Gene annotation
Transcriptome id Sobic.002G220300.1
Synonym Sb02g026150, HAT14
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5X256
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF209
NCBI CDD -
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT5G06710 : homeobox from Arabidopsis thaliana
RAP-DB (Rice) LOC_Os09g27450.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a001412 , Zm00025a005382 , Zm00025a003364 , Zm00025a010325 , Zm00025a017100 , Zm00025a052979 , Zm00025a047209 , Zm00025a014052 , Zm00025a050084 , Zm00025a050086 , Zm00025a031666
Brachypodium KQJ90458 , KQJ83922 , PNT76669 , KQK19923 , KQJ98582 , KQJ97808 , KQK22747
Barley HORVU5Hr1G067010.13 , HORVU5Hr1G067010.12 , HORVU5Hr1G067010.11 , HORVU5Hr1G067010.10 , HORVU5Hr1G067010.15 , HORVU5Hr1G067010.14 , HORVU4Hr1G065900.7 , HORVU1Hr1G055930.1 , HORVU1Hr1G055930.3 , HORVU1Hr1G055930.2 , HORVU1Hr1G055930.5 , HORVU4Hr1G065900.4 , HORVU1Hr1G055930.6 , HORVU2Hr1G097940.5 , HORVU2Hr1G097940.4 , HORVU2Hr1G097940.7 , HORVU2Hr1G097940.6 , HORVU2Hr1G097940.1 , HORVU2Hr1G097940.3 , HORVU2Hr1G097940.2 , HORVU2Hr1G097940.9 , HORVU2Hr1G097940.8 , HORVU1Hr1G055930.4 , HORVU5Hr1G067010.9 , HORVU5Hr1G067010.3 , HORVU5Hr1G067010.2 , HORVU5Hr1G067010.1 , HORVU5Hr1G067010.7 , HORVU5Hr1G067010.6 , HORVU5Hr1G067010.4 , HORVU5Hr1G049790.1 , HORVU5Hr1G049790.2 , HORVU2Hr1G097940.11 , HORVU2Hr1G097940.10 , HORVU4Hr1G065900.6 , HORVU4Hr1G065900.3 , HORVU4Hr1G065900.1 , HORVU1Hr1G082910.3 , HORVU1Hr1G082910.2 , HORVU4Hr1G065900.5 , HORVU4Hr1G065900.8 , HORVU4Hr1G065900.9 , HORVU7Hr1G098230.2 , HORVU7Hr1G098230.1 , HORVU4Hr1G065900.10
Wheat TraesCS1D02G379700 , TraesCS7D02G078900 , TraesCS7A02G423800 , TraesCS7D02G417700 , TraesCS1B02G232700 , TraesCS1D02G220900 , TraesCS2B02G434900 , TraesCS4A02G059600 , TraesCS7B02G326300 , TraesCS7D02G078800 , TraesCS4A02G382200 , TraesCS4A02G382400 , TraesCS4D02G236600 , TraesCS7A02G084000 , TraesCS1B02G232700 , TraesCS5D02G235300 , TraesCS1A02G372900 , TraesCS4B02G235300 , TraesCS4B02G235300 , TraesCS2D02G412900 , TraesCS2A02G415900 , TraesCS1B02G393100 , TraesCS5A02G232700 , TraesCS1A02G219200 , TraesCS7D02G079000 , TraesCS5B02G231300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G291700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase 5 precursor, putative, expressed -
2 Sobic.003G258700 expressed protein -
3 Sobic.004G160300 expressed protein -
4 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
5 Sobic.008G060300 transcription factor(PubMedID : 30367619)@WRKY45, expressed -
6 Sobic.001G363200 expressed protein -
7 Sobic.009G227800 membrane attack complex component/perforin/complement C9, putative, expressed -
8 Sobic.004G187300 zinc finger protein, putative, expressed -
9 Sobic.003G376200 expressed protein -
10 Sobic.002G209100 glutamate receptor, putative, expressed -
11 Sobic.007G014600 transferase family protein, putative, expressed -
12 Sobic.003G256000 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
13 Sobic.010G273600 CHIT8 - Chitinase family protein precursor, expressed K01183: chitinase
14 Sobic.002G425300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
15 Sobic.007G071000 no apical meristem protein, putative, expressed -
16 Sobic.003G242800 down-regulated TF in developmental senescence(PubMedID : 27586543)@WRKY15, expressed -
17 Sobic.010G120800 Leucine-rich repeat receptor-like serine/threonine/tyrosine protein kinase(PubMedID : 31721651)@protein kinase domain containing protein, expressed -
18 Sobic.007G054100 stress-induced protein, putative, expressed -
19 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
20 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic002G220300 Sobic002G220300 Sobic003G291700 Sobic003G291700 Sobic002G220300--Sobic003G291700 Sobic003G258700 Sobic003G258700 Sobic002G220300--Sobic003G258700 Sobic004G160300 Sobic004G160300 Sobic002G220300--Sobic004G160300 Sobic001G030500 Sobic001G030500 Sobic002G220300--Sobic001G030500 Sobic008G060300 Sobic008G060300 Sobic002G220300--Sobic008G060300 Sobic001G363200 Sobic001G363200 Sobic002G220300--Sobic001G363200 Sobic009G227800 Sobic009G227800 Sobic002G220300--Sobic009G227800 Sobic004G187300 Sobic004G187300 Sobic002G220300--Sobic004G187300 Sobic003G376200 Sobic003G376200 Sobic002G220300--Sobic003G376200 Sobic010G045000 Sobic010G045000 Sobic003G291700--Sobic010G045000 Sobic003G291700--Sobic008G060300 Sobic006G113900 Sobic006G113900 Sobic003G291700--Sobic006G113900 Sobic005G082700 Sobic005G082700 Sobic003G291700--Sobic005G082700 Sobic001G381300 Sobic001G381300 Sobic003G291700--Sobic001G381300 Sobic005G193600 Sobic005G193600 Sobic003G291700--Sobic005G193600 Sobic003G291700--Sobic003G258700 Sobic006G229500 Sobic006G229500 Sobic003G291700--Sobic006G229500 Sobic003G291700--Sobic003G376200 Sobic003G258700--Sobic004G160300 Sobic002G202800 Sobic002G202800 Sobic003G258700--Sobic002G202800 Sobic003G258700--Sobic001G363200 Sobic005G165900 Sobic005G165900 Sobic003G258700--Sobic005G165900 Sobic004G181200 Sobic004G181200 Sobic003G258700--Sobic004G181200 Sobic003G258700--Sobic003G291700 Sobic003G242800 Sobic003G242800 Sobic003G258700--Sobic003G242800 Sobic002G386200 Sobic002G386200 Sobic003G258700--Sobic002G386200 Sobic003G037100 Sobic003G037100 Sobic003G258700--Sobic003G037100 Sobic004G160300--Sobic001G363200 Sobic004G160300--Sobic003G258700 Sobic004G160300--Sobic004G181200 Sobic004G160300--Sobic003G037100 Sobic002G174300 Sobic002G174300 Sobic004G160300--Sobic002G174300 Sobic002G241250 Sobic002G241250 Sobic004G160300--Sobic002G241250 Sobic004G160300--Sobic002G386200 Sobic006G113400 Sobic006G113400 Sobic004G160300--Sobic006G113400 Sobic001G146500 Sobic001G146500 Sobic004G160300--Sobic001G146500 Sobic003G255100 Sobic003G255100 Sobic001G030500--Sobic003G255100 Sobic007G014600 Sobic007G014600 Sobic001G030500--Sobic007G014600 Sobic010G079700 Sobic010G079700 Sobic001G030500--Sobic010G079700 Sobic001G179100 Sobic001G179100 Sobic001G030500--Sobic001G179100 Sobic007G191900 Sobic007G191900 Sobic001G030500--Sobic007G191900 Sobic001G005500 Sobic001G005500 Sobic001G030500--Sobic001G005500 Sobic006G269400 Sobic006G269400 Sobic001G030500--Sobic006G269400 Sobic001G121100 Sobic001G121100 Sobic001G030500--Sobic001G121100 Sobic002G271600 Sobic002G271600 Sobic001G030500--Sobic002G271600 Sobic006G060800 Sobic006G060800 Sobic008G060300--Sobic006G060800 Sobic009G252100 Sobic009G252100 Sobic008G060300--Sobic009G252100 Sobic008G060300--Sobic005G193600 Sobic001G201800 Sobic001G201800 Sobic008G060300--Sobic001G201800 Sobic002G202700 Sobic002G202700 Sobic008G060300--Sobic002G202700 Sobic007G129201 Sobic007G129201 Sobic008G060300--Sobic007G129201 Sobic005G193500 Sobic005G193500 Sobic008G060300--Sobic005G193500 Sobic004G195800 Sobic004G195800 Sobic008G060300--Sobic004G195800 Sobic003G366100 Sobic003G366100 Sobic008G060300--Sobic003G366100 Sobic001G363200--Sobic004G160300 Sobic001G363200--Sobic004G181200 Sobic002G354400 Sobic002G354400 Sobic001G363200--Sobic002G354400 Sobic001G363200--Sobic003G258700 Sobic001G363200--Sobic002G202800 Sobic002G173900 Sobic002G173900 Sobic001G363200--Sobic002G173900 Sobic002G064200 Sobic002G064200 Sobic001G363200--Sobic002G064200 Sobic001G363200--Sobic003G037100 Sobic003G256000 Sobic003G256000 Sobic001G363200--Sobic003G256000 Sobic010G273700 Sobic010G273700 Sobic009G227800--Sobic010G273700 Sobic003G109832 Sobic003G109832 Sobic009G227800--Sobic003G109832 Sobic001G314300 Sobic001G314300 Sobic009G227800--Sobic001G314300 Sobic003G138400 Sobic003G138400 Sobic009G227800--Sobic003G138400 Sobic004G092000 Sobic004G092000 Sobic009G227800--Sobic004G092000 Sobic009G227800--Sobic003G376200 Sobic004G006500 Sobic004G006500 Sobic009G227800--Sobic004G006500 Sobic002G195800 Sobic002G195800 Sobic009G227800--Sobic002G195800 Sobic001G339600 Sobic001G339600 Sobic009G227800--Sobic001G339600 Sobic004G187300--Sobic004G195800 Sobic003G153800 Sobic003G153800 Sobic004G187300--Sobic003G153800 SobicK044407 SobicK044407 Sobic004G187300--SobicK044407 Sobic001G410450 Sobic001G410450 Sobic004G187300--Sobic001G410450 Sobic001G012000 Sobic001G012000 Sobic004G187300--Sobic001G012000 Sobic008G181801 Sobic008G181801 Sobic004G187300--Sobic008G181801 SobicK020500 SobicK020500 Sobic004G187300--SobicK020500 Sobic002G209100 Sobic002G209100 Sobic004G187300--Sobic002G209100 Sobic009G205600 Sobic009G205600 Sobic004G187300--Sobic009G205600 Sobic004G220600 Sobic004G220600 Sobic003G376200--Sobic004G220600 Sobic002G216500 Sobic002G216500 Sobic003G376200--Sobic002G216500 Sobic003G376200--Sobic004G092000 Sobic003G376200--Sobic003G291700 Sobic005G218500 Sobic005G218500 Sobic003G376200--Sobic005G218500 Sobic003G376200--Sobic002G209100 Sobic003G376200--Sobic010G273700 Sobic003G376200--Sobic008G060300 Sobic003G376200--Sobic002G195800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.