Gene annotation
Transcriptome id Sobic.003G387600.1
Synonym FAS1, NFB2, Sb03g042580
Functional annotation expressed protein
UniProt A0A1B6Q7I9
Pfam PF12253
Panther DB PTHR15272 PTHR15272:SF0
NCBI CDD KOG4364; Chromatin assembly factor-I
KEGG Orthology K10750; chromatin assembly factor 1 subunit A
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65470 : chromatin assembly factor-1 (FASCIATA1) (FAS1)
RAP-DB (Rice) LOC_Os01g67100.1 : expressed protein
MaizeGDB (Corn) Zm00025a039454 , Zm00025a026449 , Zm00025a032491
Brachypodium KQJ98322 , KQJ98321
Barley HORVU5Hr1G084610.1 , HORVU5Hr1G021430.3 , HORVU5Hr1G021430.2 , HORVU5Hr1G021430.1
Wheat TraesCS5B02G335500 , TraesCS5B02G335500 , TraesCS5A02G336500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G214000 expressed protein K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
2 Sobic.003G041700 DNA mismatch repair protein MSH6-2, putative, expressed K08737: DNA mismatch repair protein MSH6
3 Sobic.006G029300 expressed protein K15505: DNA repair protein RAD5
4 Sobic.001G075400 expressed protein -
5 Sobic.010G067900 ORC1 - Putative origin recognition complex subunit 1, expressed K02603: origin recognition complex subunit 1
6 Sobic.008G129200 MCM7 - Putative minichromosome maintenance MCM complex subunit 7, expressed K02210: MCM7, DNA replication licensing factor MCM7
7 Sobic.004G077100 Mad3/BUB1 homology region 1 domain containing protein, expressed K02178: checkpoint serine/threonine-protein kinase
8 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4
9 Sobic.001G131300 centromere protein, putative, expressed -
10 Sobic.001G029800 expressed protein -
11 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
12 Sobic.004G271500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
13 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
14 Sobic.001G177900 Kinesin motor domain domain containing protein, expressed K10400: kinesin family member 15
15 Sobic.001G451800 atypical receptor-like kinase MARK, putative, expressed -
16 Sobic.008G147500 cyclin, putative, expressed K18811: cyclin D5, plant
17 Sobic.001G416000 kinesin-related protein, putative, expressed K10398: KIF11, kinesin family member 11
18 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
19 Sobic.007G168900 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
20 Sobic.003G314900 flap endonuclease, putative, expressed K10746: exonuclease 1


Gene co-expression network
sample Sobic003G387600 Sobic003G387600 Sobic006G214000 Sobic006G214000 Sobic003G387600--Sobic006G214000 Sobic003G041700 Sobic003G041700 Sobic003G387600--Sobic003G041700 Sobic006G029300 Sobic006G029300 Sobic003G387600--Sobic006G029300 Sobic001G075400 Sobic001G075400 Sobic003G387600--Sobic001G075400 Sobic010G067900 Sobic010G067900 Sobic003G387600--Sobic010G067900 Sobic008G129200 Sobic008G129200 Sobic003G387600--Sobic008G129200 Sobic004G077100 Sobic004G077100 Sobic003G387600--Sobic004G077100 Sobic010G147700 Sobic010G147700 Sobic003G387600--Sobic010G147700 Sobic001G131300 Sobic001G131300 Sobic003G387600--Sobic001G131300 Sobic001G177900 Sobic001G177900 Sobic006G214000--Sobic001G177900 Sobic006G214000--Sobic006G029300 Sobic006G214000--Sobic010G147700 Sobic007G168900 Sobic007G168900 Sobic006G214000--Sobic007G168900 Sobic001G540900 Sobic001G540900 Sobic006G214000--Sobic001G540900 Sobic006G214000--Sobic001G075400 Sobic003G294500 Sobic003G294500 Sobic006G214000--Sobic003G294500 Sobic006G214000--Sobic003G387600 Sobic003G314900 Sobic003G314900 Sobic006G214000--Sobic003G314900 Sobic003G041700--Sobic004G077100 Sobic003G041700--Sobic003G387600 Sobic001G403200 Sobic001G403200 Sobic003G041700--Sobic001G403200 Sobic003G041700--Sobic006G214000 Sobic003G041700--Sobic001G075400 Sobic008G113800 Sobic008G113800 Sobic003G041700--Sobic008G113800 Sobic010G104400 Sobic010G104400 Sobic003G041700--Sobic010G104400 Sobic003G273800 Sobic003G273800 Sobic003G041700--Sobic003G273800 Sobic003G041700--Sobic001G131300 Sobic006G029300--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic006G029300--Sobic009G087000 Sobic006G029300--Sobic007G168900 Sobic003G369200 Sobic003G369200 Sobic006G029300--Sobic003G369200 Sobic006G029300--Sobic003G294500 Sobic003G201000 Sobic003G201000 Sobic006G029300--Sobic003G201000 Sobic001G029800 Sobic001G029800 Sobic006G029300--Sobic001G029800 Sobic005G144600 Sobic005G144600 Sobic006G029300--Sobic005G144600 Sobic005G110535 Sobic005G110535 Sobic006G029300--Sobic005G110535 Sobic003G328500 Sobic003G328500 Sobic001G075400--Sobic003G328500 Sobic001G075400--Sobic004G077100 Sobic001G075400--Sobic001G177900 Sobic006G134200 Sobic006G134200 Sobic001G075400--Sobic006G134200 Sobic009G233500 Sobic009G233500 Sobic001G075400--Sobic009G233500 Sobic007G207700 Sobic007G207700 Sobic001G075400--Sobic007G207700 Sobic002G313000 Sobic002G313000 Sobic001G075400--Sobic002G313000 Sobic005G016300 Sobic005G016300 Sobic001G075400--Sobic005G016300 Sobic001G075400--Sobic001G131300 Sobic002G191000 Sobic002G191000 Sobic010G067900--Sobic002G191000 Sobic008G147500 Sobic008G147500 Sobic010G067900--Sobic008G147500 Sobic010G067900--Sobic010G147700 Sobic010G067900--Sobic001G029800 Sobic003G118100 Sobic003G118100 Sobic010G067900--Sobic003G118100 Sobic010G067900--Sobic006G029300 Sobic010G067900--Sobic009G087000 Sobic004G271500 Sobic004G271500 Sobic010G067900--Sobic004G271500 Sobic010G103700 Sobic010G103700 Sobic010G067900--Sobic010G103700 Sobic004G331600 Sobic004G331600 Sobic008G129200--Sobic004G331600 Sobic008G129200--Sobic009G087000 Sobic008G129200--Sobic005G110535 Sobic001G456500 Sobic001G456500 Sobic008G129200--Sobic001G456500 Sobic008G129200--Sobic010G147700 Sobic003G183700 Sobic003G183700 Sobic008G129200--Sobic003G183700 Sobic001G083300 Sobic001G083300 Sobic008G129200--Sobic001G083300 Sobic010G054600 Sobic010G054600 Sobic008G129200--Sobic010G054600 Sobic006G116500 Sobic006G116500 Sobic008G129200--Sobic006G116500 Sobic004G077100--Sobic001G075400 Sobic004G077100--Sobic009G233500 Sobic006G069500 Sobic006G069500 Sobic004G077100--Sobic006G069500 Sobic004G180400 Sobic004G180400 Sobic004G077100--Sobic004G180400 Sobic004G077100--Sobic003G041700 Sobic004G077100--Sobic005G016300 Sobic004G077100--Sobic003G273800 Sobic004G077100--Sobic010G104400 Sobic004G077100--Sobic006G214000 Sobic010G147700--Sobic006G029300 Sobic010G147700--Sobic009G087000 Sobic010G147700--Sobic005G110535 Sobic010G147700--Sobic003G369200 Sobic010G147700--Sobic007G168900 Sobic010G147700--Sobic008G129200 Sobic010G147700--Sobic005G144600 Sobic010G147700--Sobic003G183700 Sobic010G147700--Sobic003G201000 Sobic006G035600 Sobic006G035600 Sobic001G131300--Sobic006G035600 Sobic001G131300--Sobic001G177900 Sobic005G000500 Sobic005G000500 Sobic001G131300--Sobic005G000500 Sobic001G131300--Sobic003G118100 Sobic010G008900 Sobic010G008900 Sobic001G131300--Sobic010G008900 Sobic001G131300--Sobic007G168900 Sobic006G179200 Sobic006G179200 Sobic001G131300--Sobic006G179200 Sobic001G131300--Sobic005G144600 Sobic001G131300--Sobic003G314900
Octagon: transcription factors


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