004G054500 Sobic004G054500 Sobic004G202600--Sobic004G054500 Sobic003G246400 Sobic003G246400 Sobic004G202600--Sobic003G246400 Sobic004G317900 Sobic004G317900 Sobic004G202600--Sobic004G317900 Sobic001G427000 Sobic001G427000 Sobic004G202600--Sobic001G427000 Sobic001G191000 Sobic001G191000 Sobic004G202600--Sobic001G191000 Sobic001G027600 Sobic001G027600 Sobic004G202600--Sobic001G027600 Sobic004G114800 Sobic004G114800 Sobic004G202600--Sobic004G114800 Sobic009G212000--Sobic002G305700 Sobic003G202300 Sobic003G202300 Sobic009G212000--Sobic003G202300 Sobic004G191200 Sobic004G191200 Sobic009G212000--Sobic004G191200 Sobic002G190100 Sobic002G190100 Sobic009G212000--Sobic002G190100 Sobic009G212000--Sobic003G256200 Sobic010G095200 Sobic010G095200 Sobic009G212000--Sobic010G095200 Sobic001G453300 Sobic001G453300 Sobic009G212000--Sobic001G453300 Sobic009G212000--Sobic004G298100 Sobic002G200200 Sobic002G200200 Sobic009G212000--Sobic002G200200 Sobic009G130700 Sobic009G130700 Sobic009G179800--Sobic009G130700 Sobic003G393800 Sobic003G393800 Sobic009G179800--Sobic003G393800 Sobic009G179800--Sobic003G246400 Sobic003G246600 Sobic003G246600 Sobic009G179800--Sobic003G246600 Sobic010G072900 Sobic010G072900 Sobic009G179800--Sobic010G072900 Sobic001G411300 Sobic001G411300 Sobic009G179800--Sobic001G411300 Sobic001G382100 Sobic001G382100 Sobic009G179800--Sobic001G382100 Sobic005G128100 Sobic005G128100 Sobic009G179800--Sobic005G128100 Sobic003G239300 Sobic003G239300 Sobic009G179800--Sobic003G239300 Sobic002G215000--Sobic003G074700 Sobic002G215000--Sobic008G131700 Sobic006G060200 Sobic006G060200 Sobic002G215000--Sobic006G060200 Sobic002G215000--Sobic003G305300 Sobic004G068300 Sobic004G068300 Sobic002G215000--Sobic004G068300 Sobic009G164300 Sobic009G164300 Sobic002G215000--Sobic009G164300 Sobic002G077000 Sobic002G077000 Sobic002G215000--Sobic002G077000 Sobic006G222700 Sobic006G222700 Sobic002G215000--Sobic006G222700 Sobic002G215000--Sobic006G229300 Sobic004G023400--Sobic004G204500 Sobic003G264700 Sobic003G264700 Sobic004G023400--Sobic003G264700 Sobic003G309700 Sobic003G309700 Sobic004G023400--Sobic003G309700 Sobic004G023400--Sobic003G132300 Sobic007G204400 Sobic007G204400 Sobic004G023400--Sobic007G204400 Sobic009G237800 Sobic009G237800 Sobic004G023400--Sobic009G237800 Sobic006G127300 Sobic006G127300 Sobic004G023400--Sobic006G127300 Sobic004G023400--Sobic009G179800 Sobic010G208000 Sobic010G208000 Sobic004G023400--Sobic010G208000
Octagon: transcription factors


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