Gene annotation
Transcriptome id Sobic.009G044600.1
Synonym Sb09g003800
Functional annotation 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed
UniProt O81606
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF189
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology K05933; aminocyclopropanecarboxylate oxidase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G77330 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os05g05680.1 : 1-aminocyclopropane-1-carboxylate oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a033063 , Zm00025a055410 , Zm00025a055408 , Zm00025a055407 , Zm00025a055405 , Zm00025a038390 , Zm00025a034057 , Zm00025a034056 , Zm00025a047223 , Zm00025a012763
Brachypodium KQK07503 , KQK07502
Barley HORVU7Hr1G028710.2 , HORVU7Hr1G028710.1 , HORVU5Hr1G067530.1 , HORVU5Hr1G067530.2 , HORVU5Hr1G067530.4 , HORVU1Hr1G020410.2 , HORVU1Hr1G020410.3 , HORVU1Hr1G020410.1 , HORVU1Hr1G020450.2 , HORVU1Hr1G020450.1 , HORVU5Hr1G067490.4 , HORVU5Hr1G067490.3 , HORVU5Hr1G067490.2 , HORVU5Hr1G067490.1 , HORVU1Hr1G020430.1 , HORVU4Hr1G017660.2 , HORVU4Hr1G017660.3 , HORVU4Hr1G017660.1 , HORVU6Hr1G079640.3 , HORVU6Hr1G079640.1 , HORVU6Hr1G079640.6 , HORVU6Hr1G079640.7 , HORVU6Hr1G079640.4 , HORVU6Hr1G079640.5
Wheat TraesCS6A02G325600 , TraesCS6D02G305400 , TraesCS6A02G325400 , TraesCS6A02G325700 , TraesCS6B02G355700 , TraesCS4D02G095500 , TraesCS5A02G234300 , TraesCSU02G067700 , TraesCS6B02G355900 , TraesCS4A02G221300 , TraesCS5B02G232700 , TraesCS6B02G356000 , TraesCS6D02G305100 , TraesCS6D02G305100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G231600 acetyltransferase, GNAT family, putative, expressed -
2 Sobic.010G210600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
3 Sobic.010G097900 expressed protein -
4 Sobic.002G386200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
5 Sobic.010G273600 CHIT8 - Chitinase family protein precursor, expressed K01183: chitinase
6 Sobic.005G171100 - -
7 Sobic.001G296300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
9 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
10 Sobic.001G018400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G376200 expressed protein -
12 Sobic.002G209100 glutamate receptor, putative, expressed -
13 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
14 Sobic.006G246200 protein kinase, putative, expressed -
15 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
16 Sobic.008G146700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"beta-1,3-glucanase "(PubMedID : 25311645)@glycosyl hydrolases family 17, putative, expressed -
17 Sobic.008G183300 thaumatin, putative, expressed -
18 Sobic.001G146500 OsSAUR17 - Auxin-responsive SAUR gene family member, expressed -
19 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
20 Sobic.002G220300 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein


Gene co-expression network
sample Sobic009G044600 Sobic009G044600 Sobic006G231600 Sobic006G231600 Sobic009G044600--Sobic006G231600 Sobic010G210600 Sobic010G210600 Sobic009G044600--Sobic010G210600 Sobic010G097900 Sobic010G097900 Sobic009G044600--Sobic010G097900 Sobic002G386200 Sobic002G386200 Sobic009G044600--Sobic002G386200 Sobic010G273600 Sobic010G273600 Sobic009G044600--Sobic010G273600 Sobic005G171100 Sobic005G171100 Sobic009G044600--Sobic005G171100 Sobic001G296300 Sobic001G296300 Sobic009G044600--Sobic001G296300 Sobic003G291700 Sobic003G291700 Sobic009G044600--Sobic003G291700 Sobic006G113900 Sobic006G113900 Sobic009G044600--Sobic006G113900 Sobic006G231600--Sobic005G171100 Sobic006G231600--Sobic003G291700 Sobic006G246200 Sobic006G246200 Sobic006G231600--Sobic006G246200 Sobic001G136300 Sobic001G136300 Sobic006G231600--Sobic001G136300 Sobic001G319100 Sobic001G319100 Sobic006G231600--Sobic001G319100 Sobic001G146500 Sobic001G146500 Sobic006G231600--Sobic001G146500 Sobic002G209100 Sobic002G209100 Sobic006G231600--Sobic002G209100 Sobic010G155300 Sobic010G155300 Sobic006G231600--Sobic010G155300 Sobic005G082700 Sobic005G082700 Sobic006G231600--Sobic005G082700 Sobic010G163150 Sobic010G163150 Sobic010G210600--Sobic010G163150 Sobic010G210600--Sobic001G296300 Sobic010G018300 Sobic010G018300 Sobic010G210600--Sobic010G018300 Sobic003G193800 Sobic003G193800 Sobic010G210600--Sobic003G193800 Sobic006G167800 Sobic006G167800 Sobic010G210600--Sobic006G167800 Sobic009G067400 Sobic009G067400 Sobic010G210600--Sobic009G067400 Sobic009G121600 Sobic009G121600 Sobic010G210600--Sobic009G121600 Sobic006G190000 Sobic006G190000 Sobic010G210600--Sobic006G190000 Sobic010G210600--Sobic002G386200 Sobic001G146400 Sobic001G146400 Sobic010G097900--Sobic001G146400 Sobic004G169900 Sobic004G169900 Sobic010G097900--Sobic004G169900 Sobic010G097900--Sobic010G018300 Sobic010G097900--Sobic002G386200 Sobic010G097900--Sobic001G146500 Sobic004G052500 Sobic004G052500 Sobic010G097900--Sobic004G052500 Sobic003G138400 Sobic003G138400 Sobic010G097900--Sobic003G138400 Sobic010G097900--Sobic010G273600 Sobic006G168000 Sobic006G168000 Sobic010G097900--Sobic006G168000 Sobic002G386200--Sobic010G018300 Sobic002G386200--Sobic001G146400 Sobic004G181200 Sobic004G181200 Sobic002G386200--Sobic004G181200 Sobic002G386200--Sobic001G146500 Sobic002G174300 Sobic002G174300 Sobic002G386200--Sobic002G174300 Sobic002G386200--Sobic006G246200 Sobic006G113400 Sobic006G113400 Sobic002G386200--Sobic006G113400 Sobic002G241250 Sobic002G241250 Sobic002G386200--Sobic002G241250 Sobic001G381300 Sobic001G381300 Sobic002G386200--Sobic001G381300 Sobic010G273600--Sobic004G052500 Sobic002G425300 Sobic002G425300 Sobic010G273600--Sobic002G425300 Sobic008G183300 Sobic008G183300 Sobic010G273600--Sobic008G183300 Sobic001G259500 Sobic001G259500 Sobic010G273600--Sobic001G259500 Sobic010G273600--Sobic001G146500 Sobic008G146700 Sobic008G146700 Sobic005G171100--Sobic008G146700 Sobic010G045000 Sobic010G045000 Sobic005G171100--Sobic010G045000 Sobic005G171100--Sobic003G291700 Sobic005G171100--Sobic006G246200 Sobic005G171100--Sobic006G231600 Sobic005G171100--Sobic002G209100 Sobic005G171100--Sobic005G082700 Sobic005G171100--Sobic006G113900 Sobic005G171100--Sobic001G136300 Sobic001G296300--Sobic010G210600 Sobic010G210800 Sobic010G210800 Sobic001G296300--Sobic010G210800 Sobic001G296300--Sobic002G386200 Sobic001G296300--Sobic006G113400 Sobic001G296300--Sobic004G181200 Sobic001G296300--Sobic009G044600 Sobic001G296300--Sobic010G163150 Sobic001G296300--Sobic001G259500 Sobic003G291700--Sobic010G045000 Sobic008G060300 Sobic008G060300 Sobic003G291700--Sobic008G060300 Sobic003G291700--Sobic006G113900 Sobic003G291700--Sobic005G082700 Sobic003G291700--Sobic001G381300 Sobic005G193600 Sobic005G193600 Sobic003G291700--Sobic005G193600 Sobic003G258700 Sobic003G258700 Sobic003G291700--Sobic003G258700 Sobic006G229500 Sobic006G229500 Sobic003G291700--Sobic006G229500 Sobic003G376200 Sobic003G376200 Sobic003G291700--Sobic003G376200 Sobic006G113900--Sobic001G136300 Sobic006G113900--Sobic006G246200 Sobic006G113900--Sobic001G146500 Sobic006G113900--Sobic008G183300 Sobic006G113900--Sobic003G291700 Sobic006G113900--Sobic005G082700 Sobic006G113900--Sobic006G168000 Sobic009G241500 Sobic009G241500 Sobic006G113900--Sobic009G241500 Sobic006G003700 Sobic006G003700 Sobic006G113900--Sobic006G003700
Octagon: transcription factors


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