Gene annotation
Transcriptome id Sobic.002G046700.1
Synonym Sb02g003960
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
versicolorin reductase, putative, expressed
UniProt A0A1W0W2A2
Pfam PF08659
Panther DB PTHR24322 PTHR24322:SF555
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology K00059; fabG, 3-oxoacyl-[acyl-carrier protein] reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G13180 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os07g37420.1 : versicolorin reductase, putative, expressed
MaizeGDB (Corn) Zm00025a045107
Brachypodium KQK20790 , KQK20706
Barley HORVU1Hr1G083910.1
Wheat TraesCS4D02G320300 , TraesCS1B02G401400 , TraesCS3B02G546100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G176100 expressed protein -
2 Sobic.010G171400 expressed protein -
3 Sobic.002G334500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
4 Sobic.004G307700 cyclin-dependent kinase inhibitor, putative, expressed -
5 Sobic.003G260800 expressed protein -
6 Sobic.007G022200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
7 Sobic.002G199100 peptidyl-prolyl cis-trans isomerase, putative, expressed K09579: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
8 Sobic.009G153200 U-box domain containing protein, expressed -
9 Sobic.003G008300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
10 Sobic.005G184100 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.005G052000 serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
12 Sobic.010G136900 white-brown complex homolog protein 11, putative, expressed -
13 Sobic.001G201800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
14 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
15 Sobic.005G182701 - -
16 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
17 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
18 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
19 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
20 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase


Gene co-expression network
sample Sobic002G046700 Sobic002G046700 Sobic006G176100 Sobic006G176100 Sobic002G046700--Sobic006G176100 Sobic010G171400 Sobic010G171400 Sobic002G046700--Sobic010G171400 Sobic002G334500 Sobic002G334500 Sobic002G046700--Sobic002G334500 Sobic004G307700 Sobic004G307700 Sobic002G046700--Sobic004G307700 Sobic003G260800 Sobic003G260800 Sobic002G046700--Sobic003G260800 Sobic007G022200 Sobic007G022200 Sobic002G046700--Sobic007G022200 Sobic002G199100 Sobic002G199100 Sobic002G046700--Sobic002G199100 Sobic009G153200 Sobic009G153200 Sobic002G046700--Sobic009G153200 Sobic003G008300 Sobic003G008300 Sobic002G046700--Sobic003G008300 Sobic005G184100 Sobic005G184100 Sobic006G176100--Sobic005G184100 Sobic006G176100--Sobic002G046700 Sobic002G283800 Sobic002G283800 Sobic006G176100--Sobic002G283800 Sobic001G516800 Sobic001G516800 Sobic006G176100--Sobic001G516800 Sobic010G136900 Sobic010G136900 Sobic006G176100--Sobic010G136900 Sobic001G161300 Sobic001G161300 Sobic006G176100--Sobic001G161300 Sobic006G176100--Sobic002G334500 Sobic004G033900 Sobic004G033900 Sobic006G176100--Sobic004G033900 Sobic006G176100--Sobic010G171400 Sobic010G171400--Sobic002G334500 Sobic010G171400--Sobic002G046700 Sobic009G075100 Sobic009G075100 Sobic010G171400--Sobic009G075100 Sobic009G069901 Sobic009G069901 Sobic010G171400--Sobic009G069901 Sobic002G298400 Sobic002G298400 Sobic010G171400--Sobic002G298400 Sobic004G143801 Sobic004G143801 Sobic010G171400--Sobic004G143801 Sobic007G168000 Sobic007G168000 Sobic010G171400--Sobic007G168000 Sobic002G087500 Sobic002G087500 Sobic010G171400--Sobic002G087500 Sobic009G070800 Sobic009G070800 Sobic010G171400--Sobic009G070800 Sobic009G115400 Sobic009G115400 Sobic002G334500--Sobic009G115400 Sobic009G115300 Sobic009G115300 Sobic002G334500--Sobic009G115300 Sobic006G007650 Sobic006G007650 Sobic002G334500--Sobic006G007650 Sobic002G108400 Sobic002G108400 Sobic002G334500--Sobic002G108400 Sobic002G202700 Sobic002G202700 Sobic002G334500--Sobic002G202700 Sobic006G005500 Sobic006G005500 Sobic002G334500--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic002G334500--Sobic001G125700 Sobic001G201800 Sobic001G201800 Sobic002G334500--Sobic001G201800 Sobic007G076000 Sobic007G076000 Sobic002G334500--Sobic007G076000 Sobic001G020500 Sobic001G020500 Sobic004G307700--Sobic001G020500 Sobic004G307700--Sobic002G046700 Sobic006G122900 Sobic006G122900 Sobic004G307700--Sobic006G122900 Sobic004G307700--Sobic010G136900 Sobic002G293900 Sobic002G293900 Sobic004G307700--Sobic002G293900 Sobic007G124000 Sobic007G124000 Sobic004G307700--Sobic007G124000 Sobic008G147101 Sobic008G147101 Sobic004G307700--Sobic008G147101 Sobic010G108500 Sobic010G108500 Sobic004G307700--Sobic010G108500 Sobic004G307700--Sobic004G033900 Sobic003G260800--Sobic002G046700 Sobic010G210800 Sobic010G210800 Sobic003G260800--Sobic010G210800 Sobic009G241500 Sobic009G241500 Sobic003G260800--Sobic009G241500 Sobic006G045000 Sobic006G045000 Sobic003G260800--Sobic006G045000 Sobic008G181801 Sobic008G181801 Sobic003G260800--Sobic008G181801 Sobic008G085350 Sobic008G085350 Sobic003G260800--Sobic008G085350 Sobic005G133166 Sobic005G133166 Sobic003G260800--Sobic005G133166 Sobic004G209500 Sobic004G209500 Sobic003G260800--Sobic004G209500 Sobic003G248901 Sobic003G248901 Sobic003G260800--Sobic003G248901 Sobic007G022200--Sobic009G153200 Sobic007G022200--Sobic002G199100 Sobic007G022200--Sobic002G046700 Sobic005G052000 Sobic005G052000 Sobic007G022200--Sobic005G052000 Sobic002G001800 Sobic002G001800 Sobic007G022200--Sobic002G001800 Sobic004G063200 Sobic004G063200 Sobic007G022200--Sobic004G063200 Sobic001G310800 Sobic001G310800 Sobic007G022200--Sobic001G310800 Sobic007G022200--Sobic010G171400 Sobic007G022200--Sobic004G033900 Sobic007G106400 Sobic007G106400 Sobic002G199100--Sobic007G106400 Sobic002G199100--Sobic007G022200 Sobic002G199100--Sobic010G171400 Sobic002G199100--Sobic002G046700 Sobic001G172800 Sobic001G172800 Sobic002G199100--Sobic001G172800 Sobic002G273100 Sobic002G273100 Sobic002G199100--Sobic002G273100 Sobic007G046400 Sobic007G046400 Sobic002G199100--Sobic007G046400 Sobic002G199100--Sobic004G307700 Sobic006G241900 Sobic006G241900 Sobic002G199100--Sobic006G241900 Sobic009G153200--Sobic001G201800 Sobic001G198700 Sobic001G198700 Sobic009G153200--Sobic001G198700 Sobic009G233900 Sobic009G233900 Sobic009G153200--Sobic009G233900 Sobic004G078600 Sobic004G078600 Sobic009G153200--Sobic004G078600 Sobic002G041800 Sobic002G041800 Sobic009G153200--Sobic002G041800 Sobic001G019300 Sobic001G019300 Sobic009G153200--Sobic001G019300 Sobic009G038200 Sobic009G038200 Sobic009G153200--Sobic009G038200 Sobic001G520100 Sobic001G520100 Sobic009G153200--Sobic001G520100 Sobic001G449800 Sobic001G449800 Sobic009G153200--Sobic001G449800 Sobic001G513100 Sobic001G513100 Sobic003G008300--Sobic001G513100 Sobic002G058600 Sobic002G058600 Sobic003G008300--Sobic002G058600 Sobic002G366700 Sobic002G366700 Sobic003G008300--Sobic002G366700 Sobic003G118900 Sobic003G118900 Sobic003G008300--Sobic003G118900 Sobic002G349300 Sobic002G349300 Sobic003G008300--Sobic002G349300 Sobic003G008300--Sobic002G046700 Sobic002G339400 Sobic002G339400 Sobic003G008300--Sobic002G339400 Sobic010G099600 Sobic010G099600 Sobic003G008300--Sobic010G099600 Sobic007G038900 Sobic007G038900 Sobic003G008300--Sobic007G038900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.