Gene annotation
Transcriptome id Sobic.003G260800.1
Synonym Sb03g031490
Functional annotation expressed protein
UniProt A0A1B6Q5E6
Pfam PF14009
Panther DB PTHR33052 PTHR33052:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03280 : -
RAP-DB (Rice) LOC_Os05g47960.1 : expressed protein
MaizeGDB (Corn) Zm00025a027993
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G046700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@versicolorin reductase, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
2 Sobic.010G210800 cytokinin-O-glucosyltransferase 2, putative, expressed -
3 Sobic.009G241500 expressed protein -
4 Sobic.006G045000 drought-induced protein 1, putative, expressed -
5 Sobic.008G181801 - -
6 Sobic.008G085350 - -
7 Sobic.005G133166 - -
8 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G248901 - -
10 Sobic.005G226100 ZOS11-10 - C2H2 zinc finger protein, expressed -
11 Sobic.K044407 - -
12 Sobic.001G296300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
13 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
14 Sobic.009G216050 - -
15 Sobic.006G246200 protein kinase, putative, expressed -
16 Sobic.002G349400 - -
17 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
18 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
19 Sobic.004G220600 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
20 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3


Gene co-expression network
sample Sobic003G260800 Sobic003G260800 Sobic002G046700 Sobic002G046700 Sobic003G260800--Sobic002G046700 Sobic010G210800 Sobic010G210800 Sobic003G260800--Sobic010G210800 Sobic009G241500 Sobic009G241500 Sobic003G260800--Sobic009G241500 Sobic006G045000 Sobic006G045000 Sobic003G260800--Sobic006G045000 Sobic008G181801 Sobic008G181801 Sobic003G260800--Sobic008G181801 Sobic008G085350 Sobic008G085350 Sobic003G260800--Sobic008G085350 Sobic005G133166 Sobic005G133166 Sobic003G260800--Sobic005G133166 Sobic004G209500 Sobic004G209500 Sobic003G260800--Sobic004G209500 Sobic003G248901 Sobic003G248901 Sobic003G260800--Sobic003G248901 Sobic006G176100 Sobic006G176100 Sobic002G046700--Sobic006G176100 Sobic010G171400 Sobic010G171400 Sobic002G046700--Sobic010G171400 Sobic002G334500 Sobic002G334500 Sobic002G046700--Sobic002G334500 Sobic004G307700 Sobic004G307700 Sobic002G046700--Sobic004G307700 Sobic002G046700--Sobic003G260800 Sobic007G022200 Sobic007G022200 Sobic002G046700--Sobic007G022200 Sobic002G199100 Sobic002G199100 Sobic002G046700--Sobic002G199100 Sobic009G153200 Sobic009G153200 Sobic002G046700--Sobic009G153200 Sobic003G008300 Sobic003G008300 Sobic002G046700--Sobic003G008300 Sobic002G173900 Sobic002G173900 Sobic010G210800--Sobic002G173900 Sobic005G085500 Sobic005G085500 Sobic010G210800--Sobic005G085500 Sobic002G041800 Sobic002G041800 Sobic010G210800--Sobic002G041800 Sobic001G296300 Sobic001G296300 Sobic010G210800--Sobic001G296300 Sobic003G310200 Sobic003G310200 Sobic010G210800--Sobic003G310200 Sobic010G210800--Sobic008G181801 Sobic007G089300 Sobic007G089300 Sobic010G210800--Sobic007G089300 Sobic001G363200 Sobic001G363200 Sobic010G210800--Sobic001G363200 SobicK044407 SobicK044407 Sobic010G210800--SobicK044407 Sobic009G241500--Sobic008G181801 Sobic005G082700 Sobic005G082700 Sobic009G241500--Sobic005G082700 Sobic005G226100 Sobic005G226100 Sobic009G241500--Sobic005G226100 Sobic006G246200 Sobic006G246200 Sobic009G241500--Sobic006G246200 Sobic001G259500 Sobic001G259500 Sobic009G241500--Sobic001G259500 Sobic006G045000--SobicK044407 Sobic001G012000 Sobic001G012000 Sobic006G045000--Sobic001G012000 Sobic001G056400 Sobic001G056400 Sobic006G045000--Sobic001G056400 Sobic006G045000--Sobic008G181801 Sobic002G423600 Sobic002G423600 Sobic006G045000--Sobic002G423600 Sobic003G378301 Sobic003G378301 Sobic006G045000--Sobic003G378301 Sobic005G182701 Sobic005G182701 Sobic006G045000--Sobic005G182701 Sobic001G201800 Sobic001G201800 Sobic006G045000--Sobic001G201800 Sobic004G217700 Sobic004G217700 Sobic006G045000--Sobic004G217700 Sobic008G181801--SobicK044407 Sobic008G181801--Sobic009G241500 Sobic008G181801--Sobic001G012000 Sobic008G181801--Sobic006G045000 Sobic008G181801--Sobic005G226100 Sobic008G181801--Sobic005G085500 Sobic008G181801--Sobic003G310200 Sobic008G181801--Sobic005G082700 Sobic003G037100 Sobic003G037100 Sobic008G181801--Sobic003G037100 Sobic008G085350--SobicK044407 Sobic008G085350--Sobic003G378301 Sobic008G085350--Sobic006G045000 Sobic008G085350--Sobic001G012000 Sobic008G085350--Sobic001G056400 Sobic008G085350--Sobic005G133166 Sobic008G085350--Sobic008G181801 Sobic008G085350--Sobic002G423600 Sobic001G233200 Sobic001G233200 Sobic008G085350--Sobic001G233200 Sobic005G133166--Sobic005G082700 Sobic005G133166--SobicK044407 Sobic005G133166--Sobic008G181801 Sobic005G133166--Sobic001G012000 Sobic010G210700 Sobic010G210700 Sobic005G133166--Sobic010G210700 Sobic005G133166--Sobic002G173900 Sobic005G133166--Sobic005G085500 Sobic005G133166--Sobic006G045000 Sobic006G168000 Sobic006G168000 Sobic005G133166--Sobic006G168000 Sobic009G216050 Sobic009G216050 Sobic004G209500--Sobic009G216050 Sobic004G209500--Sobic006G045000 Sobic010G214200 Sobic010G214200 Sobic004G209500--Sobic010G214200 Sobic003G310500 Sobic003G310500 Sobic004G209500--Sobic003G310500 Sobic004G209500--Sobic005G085500 Sobic009G233900 Sobic009G233900 Sobic004G209500--Sobic009G233900 Sobic002G216500 Sobic002G216500 Sobic004G209500--Sobic002G216500 Sobic002G209100 Sobic002G209100 Sobic004G209500--Sobic002G209100 Sobic004G209500--Sobic004G217700 Sobic003G248901--Sobic006G045000 Sobic003G248901--Sobic010G214200 Sobic003G248901--SobicK044407 Sobic003G248901--Sobic001G012000 Sobic003G248901--Sobic003G378301 Sobic003G248901--Sobic001G056400 Sobic003G248901--Sobic003G310200 Sobic006G123400 Sobic006G123400 Sobic003G248901--Sobic006G123400 Sobic001G320700 Sobic001G320700 Sobic003G248901--Sobic001G320700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.