Gene annotation
Transcriptome id Sobic.010G072900.1,Sobic.010G072900.2
Synonym ATPRXQ, Sb10g006380
Functional annotation peroxiredoxin, putative, expressed
UniProt C5Z5Z4
Pfam PF08534
Panther DB PTHR10681
NCBI CDD -
KEGG Orthology K03564; BCP, PRXQ, thioredoxin-dependent peroxiredoxin
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G26060 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os06g09610.2 : peroxiredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a042440
Brachypodium KQK19149
Barley HORVU7Hr1G033500.2 , HORVU7Hr1G033500.3 , HORVU7Hr1G033500.4 , HORVU7Hr1G033500.5
Wheat TraesCS7B02G065200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G179800 - -
2 Sobic.010G233800 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
3 Sobic.004G298100 50S ribosomal protein L19, chloroplast precursor, putative, expressed K02884: RP-L19, MRPL19, large subunit ribosomal protein L19
4 Sobic.003G246400 ribosomal protein L7/L12 C-terminal domain containing protein, expressed K02935: RP-L7, MRPL12, large subunit ribosomal protein L7/L12
5 Sobic.007G185100 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
6 Sobic.004G317900 expressed protein -
7 Sobic.010G255600 thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed -
8 Sobic.003G393800 30S ribosomal protein S31, chloroplast precursor, putative, expressed K19033: PSRP4, 30S ribosomal protein S31
9 Sobic.001G427000 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
10 Sobic.001G382100 Photosystem II repair protein PSB27-H1(PubMedID : 26186930)@Photosystem II 11 kD protein (Os)(PubMedID : 27208977)@photosystem II 11 kD protein, putative, expressed K08902: photosystem II Psb27 protein
11 Sobic.001G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium homeostasis regulator CHoR1, putative, expressed -
12 Sobic.001G453300 50S ribosomal protein L15, chloroplast precursor, putative, expressed K02876: RP-L15, MRPL15, large subunit ribosomal protein L15
13 Sobic.001G366500 cytochrome P450, putative, expressed -
14 Sobic.004G168500 peroxiredoxin, putative, expressed K03386: PRDX2_4, peroxiredoxin 2/4
15 Sobic.003G246600 plastid-specific 50S ribosomal protein 6, chloroplast precursor, putative, expressed K19035: 50S ribosomal protein 6
16 Sobic.009G130700 lumen 18.3kDa protein(PubMedID : 29017446)@thylakoid lumen protein, putative, expressed -
17 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
18 Sobic.003G328200 thylakoid lumenal 20 kDa protein, putative, expressed -
19 Sobic.003G256200 ribosomal protein rpS20, putative, expressed K02968: RP-S20, small subunit ribosomal protein S20
20 Sobic.004G191200 PsbQ-like protein 1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxygen evolving enhancer protein 3, identical, putative, expressed K08901: photosystem II oxygen-evolving enhancer protein 3


Gene co-expression network
sample Sobic010G072900 Sobic010G072900 Sobic009G179800 Sobic009G179800 Sobic010G072900--Sobic009G179800 Sobic010G233800 Sobic010G233800 Sobic010G072900--Sobic010G233800 Sobic004G298100 Sobic004G298100 Sobic010G072900--Sobic004G298100 Sobic003G246400 Sobic003G246400 Sobic010G072900--Sobic003G246400 Sobic007G185100 Sobic007G185100 Sobic010G072900--Sobic007G185100 Sobic004G317900 Sobic004G317900 Sobic010G072900--Sobic004G317900 Sobic010G255600 Sobic010G255600 Sobic010G072900--Sobic010G255600 Sobic003G393800 Sobic003G393800 Sobic010G072900--Sobic003G393800 Sobic001G427000 Sobic001G427000 Sobic010G072900--Sobic001G427000 Sobic009G130700 Sobic009G130700 Sobic009G179800--Sobic009G130700 Sobic009G179800--Sobic003G393800 Sobic009G179800--Sobic003G246400 Sobic003G246600 Sobic003G246600 Sobic009G179800--Sobic003G246600 Sobic009G179800--Sobic010G072900 Sobic001G411300 Sobic001G411300 Sobic009G179800--Sobic001G411300 Sobic001G382100 Sobic001G382100 Sobic009G179800--Sobic001G382100 Sobic005G128100 Sobic005G128100 Sobic009G179800--Sobic005G128100 Sobic003G239300 Sobic003G239300 Sobic009G179800--Sobic003G239300 Sobic001G076500 Sobic001G076500 Sobic010G233800--Sobic001G076500 Sobic001G453300 Sobic001G453300 Sobic010G233800--Sobic001G453300 Sobic010G233800--Sobic004G317900 Sobic010G233800--Sobic001G427000 Sobic010G233800--Sobic003G393800 Sobic010G233800--Sobic003G246400 Sobic001G027600 Sobic001G027600 Sobic010G233800--Sobic001G027600 Sobic010G233800--Sobic007G185100 Sobic004G116100 Sobic004G116100 Sobic010G233800--Sobic004G116100 Sobic003G256200 Sobic003G256200 Sobic004G298100--Sobic003G256200 Sobic001G391400 Sobic001G391400 Sobic004G298100--Sobic001G391400 Sobic004G298100--Sobic003G246400 Sobic004G298100--Sobic001G453300 Sobic004G298100--Sobic004G116100 Sobic001G240000 Sobic001G240000 Sobic004G298100--Sobic001G240000 Sobic001G527100 Sobic001G527100 Sobic004G298100--Sobic001G527100 Sobic001G040000 Sobic001G040000 Sobic004G298100--Sobic001G040000 Sobic004G298100--Sobic004G317900 Sobic003G246400--Sobic004G317900 Sobic003G246400--Sobic001G411300 Sobic003G246400--Sobic003G256200 Sobic003G246400--Sobic001G453300 Sobic003G328200 Sobic003G328200 Sobic003G246400--Sobic003G328200 Sobic003G246400--Sobic004G298100 Sobic001G191000 Sobic001G191000 Sobic003G246400--Sobic001G191000 Sobic003G246400--Sobic010G233800 Sobic003G246400--Sobic003G393800 Sobic007G185100--Sobic004G317900 Sobic007G185100--Sobic010G255600 Sobic007G185100--Sobic010G233800 Sobic010G215500 Sobic010G215500 Sobic007G185100--Sobic010G215500 Sobic003G295800 Sobic003G295800 Sobic007G185100--Sobic003G295800 Sobic007G170800 Sobic007G170800 Sobic007G185100--Sobic007G170800 Sobic007G185100--Sobic003G328200 Sobic008G030000 Sobic008G030000 Sobic007G185100--Sobic008G030000 Sobic004G076000 Sobic004G076000 Sobic007G185100--Sobic004G076000 Sobic004G317900--Sobic003G246400 Sobic004G317900--Sobic007G185100 Sobic004G317900--Sobic003G295800 Sobic004G317900--Sobic010G233800 Sobic004G317900--Sobic001G027600 Sobic004G317900--Sobic001G453300 Sobic004G317900--Sobic003G328200 Sobic001G017000 Sobic001G017000 Sobic004G317900--Sobic001G017000 Sobic004G054500 Sobic004G054500 Sobic004G317900--Sobic004G054500 Sobic010G255600--Sobic001G382100 Sobic001G203000 Sobic001G203000 Sobic010G255600--Sobic001G203000 Sobic009G091850 Sobic009G091850 Sobic010G255600--Sobic009G091850 Sobic008G051000 Sobic008G051000 Sobic010G255600--Sobic008G051000 Sobic004G036100 Sobic004G036100 Sobic010G255600--Sobic004G036100 Sobic010G255600--Sobic007G185100 Sobic010G255600--Sobic004G054500 Sobic003G099400 Sobic003G099400 Sobic010G255600--Sobic003G099400 Sobic007G116950 Sobic007G116950 Sobic010G255600--Sobic007G116950 Sobic003G393800--Sobic010G233800 Sobic003G393800--Sobic001G076500 Sobic003G393800--Sobic003G246400 Sobic003G393800--Sobic009G179800 Sobic003G393800--Sobic001G427000 Sobic003G393800--Sobic001G453300 Sobic003G393800--Sobic004G116100 Sobic003G393800--Sobic005G128100 Sobic003G393800--Sobic003G246600 Sobic001G427000--Sobic001G076500 Sobic001G427000--Sobic001G027600 Sobic001G427000--Sobic001G453300 Sobic003G132600 Sobic003G132600 Sobic001G427000--Sobic003G132600 Sobic001G427000--Sobic010G233800 Sobic001G427000--Sobic003G256200 Sobic001G427000--Sobic003G393800 Sobic001G427000--Sobic003G246400 Sobic001G383900 Sobic001G383900 Sobic001G427000--Sobic001G383900
Octagon: transcription factors


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