Gene annotation
Transcriptome id Sobic.002G293800.1
Synonym Sb02g032480
Functional annotation expressed protein
UniProt C5X7S8
Pfam -
Panther DB PTHR37392 PTHR37392:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g38450.1 : expressed protein
MaizeGDB (Corn) Zm00025a014545 , Zm00025a047921
Brachypodium KQJ91429
Barley HORVU5Hr1G088400.1
Wheat TraesCS5B02G360400 , TraesCS5D02G366900 , TraesCS5A02G357800
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G234800 expressed protein -
2 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
3 Sobic.001G458900 targeting protein-related, putative, expressed -
4 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
5 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.008G114500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
7 Sobic.003G047200 expressed protein -
8 Sobic.010G202100 expressed protein -
9 Sobic.003G414400 expressed protein -
10 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
11 Sobic.001G284900 expressed protein -
12 Sobic.001G077200 BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
13 Sobic.004G205300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
14 Sobic.007G017700 IQ calmodulin-binding motif domain containing protein, expressed -
15 Sobic.003G328500 Expressed in younger stem(PubMedID : 28649278)@cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
16 Sobic.005G056800 FHA domain containing protein, putative, expressed -
17 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
18 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
19 Sobic.001G331100 expressed protein -
20 Sobic.001G075400 expressed protein -


Gene co-expression network
sample Sobic002G293800 Sobic002G293800 Sobic010G234800 Sobic010G234800 Sobic002G293800--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic002G293800--Sobic001G098900 Sobic001G458900 Sobic001G458900 Sobic002G293800--Sobic001G458900 Sobic010G215300 Sobic010G215300 Sobic002G293800--Sobic010G215300 Sobic002G279300 Sobic002G279300 Sobic002G293800--Sobic002G279300 Sobic008G114500 Sobic008G114500 Sobic002G293800--Sobic008G114500 Sobic003G047200 Sobic003G047200 Sobic002G293800--Sobic003G047200 Sobic010G202100 Sobic010G202100 Sobic002G293800--Sobic010G202100 Sobic003G414400 Sobic003G414400 Sobic002G293800--Sobic003G414400 Sobic010G234800--Sobic001G098900 Sobic010G234800--Sobic010G215300 Sobic010G234800--Sobic010G202100 Sobic010G234800--Sobic003G047200 Sobic010G234800--Sobic008G114500 Sobic010G234800--Sobic002G293800 Sobic007G017700 Sobic007G017700 Sobic010G234800--Sobic007G017700 Sobic010G234800--Sobic003G414400 Sobic001G140600 Sobic001G140600 Sobic010G234800--Sobic001G140600 Sobic001G098900--Sobic010G215300 Sobic001G098900--Sobic010G234800 Sobic001G098900--Sobic010G202100 Sobic001G244400 Sobic001G244400 Sobic001G098900--Sobic001G244400 Sobic001G098900--Sobic003G047200 Sobic001G098900--Sobic003G414400 Sobic001G098900--Sobic002G293800 Sobic001G098900--Sobic008G114500 Sobic006G155900 Sobic006G155900 Sobic001G098900--Sobic006G155900 Sobic001G458900--Sobic002G279300 Sobic001G458900--Sobic003G047200 Sobic001G458900--Sobic002G293800 Sobic001G458900--Sobic010G234800 Sobic004G115600 Sobic004G115600 Sobic001G458900--Sobic004G115600 Sobic001G458900--Sobic001G098900 Sobic001G458900--Sobic010G215300 Sobic001G284900 Sobic001G284900 Sobic001G458900--Sobic001G284900 Sobic001G077200 Sobic001G077200 Sobic001G458900--Sobic001G077200 Sobic010G215300--Sobic001G098900 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G215300--Sobic010G202100 Sobic010G215300--Sobic001G140600 Sobic010G215300--Sobic003G047200 Sobic010G215300--Sobic008G114500 Sobic001G540900 Sobic001G540900 Sobic010G215300--Sobic001G540900 Sobic010G215300--Sobic001G284900 Sobic002G279300--Sobic004G115600 Sobic002G279300--Sobic001G458900 Sobic001G331100 Sobic001G331100 Sobic002G279300--Sobic001G331100 Sobic002G279300--Sobic003G047200 Sobic003G300100 Sobic003G300100 Sobic002G279300--Sobic003G300100 Sobic002G279300--Sobic002G293800 Sobic002G279300--Sobic001G098900 Sobic002G279300--Sobic001G077200 Sobic002G279300--Sobic010G234800 Sobic008G114500--Sobic010G234800 Sobic008G114500--Sobic010G215300 Sobic004G205300 Sobic004G205300 Sobic008G114500--Sobic004G205300 Sobic008G114500--Sobic007G017700 Sobic008G114500--Sobic001G098900 Sobic008G114500--Sobic010G202100 Sobic008G114500--Sobic002G293800 Sobic008G114500--Sobic003G414400 Sobic004G279601 Sobic004G279601 Sobic008G114500--Sobic004G279601 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic003G047200--Sobic001G458900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic003G047200--Sobic002G279300 Sobic010G202100--Sobic010G215300 Sobic010G202100--Sobic010G234800 Sobic010G202100--Sobic001G098900 Sobic010G202100--Sobic007G017700 Sobic010G202100--Sobic003G414400 Sobic009G025400 Sobic009G025400 Sobic010G202100--Sobic009G025400 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic010G202100--Sobic008G114500 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic003G414400--Sobic001G098900 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic003G414400--Sobic010G234800 Sobic003G414400--Sobic006G155900 Sobic001G070200 Sobic001G070200 Sobic003G414400--Sobic001G070200 Sobic004G271300 Sobic004G271300 Sobic003G414400--Sobic004G271300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.