Gene annotation
Transcriptome id Sobic.003G211500.1,Sobic.003G211500.2
Synonym
Functional annotation oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt A0A1B6Q4M6 , A0A1B6Q4H8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G21250 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os02g03100.2,LOC_Os02g03100.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G132000 MYB family transcription factor, putative, expressed -
2 Sobic.003G132300 MYB family transcription factor, putative, expressed -
3 Sobic.001G381900 PRC-barrel domain protein, putative, expressed -
4 Sobic.004G132400 lectin-like receptor kinase, putative, expressed -
5 Sobic.004G204500 expressed protein -
6 Sobic.006G229300 receptor-like kinase, putative, expressed -
7 Sobic.004G119500 peptidase, putative, expressed K03100: signal peptidase I
8 Sobic.004G023400 expressed protein -
9 Sobic.001G147400 Ferredoxin(PubMedID : 26186930)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
10 Sobic.003G305000 Unnamed(PubMedID : 24676859)@CIN-like (ClassII) Subclade 9 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
11 Sobic.004G123600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed K18213: proteinaceous RNase P
12 Sobic.003G264700 expressed protein -
13 Sobic.006G248700 AAA-type ATPase family protein, putative, expressed -
14 Sobic.001G010100 ankyrin repeat domain containing protein, expressed -
15 Sobic.002G200200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
16 Sobic.001G469900 esterase/lipase/thioesterase, putative, expressed -
17 Sobic.010G042400 -(PubMedID : 26465154)@expressed protein -
18 Sobic.003G230400 50S ribosomal protein L31, putative, expressed K02909: RP-L31, large subunit ribosomal protein L31
19 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
20 Sobic.003G110700 nuclear transport factor, putative, expressed -


Gene co-expression network
sample Sobic003G211500 Sobic003G211500 Sobic007G132000 Sobic007G132000 Sobic003G211500--Sobic007G132000 Sobic003G132300 Sobic003G132300 Sobic003G211500--Sobic003G132300 Sobic001G381900 Sobic001G381900 Sobic003G211500--Sobic001G381900 Sobic004G132400 Sobic004G132400 Sobic003G211500--Sobic004G132400 Sobic004G204500 Sobic004G204500 Sobic003G211500--Sobic004G204500 Sobic006G229300 Sobic006G229300 Sobic003G211500--Sobic006G229300 Sobic004G119500 Sobic004G119500 Sobic003G211500--Sobic004G119500 Sobic004G023400 Sobic004G023400 Sobic003G211500--Sobic004G023400 Sobic001G147400 Sobic001G147400 Sobic003G211500--Sobic001G147400 Sobic007G132000--Sobic003G211500 Sobic003G305000 Sobic003G305000 Sobic007G132000--Sobic003G305000 Sobic001G536800 Sobic001G536800 Sobic007G132000--Sobic001G536800 Sobic001G010100 Sobic001G010100 Sobic007G132000--Sobic001G010100 Sobic009G196800 Sobic009G196800 Sobic007G132000--Sobic009G196800 Sobic009G085500 Sobic009G085500 Sobic007G132000--Sobic009G085500 Sobic006G103400 Sobic006G103400 Sobic007G132000--Sobic006G103400 Sobic008G066100 Sobic008G066100 Sobic007G132000--Sobic008G066100 Sobic004G308700 Sobic004G308700 Sobic007G132000--Sobic004G308700 Sobic003G132300--Sobic006G229300 Sobic003G305300 Sobic003G305300 Sobic003G132300--Sobic003G305300 Sobic003G132300--Sobic004G132400 Sobic003G132300--Sobic003G211500 Sobic004G202600 Sobic004G202600 Sobic003G132300--Sobic004G202600 Sobic009G212000 Sobic009G212000 Sobic003G132300--Sobic009G212000 Sobic009G179800 Sobic009G179800 Sobic003G132300--Sobic009G179800 Sobic002G215000 Sobic002G215000 Sobic003G132300--Sobic002G215000 Sobic003G132300--Sobic004G023400 Sobic001G381900--Sobic004G204500 Sobic004G123600 Sobic004G123600 Sobic001G381900--Sobic004G123600 Sobic001G381900--Sobic003G211500 Sobic010G268100 Sobic010G268100 Sobic001G381900--Sobic010G268100 Sobic001G381900--Sobic004G119500 Sobic004G123300 Sobic004G123300 Sobic001G381900--Sobic004G123300 Sobic006G248700 Sobic006G248700 Sobic001G381900--Sobic006G248700 Sobic001G381900--Sobic003G132300 Sobic009G237800 Sobic009G237800 Sobic001G381900--Sobic009G237800 Sobic004G132400--Sobic001G147400 Sobic004G132400--Sobic003G132300 Sobic004G132400--Sobic003G211500 Sobic002G285450 Sobic002G285450 Sobic004G132400--Sobic002G285450 Sobic002G283800 Sobic002G283800 Sobic004G132400--Sobic002G283800 Sobic001G516800 Sobic001G516800 Sobic004G132400--Sobic001G516800 Sobic004G132400--Sobic004G204500 Sobic008G147101 Sobic008G147101 Sobic004G132400--Sobic008G147101 Sobic004G132400--Sobic006G229300 Sobic004G204500--Sobic001G381900 Sobic004G204500--Sobic004G023400 Sobic010G208000 Sobic010G208000 Sobic004G204500--Sobic010G208000 Sobic003G264700 Sobic003G264700 Sobic004G204500--Sobic003G264700 Sobic004G204500--Sobic003G211500 Sobic004G204500--Sobic009G237800 Sobic004G204500--Sobic003G132300 Sobic004G204500--Sobic006G229300 Sobic005G128100 Sobic005G128100 Sobic004G204500--Sobic005G128100 Sobic006G229300--Sobic003G132300 Sobic002G305700 Sobic002G305700 Sobic006G229300--Sobic002G305700 Sobic003G433900 Sobic003G433900 Sobic006G229300--Sobic003G433900 Sobic003G256200 Sobic003G256200 Sobic006G229300--Sobic003G256200 Sobic006G107600 Sobic006G107600 Sobic006G229300--Sobic006G107600 Sobic004G298100 Sobic004G298100 Sobic006G229300--Sobic004G298100 Sobic001G035800 Sobic001G035800 Sobic006G229300--Sobic001G035800 Sobic006G229300--Sobic009G212000 Sobic009G055800 Sobic009G055800 Sobic006G229300--Sobic009G055800 Sobic004G119500--Sobic006G107600 Sobic004G119500--Sobic002G305700 Sobic003G254600 Sobic003G254600 Sobic004G119500--Sobic003G254600 Sobic007G123600 Sobic007G123600 Sobic004G119500--Sobic007G123600 Sobic001G281500 Sobic001G281500 Sobic004G119500--Sobic001G281500 Sobic002G200200 Sobic002G200200 Sobic004G119500--Sobic002G200200 Sobic004G119500--Sobic009G212000 Sobic004G119500--Sobic003G256200 Sobic007G171800 Sobic007G171800 Sobic004G119500--Sobic007G171800 Sobic004G023400--Sobic004G204500 Sobic004G023400--Sobic003G264700 Sobic003G309700 Sobic003G309700 Sobic004G023400--Sobic003G309700 Sobic004G023400--Sobic003G132300 Sobic007G204400 Sobic007G204400 Sobic004G023400--Sobic007G204400 Sobic004G023400--Sobic009G237800 Sobic006G127300 Sobic006G127300 Sobic004G023400--Sobic006G127300 Sobic004G023400--Sobic009G179800 Sobic004G023400--Sobic010G208000 Sobic001G147400--Sobic001G516800 Sobic001G147400--Sobic004G132400 Sobic001G147400--Sobic002G283800 Sobic001G147400--Sobic010G208000 Sobic001G147400--Sobic008G147101 Sobic001G147400--Sobic003G132300 Sobic001G147400--Sobic002G285450 Sobic002G264800 Sobic002G264800 Sobic001G147400--Sobic002G264800 Sobic002G110800 Sobic002G110800 Sobic001G147400--Sobic002G110800
Octagon: transcription factors


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