Gene annotation
Transcriptome id Sobic.010G042400.3
Synonym Sb10g003740
Functional annotation - (PubMedID : 26465154)
expressed protein
UniProt C5Z4C5
Pfam -
Panther DB PTHR34541 PTHR34541:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14830 : -
RAP-DB (Rice) LOC_Os06g05950.1 : expressed protein
MaizeGDB (Corn) Zm00025a041565
Brachypodium -
Barley HORVU7Hr1G023250.11 , HORVU7Hr1G023250.10 , HORVU7Hr1G023250.3 , HORVU7Hr1G023250.9 , HORVU7Hr1G023250.8 , HORVU7Hr1G023250.7 , HORVU7Hr1G023250.4 , HORVU7Hr1G023250.2 , HORVU7Hr1G023250.1
Wheat TraesCS4A02G445200 , TraesCS7B02G007200 , TraesCS7D02G104400 , TraesCS2B02G095300 , TraesCS7A02G109300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G230400 50S ribosomal protein L31, putative, expressed K02909: RP-L31, large subunit ribosomal protein L31
2 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.003G419900 photosystem II reaction center PSB28 protein, chloroplast precursor, putative, expressed K08903: photosystem II 13kDa protein
4 Sobic.003G398800 expressed protein -
5 Sobic.002G370600 - -
6 Sobic.003G408000 ribosomal protein L27, putative, expressed K02899: RP-L27, MRPL27, large subunit ribosomal protein L27
7 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
8 Sobic.004G308700 photosystem I light harvesting complex gene 5(PubMedID : 26465154)@chlorophyll A-B binding protein, putative, expressed K08911: light-harvesting complex I chlorophyll a/b binding protein 5
9 Sobic.003G367500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-1,6-bisphosphatase, putative, expressed K03841: FBP, fructose-1,6-bisphosphatase I
10 Sobic.010G035400 expressed protein -
11 Sobic.010G188300 fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
12 Sobic.004G272100 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
13 Sobic.001G048400 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
14 Sobic.008G102000 Chaperone DnaJ-domain superfamily protein(PubMedID : 26465154)@heat shock protein DnaJ, putative, expressed -
15 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
16 Sobic.007G009200 adenosine monophosphate kinase(PubMedID : 26465154)@AMP kinase(PubMedID : 26976818)@adenylate kinase, putative, expressed K00939: adk, adenylate kinase
17 Sobic.003G002300 Glucose-6-phosphate/phosphate translocator-related(PubMedID : 26465154)@-(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@DUF250 domain containing protein, putative, expressed K15283: solute carrier family 35, member E1
18 Sobic.001G423400 RNA polymerase sigma factor, putative, expressed -
19 Sobic.007G225500 expressed protein -
20 Sobic.001G289500 kinase, pfkB family, putative, expressed -


Gene co-expression network
sample Sobic010G042400 Sobic010G042400 Sobic003G230400 Sobic003G230400 Sobic010G042400--Sobic003G230400 Sobic006G238200 Sobic006G238200 Sobic010G042400--Sobic006G238200 Sobic003G419900 Sobic003G419900 Sobic010G042400--Sobic003G419900 Sobic003G398800 Sobic003G398800 Sobic010G042400--Sobic003G398800 Sobic002G370600 Sobic002G370600 Sobic010G042400--Sobic002G370600 Sobic003G408000 Sobic003G408000 Sobic010G042400--Sobic003G408000 Sobic003G431700 Sobic003G431700 Sobic010G042400--Sobic003G431700 Sobic004G308700 Sobic004G308700 Sobic010G042400--Sobic004G308700 Sobic003G367500 Sobic003G367500 Sobic010G042400--Sobic003G367500 Sobic009G043000 Sobic009G043000 Sobic003G230400--Sobic009G043000 Sobic001G417200 Sobic001G417200 Sobic003G230400--Sobic001G417200 Sobic007G052400 Sobic007G052400 Sobic003G230400--Sobic007G052400 Sobic003G230400--Sobic010G042400 Sobic006G067400 Sobic006G067400 Sobic003G230400--Sobic006G067400 Sobic008G171300 Sobic008G171300 Sobic003G230400--Sobic008G171300 Sobic003G002300 Sobic003G002300 Sobic003G230400--Sobic003G002300 Sobic006G093900 Sobic006G093900 Sobic003G230400--Sobic006G093900 Sobic001G519800 Sobic001G519800 Sobic003G230400--Sobic001G519800 Sobic001G491000 Sobic001G491000 Sobic006G238200--Sobic001G491000 Sobic002G275300 Sobic002G275300 Sobic006G238200--Sobic002G275300 Sobic010G181300 Sobic010G181300 Sobic006G238200--Sobic010G181300 Sobic001G100000 Sobic001G100000 Sobic006G238200--Sobic001G100000 Sobic009G237100 Sobic009G237100 Sobic006G238200--Sobic009G237100 Sobic006G238200--Sobic003G398800 Sobic001G289500 Sobic001G289500 Sobic006G238200--Sobic001G289500 Sobic006G238200--Sobic002G370600 Sobic007G225500 Sobic007G225500 Sobic006G238200--Sobic007G225500 Sobic007G181400 Sobic007G181400 Sobic003G419900--Sobic007G181400 Sobic004G353100 Sobic004G353100 Sobic003G419900--Sobic004G353100 Sobic004G359600 Sobic004G359600 Sobic003G419900--Sobic004G359600 Sobic004G202200 Sobic004G202200 Sobic003G419900--Sobic004G202200 Sobic002G233700 Sobic002G233700 Sobic003G419900--Sobic002G233700 Sobic006G140500 Sobic006G140500 Sobic003G419900--Sobic006G140500 Sobic004G028300 Sobic004G028300 Sobic003G419900--Sobic004G028300 Sobic003G419900--Sobic001G289500 Sobic001G015200 Sobic001G015200 Sobic003G419900--Sobic001G015200 Sobic003G398800--Sobic006G238200 Sobic003G306200 Sobic003G306200 Sobic003G398800--Sobic003G306200 Sobic009G056700 Sobic009G056700 Sobic003G398800--Sobic009G056700 Sobic007G009200 Sobic007G009200 Sobic003G398800--Sobic007G009200 Sobic007G103400 Sobic007G103400 Sobic003G398800--Sobic007G103400 Sobic009G129300 Sobic009G129300 Sobic003G398800--Sobic009G129300 Sobic002G220900 Sobic002G220900 Sobic003G398800--Sobic002G220900 Sobic003G398800--Sobic003G431700 Sobic003G398800--Sobic001G491000 Sobic004G305800 Sobic004G305800 Sobic002G370600--Sobic004G305800 Sobic002G370600--Sobic001G491000 Sobic002G370600--Sobic010G181300 Sobic002G370600--Sobic006G238200 Sobic010G245200 Sobic010G245200 Sobic002G370600--Sobic010G245200 Sobic002G370600--Sobic003G431700 Sobic002G370600--Sobic001G289500 Sobic003G370000 Sobic003G370000 Sobic002G370600--Sobic003G370000 Sobic002G370600--Sobic009G043000 Sobic001G405700 Sobic001G405700 Sobic003G408000--Sobic001G405700 Sobic004G012900 Sobic004G012900 Sobic003G408000--Sobic004G012900 Sobic003G408000--Sobic003G419900 Sobic009G131800 Sobic009G131800 Sobic003G408000--Sobic009G131800 Sobic008G039600 Sobic008G039600 Sobic003G408000--Sobic008G039600 Sobic003G077400 Sobic003G077400 Sobic003G408000--Sobic003G077400 Sobic002G405100 Sobic002G405100 Sobic003G408000--Sobic002G405100 Sobic009G055800 Sobic009G055800 Sobic003G408000--Sobic009G055800 Sobic002G401800 Sobic002G401800 Sobic003G408000--Sobic002G401800 Sobic003G431700--Sobic001G519800 Sobic003G431700--Sobic003G398800 Sobic006G207800 Sobic006G207800 Sobic003G431700--Sobic006G207800 Sobic003G431700--Sobic002G370600 Sobic003G431700--Sobic006G238200 Sobic003G431700--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431700--Sobic004G272100 Sobic003G431700--Sobic010G181300 Sobic001G102800 Sobic001G102800 Sobic003G431700--Sobic001G102800 Sobic004G308700--Sobic004G272100 Sobic008G066100 Sobic008G066100 Sobic004G308700--Sobic008G066100 Sobic004G308700--Sobic001G519800 Sobic010G201700 Sobic010G201700 Sobic004G308700--Sobic010G201700 Sobic001G425400 Sobic001G425400 Sobic004G308700--Sobic001G425400 Sobic004G308700--Sobic003G431700 Sobic004G308700--Sobic001G102800 Sobic007G004800 Sobic007G004800 Sobic004G308700--Sobic007G004800 Sobic002G051100 Sobic002G051100 Sobic004G308700--Sobic002G051100 Sobic004G215800 Sobic004G215800 Sobic003G367500--Sobic004G215800 Sobic007G105500 Sobic007G105500 Sobic003G367500--Sobic007G105500 Sobic003G367500--Sobic003G398800 Sobic004G154200 Sobic004G154200 Sobic003G367500--Sobic004G154200 Sobic010G039500 Sobic010G039500 Sobic003G367500--Sobic010G039500 Sobic002G324500 Sobic002G324500 Sobic003G367500--Sobic002G324500 Sobic003G127800 Sobic003G127800 Sobic003G367500--Sobic003G127800 Sobic004G059800 Sobic004G059800 Sobic003G367500--Sobic004G059800 Sobic005G089600 Sobic005G089600 Sobic003G367500--Sobic005G089600
Octagon: transcription factors


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