Gene annotation
Transcriptome id Sobic.006G056100.3,Sobic.006G056100.2
Synonym Sb06g014430
Functional annotation expressed protein
UniProt C5YEX2
Pfam -
Panther DB PTHR36899
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G12830 : -
RAP-DB (Rice) LOC_Os04g32470.1 : expressed protein
MaizeGDB (Corn) Zm00025a011697
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G056100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
2 Sobic.004G205300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
3 Sobic.010G202100 expressed protein -
4 Sobic.003G047200 expressed protein -
5 Sobic.008G114500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
6 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
7 Sobic.009G190400 expressed protein -
8 Sobic.001G494300 DNA topoisomerase 3 protein, putative, expressed K03165: DNA topoisomerase III
9 Sobic.002G380600 transcription elongation factor SPT4 homolog 1, putative, expressed K15171: SUPT4H1, transcription elongation factor SPT4
10 Sobic.010G234800 expressed protein -
11 Sobic.007G008300 WD domain, G-beta repeat domain containing protein, expressed K10751: chromatin assembly factor 1 subunit B
12 Sobic.002G293800 expressed protein -
13 Sobic.003G414400 expressed protein -
14 Sobic.004G198200 expressed protein -
15 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
16 Sobic.003G040100 PHD-finger domain containing protein, putative, expressed K11380: NuA3 HAT complex component NTO1
17 Sobic.001G070200 - -
18 Sobic.001G541500 acidic leucine-rich nuclear phosphoprotein 32-related protein 1, putative, expressed -
19 Sobic.002G394200 expressed protein K15711: SMARCA3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3
20 Sobic.006G108000 formin, putative, expressed -


Gene co-expression network
sample Sobic006G056100 Sobic006G056100 Sobic006G155900 Sobic006G155900 Sobic006G056100--Sobic006G155900 Sobic004G205300 Sobic004G205300 Sobic006G056100--Sobic004G205300 Sobic010G202100 Sobic010G202100 Sobic006G056100--Sobic010G202100 Sobic003G047200 Sobic003G047200 Sobic006G056100--Sobic003G047200 Sobic008G114500 Sobic008G114500 Sobic006G056100--Sobic008G114500 Sobic001G098900 Sobic001G098900 Sobic006G056100--Sobic001G098900 Sobic009G190400 Sobic009G190400 Sobic006G056100--Sobic009G190400 Sobic001G494300 Sobic001G494300 Sobic006G056100--Sobic001G494300 Sobic002G380600 Sobic002G380600 Sobic006G056100--Sobic002G380600 Sobic006G155900--Sobic009G190400 Sobic004G198200 Sobic004G198200 Sobic006G155900--Sobic004G198200 Sobic003G040100 Sobic003G040100 Sobic006G155900--Sobic003G040100 Sobic006G155900--Sobic001G494300 Sobic008G020500 Sobic008G020500 Sobic006G155900--Sobic008G020500 Sobic006G155900--Sobic003G047200 Sobic003G414400 Sobic003G414400 Sobic006G155900--Sobic003G414400 Sobic001G070200 Sobic001G070200 Sobic006G155900--Sobic001G070200 Sobic001G331100 Sobic001G331100 Sobic006G155900--Sobic001G331100 Sobic004G205300--Sobic008G114500 Sobic004G279601 Sobic004G279601 Sobic004G205300--Sobic004G279601 Sobic004G205300--Sobic001G070200 Sobic010G215300 Sobic010G215300 Sobic004G205300--Sobic010G215300 Sobic002G293800 Sobic002G293800 Sobic004G205300--Sobic002G293800 Sobic004G205300--Sobic001G098900 Sobic004G205300--Sobic003G414400 Sobic010G234800 Sobic010G234800 Sobic004G205300--Sobic010G234800 Sobic007G017700 Sobic007G017700 Sobic004G205300--Sobic007G017700 Sobic010G202100--Sobic010G215300 Sobic010G202100--Sobic010G234800 Sobic010G202100--Sobic001G098900 Sobic010G202100--Sobic007G017700 Sobic010G202100--Sobic003G414400 Sobic009G025400 Sobic009G025400 Sobic010G202100--Sobic009G025400 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic010G202100--Sobic008G114500 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic001G284900 Sobic001G284900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic008G114500--Sobic010G234800 Sobic008G114500--Sobic010G215300 Sobic008G114500--Sobic004G205300 Sobic008G114500--Sobic007G017700 Sobic008G114500--Sobic001G098900 Sobic008G114500--Sobic010G202100 Sobic008G114500--Sobic002G293800 Sobic008G114500--Sobic003G414400 Sobic008G114500--Sobic004G279601 Sobic001G098900--Sobic010G215300 Sobic001G098900--Sobic010G234800 Sobic001G098900--Sobic010G202100 Sobic001G244400 Sobic001G244400 Sobic001G098900--Sobic001G244400 Sobic001G098900--Sobic003G047200 Sobic001G098900--Sobic003G414400 Sobic001G098900--Sobic002G293800 Sobic001G098900--Sobic008G114500 Sobic001G098900--Sobic006G155900 Sobic009G190400--Sobic003G040100 Sobic009G190400--Sobic006G155900 Sobic009G190400--Sobic004G198200 Sobic009G064600 Sobic009G064600 Sobic009G190400--Sobic009G064600 Sobic003G415500 Sobic003G415500 Sobic009G190400--Sobic003G415500 Sobic009G190400--Sobic008G020500 Sobic002G282100 Sobic002G282100 Sobic009G190400--Sobic002G282100 Sobic004G156600 Sobic004G156600 Sobic009G190400--Sobic004G156600 Sobic009G190400--Sobic001G070200 Sobic001G494300--Sobic006G155900 Sobic001G494300--Sobic008G020500 Sobic001G494300--Sobic004G198200 Sobic001G494300--Sobic003G040100 Sobic007G019600 Sobic007G019600 Sobic001G494300--Sobic007G019600 Sobic001G427400 Sobic001G427400 Sobic001G494300--Sobic001G427400 Sobic001G494300--Sobic003G047200 Sobic009G163700 Sobic009G163700 Sobic001G494300--Sobic009G163700 Sobic007G130000 Sobic007G130000 Sobic001G494300--Sobic007G130000 Sobic002G380600--Sobic006G056100 Sobic003G272300 Sobic003G272300 Sobic002G380600--Sobic003G272300 Sobic006G160200 Sobic006G160200 Sobic002G380600--Sobic006G160200 Sobic004G190600 Sobic004G190600 Sobic002G380600--Sobic004G190600 Sobic002G289800 Sobic002G289800 Sobic002G380600--Sobic002G289800 Sobic001G440900 Sobic001G440900 Sobic002G380600--Sobic001G440900 Sobic001G300400 Sobic001G300400 Sobic002G380600--Sobic001G300400 Sobic006G183600 Sobic006G183600 Sobic002G380600--Sobic006G183600 Sobic001G172800 Sobic001G172800 Sobic002G380600--Sobic001G172800
Octagon: transcription factors


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