Gene annotation
Transcriptome id Sobic.001G077200.2,Sobic.001G077200.1
Synonym Sb01g006980
Functional annotation BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
UniProt C5WZ94 , A0A1Z5S4T4
Pfam PF00651 PF03000 PF03000
Panther DB PTHR32370 PTHR32370:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G66560 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os03g55830.1 : BTBN10 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed
MaizeGDB (Corn) Zm00025a012287 , Zm00025a037943 , Zm00025a053789 , Zm00025a016705 , Zm00025a027282
Brachypodium KQK13013 , KQK10073
Barley HORVU5Hr1G098170.6 , HORVU5Hr1G098170.7 , HORVU5Hr1G098170.4 , HORVU5Hr1G098170.5 , HORVU5Hr1G098170.2 , HORVU5Hr1G098170.3 , HORVU5Hr1G098170.1 , HORVU5Hr1G098170.8 , HORVU5Hr1G098170.9
Wheat TraesCS5A02G403400 , TraesCS5A02G403400 , TraesCS7B02G052800 , TraesCS7B02G052800 , TraesCS7B02G052800 , TraesCS3A02G317300 , TraesCS5D02G413400 , TraesCS5D02G413400 , TraesCS3B02G349200 , TraesCS5B02G408200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G458900 targeting protein-related, putative, expressed -
2 Sobic.002G279300 tetratricopeptide repeat domain containing protein, expressed -
3 Sobic.002G293800 expressed protein -
4 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
5 Sobic.003G300100 bZIP transcription factor domain containing protein, expressed -
6 Sobic.002G139200 transferase family protein, putative, expressed -
7 Sobic.001G284900 expressed protein -
8 Sobic.003G047200 expressed protein -
9 Sobic.003G387600 expressed protein K10750: chromatin assembly factor 1 subunit A
10 Sobic.001G008400 brevis radix, putative, expressed -
11 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
12 Sobic.006G176400 ATROPGEF7/ROPGEF7, putative, expressed -
13 Sobic.004G205300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
14 Sobic.005G056800 FHA domain containing protein, putative, expressed -
15 Sobic.001G070200 - -
16 Sobic.001G331100 expressed protein -
17 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
18 Sobic.001G098900 syntaxin-related protein, putative, expressed K08486: syntaxin 1B/2/3
19 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
20 Sobic.004G198200 expressed protein -


Gene co-expression network
sample Sobic001G077200 Sobic001G077200 Sobic001G458900 Sobic001G458900 Sobic001G077200--Sobic001G458900 Sobic002G279300 Sobic002G279300 Sobic001G077200--Sobic002G279300 Sobic002G293800 Sobic002G293800 Sobic001G077200--Sobic002G293800 Sobic004G115600 Sobic004G115600 Sobic001G077200--Sobic004G115600 Sobic003G300100 Sobic003G300100 Sobic001G077200--Sobic003G300100 Sobic002G139200 Sobic002G139200 Sobic001G077200--Sobic002G139200 Sobic001G284900 Sobic001G284900 Sobic001G077200--Sobic001G284900 Sobic003G047200 Sobic003G047200 Sobic001G077200--Sobic003G047200 Sobic003G387600 Sobic003G387600 Sobic001G077200--Sobic003G387600 Sobic001G458900--Sobic002G279300 Sobic001G458900--Sobic003G047200 Sobic001G458900--Sobic002G293800 Sobic010G234800 Sobic010G234800 Sobic001G458900--Sobic010G234800 Sobic001G458900--Sobic004G115600 Sobic001G098900 Sobic001G098900 Sobic001G458900--Sobic001G098900 Sobic010G215300 Sobic010G215300 Sobic001G458900--Sobic010G215300 Sobic001G458900--Sobic001G284900 Sobic001G458900--Sobic001G077200 Sobic002G279300--Sobic004G115600 Sobic002G279300--Sobic001G458900 Sobic001G331100 Sobic001G331100 Sobic002G279300--Sobic001G331100 Sobic002G279300--Sobic003G047200 Sobic002G279300--Sobic003G300100 Sobic002G279300--Sobic002G293800 Sobic002G279300--Sobic001G098900 Sobic002G279300--Sobic001G077200 Sobic002G279300--Sobic010G234800 Sobic002G293800--Sobic010G234800 Sobic002G293800--Sobic001G098900 Sobic002G293800--Sobic001G458900 Sobic002G293800--Sobic010G215300 Sobic002G293800--Sobic002G279300 Sobic008G114500 Sobic008G114500 Sobic002G293800--Sobic008G114500 Sobic002G293800--Sobic003G047200 Sobic010G202100 Sobic010G202100 Sobic002G293800--Sobic010G202100 Sobic003G414400 Sobic003G414400 Sobic002G293800--Sobic003G414400 Sobic004G115600--Sobic002G279300 Sobic004G115600--Sobic001G331100 Sobic006G278400 Sobic006G278400 Sobic004G115600--Sobic006G278400 Sobic006G108000 Sobic006G108000 Sobic004G115600--Sobic006G108000 Sobic004G227000 Sobic004G227000 Sobic004G115600--Sobic004G227000 Sobic004G115600--Sobic001G458900 Sobic003G301200 Sobic003G301200 Sobic004G115600--Sobic003G301200 Sobic004G115600--Sobic003G300100 Sobic004G115600--Sobic003G047200 Sobic003G300100--Sobic002G279300 Sobic008G156900 Sobic008G156900 Sobic003G300100--Sobic008G156900 Sobic001G397700 Sobic001G397700 Sobic003G300100--Sobic001G397700 Sobic003G300100--Sobic004G115600 Sobic003G300100--Sobic001G331100 Sobic001G253900 Sobic001G253900 Sobic003G300100--Sobic001G253900 Sobic003G300100--Sobic001G458900 Sobic008G083300 Sobic008G083300 Sobic003G300100--Sobic008G083300 Sobic001G451800 Sobic001G451800 Sobic003G300100--Sobic001G451800 Sobic004G326000 Sobic004G326000 Sobic002G139200--Sobic004G326000 Sobic002G139200--Sobic002G279300 Sobic004G176800 Sobic004G176800 Sobic002G139200--Sobic004G176800 Sobic002G139200--Sobic001G077200 Sobic002G139200--Sobic003G300100 Sobic007G168400 Sobic007G168400 Sobic002G139200--Sobic007G168400 Sobic002G390600 Sobic002G390600 Sobic002G139200--Sobic002G390600 Sobic001G008400 Sobic001G008400 Sobic002G139200--Sobic001G008400 Sobic002G139200--Sobic001G458900 Sobic001G284900--Sobic003G414400 Sobic005G056800 Sobic005G056800 Sobic001G284900--Sobic005G056800 Sobic001G284900--Sobic003G047200 Sobic001G284900--Sobic010G215300 Sobic004G271300 Sobic004G271300 Sobic001G284900--Sobic004G271300 Sobic009G025400 Sobic009G025400 Sobic001G284900--Sobic009G025400 Sobic001G427400 Sobic001G427400 Sobic001G284900--Sobic001G427400 Sobic010G017400 Sobic010G017400 Sobic001G284900--Sobic010G017400 Sobic001G284900--Sobic001G098900 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic003G047200--Sobic001G458900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic006G155900 Sobic006G155900 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic003G047200--Sobic002G279300 Sobic006G214000 Sobic006G214000 Sobic003G387600--Sobic006G214000 Sobic003G041700 Sobic003G041700 Sobic003G387600--Sobic003G041700 Sobic006G029300 Sobic006G029300 Sobic003G387600--Sobic006G029300 Sobic001G075400 Sobic001G075400 Sobic003G387600--Sobic001G075400 Sobic010G067900 Sobic010G067900 Sobic003G387600--Sobic010G067900 Sobic008G129200 Sobic008G129200 Sobic003G387600--Sobic008G129200 Sobic004G077100 Sobic004G077100 Sobic003G387600--Sobic004G077100 Sobic010G147700 Sobic010G147700 Sobic003G387600--Sobic010G147700 Sobic001G131300 Sobic001G131300 Sobic003G387600--Sobic001G131300
Octagon: transcription factors


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