Gene annotation
Transcriptome id Sobic.001G296300.1
Synonym Sb01g028930,ethylene response factor 5, ERF5, ATERF5, ATERF-5, SbERF5
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt A0A1Z5S8A1
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF9
NCBI CDD -
KEGG Orthology K09286; EREBP-like factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G47230 : ethylene responsive element binding factor 5
RAP-DB (Rice) LOC_Os10g41330.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005317 , Zm00025a032190 , Zm00025a043851 , Zm00025a035951 , Zm00025a003372 , Zm00025a044109 , Zm00025a010335 , Zm00025a037299 , Zm00025a010338 , Zm00025a005425 , Zm00025a037862 , Zm00025a020894
Brachypodium KQK00588
Barley HORVU6Hr1G062430.1 , HORVU1Hr1G055710.1 , HORVU1Hr1G055710.3 , HORVU5Hr1G068450.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G296300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G210600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
2 Sobic.010G210800 cytokinin-O-glucosyltransferase 2, putative, expressed -
3 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
4 Sobic.006G113400 heavy metal associated domain containing protein, expressed -
5 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
6 Sobic.009G044600 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed K05933: aminocyclopropanecarboxylate oxidase
7 Sobic.010G163150 - -
8 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
9 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
10 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
11 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
12 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
13 Sobic.001G020500 lectin protein kinase family protein, putative, expressed -
14 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
15 Sobic.006G246200 protein kinase, putative, expressed -
16 Sobic.002G169200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK51 - OsWAK receptor-like protein kinase, expressed -
17 Sobic.003G260800 expressed protein -
18 Sobic.010G018300 expressed protein -
19 Sobic.004G160300 expressed protein -
20 Sobic.001G363200 expressed protein -


Gene co-expression network
sample Sobic001G296300 Sobic001G296300 Sobic010G210600 Sobic010G210600 Sobic001G296300--Sobic010G210600 Sobic010G210800 Sobic010G210800 Sobic001G296300--Sobic010G210800 Sobic002G386200 Sobic002G386200 Sobic001G296300--Sobic002G386200 Sobic006G113400 Sobic006G113400 Sobic001G296300--Sobic006G113400 Sobic004G181200 Sobic004G181200 Sobic001G296300--Sobic004G181200 Sobic009G044600 Sobic009G044600 Sobic001G296300--Sobic009G044600 Sobic010G163150 Sobic010G163150 Sobic001G296300--Sobic010G163150 Sobic001G259500 Sobic001G259500 Sobic001G296300--Sobic001G259500 Sobic010G210600--Sobic010G163150 Sobic010G210600--Sobic001G296300 Sobic010G018300 Sobic010G018300 Sobic010G210600--Sobic010G018300 Sobic003G193800 Sobic003G193800 Sobic010G210600--Sobic003G193800 Sobic006G167800 Sobic006G167800 Sobic010G210600--Sobic006G167800 Sobic009G067400 Sobic009G067400 Sobic010G210600--Sobic009G067400 Sobic009G121600 Sobic009G121600 Sobic010G210600--Sobic009G121600 Sobic006G190000 Sobic006G190000 Sobic010G210600--Sobic006G190000 Sobic010G210600--Sobic002G386200 Sobic002G173900 Sobic002G173900 Sobic010G210800--Sobic002G173900 Sobic005G085500 Sobic005G085500 Sobic010G210800--Sobic005G085500 Sobic002G041800 Sobic002G041800 Sobic010G210800--Sobic002G041800 Sobic010G210800--Sobic001G296300 Sobic003G310200 Sobic003G310200 Sobic010G210800--Sobic003G310200 Sobic008G181801 Sobic008G181801 Sobic010G210800--Sobic008G181801 Sobic007G089300 Sobic007G089300 Sobic010G210800--Sobic007G089300 Sobic001G363200 Sobic001G363200 Sobic010G210800--Sobic001G363200 SobicK044407 SobicK044407 Sobic010G210800--SobicK044407 Sobic002G386200--Sobic010G018300 Sobic001G146400 Sobic001G146400 Sobic002G386200--Sobic001G146400 Sobic002G386200--Sobic004G181200 Sobic001G146500 Sobic001G146500 Sobic002G386200--Sobic001G146500 Sobic002G174300 Sobic002G174300 Sobic002G386200--Sobic002G174300 Sobic006G246200 Sobic006G246200 Sobic002G386200--Sobic006G246200 Sobic002G386200--Sobic006G113400 Sobic002G241250 Sobic002G241250 Sobic002G386200--Sobic002G241250 Sobic001G381300 Sobic001G381300 Sobic002G386200--Sobic001G381300 Sobic006G113400--Sobic004G181200 Sobic006G113400--Sobic001G259500 Sobic008G183300 Sobic008G183300 Sobic006G113400--Sobic008G183300 Sobic006G113400--Sobic006G246200 Sobic002G169200 Sobic002G169200 Sobic006G113400--Sobic002G169200 Sobic004G181200--Sobic006G113400 Sobic004G181200--Sobic001G363200 Sobic004G160300 Sobic004G160300 Sobic004G181200--Sobic004G160300 Sobic004G181200--Sobic001G259500 Sobic004G181200--Sobic006G246200 Sobic006G231600 Sobic006G231600 Sobic009G044600--Sobic006G231600 Sobic009G044600--Sobic010G210600 Sobic010G097900 Sobic010G097900 Sobic009G044600--Sobic010G097900 Sobic009G044600--Sobic002G386200 Sobic010G273600 Sobic010G273600 Sobic009G044600--Sobic010G273600 Sobic005G171100 Sobic005G171100 Sobic009G044600--Sobic005G171100 Sobic009G044600--Sobic001G296300 Sobic003G291700 Sobic003G291700 Sobic009G044600--Sobic003G291700 Sobic006G113900 Sobic006G113900 Sobic009G044600--Sobic006G113900 Sobic010G163150--Sobic001G146400 Sobic010G163150--Sobic002G386200 Sobic010G163150--Sobic010G018300 Sobic010G163150--Sobic009G067400 Sobic004G297600 Sobic004G297600 Sobic010G163150--Sobic004G297600 Sobic009G214300 Sobic009G214300 Sobic010G163150--Sobic009G214300 Sobic010G163150--Sobic010G210600 Sobic004G181300 Sobic004G181300 Sobic010G163150--Sobic004G181300 Sobic003G258700 Sobic003G258700 Sobic010G163150--Sobic003G258700 Sobic001G259500--Sobic001G259500 Sobic009G241500 Sobic009G241500 Sobic001G259500--Sobic009G241500 Sobic002G269032 Sobic002G269032 Sobic001G259500--Sobic002G269032 Sobic004G052500 Sobic004G052500 Sobic001G259500--Sobic004G052500 Sobic001G259500--Sobic001G146500 Sobic003G138100 Sobic003G138100 Sobic001G259500--Sobic003G138100
Octagon: transcription factors


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