Gene annotation
Transcriptome id Sobic.001G020500.1
Synonym Sb01g001980
Functional annotation lectin protein kinase family protein, putative, expressed
UniProt A0A1Z5S3X9
Pfam PF08276 PF00954 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF52
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G34300 : lectin protein kinase family protein
RAP-DB (Rice) LOC_Os03g62180.2 : lectin protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a039466 , Zm00025a043477 , Zm00025a008958 , Zm00025a050067 , Zm00025a023535 , Zm00025a003599 , Zm00025a035949
Brachypodium KQK12244 , KQK02593 , KQJ93941
Barley HORVU5Hr1G118510.7 , HORVU5Hr1G118510.6 , HORVU5Hr1G118510.5 , HORVU5Hr1G118510.4 , HORVU5Hr1G118510.3 , HORVU5Hr1G118510.2 , HORVU5Hr1G118510.1 , HORVU2Hr1G106300.1 , HORVU3Hr1G090220.1 , HORVU3Hr1G090220.2 , HORVU3Hr1G090220.3 , HORVU3Hr1G090220.4 , HORVU3Hr1G090220.5 , HORVU2Hr1G020630.1 , HORVU2Hr1G020630.2 , HORVU5Hr1G118460.1
Wheat TraesCS3D02G049700 , TraesCS7A02G385300 , TraesCS7A02G385300 , TraesCS3D02G397000 , TraesCS3D02G397000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G307700 cyclin-dependent kinase inhibitor, putative, expressed -
2 Sobic.006G195200 purine permease, putative, expressed -
3 Sobic.001G296300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.003G118900 disease resistance protein RGA2, putative, expressed -
5 Sobic.004G334100 expressed protein -
6 Sobic.005G052000 serine/threonine-protein kinase BRI1-like 1 precursor, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
7 Sobic.005G098200 TKL_IRAK_CR4L.7 - The CR4L subfamily has homology with Crinkly4, expressed -
8 Sobic.006G087200 GLTP domain containing protein, putative, expressed -
9 Sobic.010G108500 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
10 Sobic.008G147101 - -
11 Sobic.010G170600 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
12 Sobic.010G027800 Brix domain containing protein, putative, expressed K14846: ribosome production factor 1
13 Sobic.004G310700 glutaredoxin 2, putative, expressed -
14 Sobic.009G145900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PB1 domain containing protein, expressed -
15 Sobic.009G088401 - -
16 Sobic.003G001550 - -
17 Sobic.004G033900 expressed protein -
18 Sobic.004G320300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.002G293900 mitochondrial glycoprotein, putative, expressed -
20 Sobic.002G283800 AIG2-like family domain containing protein, expressed -


Gene co-expression network
sample Sobic001G020500 Sobic001G020500 Sobic004G307700 Sobic004G307700 Sobic001G020500--Sobic004G307700 Sobic006G195200 Sobic006G195200 Sobic001G020500--Sobic006G195200 Sobic001G296300 Sobic001G296300 Sobic001G020500--Sobic001G296300 Sobic003G118900 Sobic003G118900 Sobic001G020500--Sobic003G118900 Sobic004G334100 Sobic004G334100 Sobic001G020500--Sobic004G334100 Sobic005G052000 Sobic005G052000 Sobic001G020500--Sobic005G052000 Sobic005G098200 Sobic005G098200 Sobic001G020500--Sobic005G098200 Sobic006G087200 Sobic006G087200 Sobic001G020500--Sobic006G087200 Sobic010G108500 Sobic010G108500 Sobic001G020500--Sobic010G108500 Sobic004G307700--Sobic001G020500 Sobic002G046700 Sobic002G046700 Sobic004G307700--Sobic002G046700 Sobic006G122900 Sobic006G122900 Sobic004G307700--Sobic006G122900 Sobic010G136900 Sobic010G136900 Sobic004G307700--Sobic010G136900 Sobic002G293900 Sobic002G293900 Sobic004G307700--Sobic002G293900 Sobic007G124000 Sobic007G124000 Sobic004G307700--Sobic007G124000 Sobic008G147101 Sobic008G147101 Sobic004G307700--Sobic008G147101 Sobic004G307700--Sobic010G108500 Sobic004G033900 Sobic004G033900 Sobic004G307700--Sobic004G033900 Sobic007G131900 Sobic007G131900 Sobic006G195200--Sobic007G131900 Sobic004G320300 Sobic004G320300 Sobic006G195200--Sobic004G320300 Sobic002G092700 Sobic002G092700 Sobic006G195200--Sobic002G092700 Sobic001G396300 Sobic001G396300 Sobic006G195200--Sobic001G396300 Sobic006G065700 Sobic006G065700 Sobic006G195200--Sobic006G065700 Sobic009G198400 Sobic009G198400 Sobic006G195200--Sobic009G198400 Sobic010G170600 Sobic010G170600 Sobic006G195200--Sobic010G170600 Sobic001G213400 Sobic001G213400 Sobic006G195200--Sobic001G213400 Sobic002G387100 Sobic002G387100 Sobic006G195200--Sobic002G387100 Sobic010G210600 Sobic010G210600 Sobic001G296300--Sobic010G210600 Sobic010G210800 Sobic010G210800 Sobic001G296300--Sobic010G210800 Sobic002G386200 Sobic002G386200 Sobic001G296300--Sobic002G386200 Sobic006G113400 Sobic006G113400 Sobic001G296300--Sobic006G113400 Sobic004G181200 Sobic004G181200 Sobic001G296300--Sobic004G181200 Sobic009G044600 Sobic009G044600 Sobic001G296300--Sobic009G044600 Sobic010G163150 Sobic010G163150 Sobic001G296300--Sobic010G163150 Sobic001G259500 Sobic001G259500 Sobic001G296300--Sobic001G259500 Sobic003G008300 Sobic003G008300 Sobic003G118900--Sobic003G008300 Sobic007G131800 Sobic007G131800 Sobic003G118900--Sobic007G131800 Sobic001G513100 Sobic001G513100 Sobic003G118900--Sobic001G513100 Sobic006G166700 Sobic006G166700 Sobic003G118900--Sobic006G166700 Sobic010G087200 Sobic010G087200 Sobic003G118900--Sobic010G087200 Sobic003G118900--Sobic001G020500 Sobic002G001300 Sobic002G001300 Sobic003G118900--Sobic002G001300 Sobic002G366700 Sobic002G366700 Sobic003G118900--Sobic002G366700 Sobic002G339400 Sobic002G339400 Sobic003G118900--Sobic002G339400 Sobic002G311400 Sobic002G311400 Sobic004G334100--Sobic002G311400 Sobic009G155500 Sobic009G155500 Sobic004G334100--Sobic009G155500 Sobic004G334100--Sobic006G195200 Sobic010G258100 Sobic010G258100 Sobic004G334100--Sobic010G258100 Sobic004G334100--Sobic001G020500 Sobic002G056300 Sobic002G056300 Sobic004G334100--Sobic002G056300 Sobic004G334100--Sobic010G170600 Sobic004G334100--Sobic004G320300 Sobic001G429100 Sobic001G429100 Sobic004G334100--Sobic001G429100 Sobic005G052000--Sobic004G033900 Sobic001G310800 Sobic001G310800 Sobic005G052000--Sobic001G310800 Sobic001G004500 Sobic001G004500 Sobic005G052000--Sobic001G004500 Sobic007G105800 Sobic007G105800 Sobic005G052000--Sobic007G105800 Sobic004G186600 Sobic004G186600 Sobic005G052000--Sobic004G186600 Sobic009G153200 Sobic009G153200 Sobic005G052000--Sobic009G153200 Sobic002G334500 Sobic002G334500 Sobic005G052000--Sobic002G334500 Sobic010G171400 Sobic010G171400 Sobic005G052000--Sobic010G171400 Sobic010G267000 Sobic010G267000 Sobic005G052000--Sobic010G267000 Sobic003G104900 Sobic003G104900 Sobic005G098200--Sobic003G104900 Sobic001G483700 Sobic001G483700 Sobic005G098200--Sobic001G483700 Sobic005G209800 Sobic005G209800 Sobic005G098200--Sobic005G209800 Sobic005G231800 Sobic005G231800 Sobic005G098200--Sobic005G231800 Sobic008G002100 Sobic008G002100 Sobic005G098200--Sobic008G002100 Sobic003G142900 Sobic003G142900 Sobic005G098200--Sobic003G142900 Sobic008G023000 Sobic008G023000 Sobic005G098200--Sobic008G023000 Sobic004G226300 Sobic004G226300 Sobic005G098200--Sobic004G226300 Sobic001G527400 Sobic001G527400 Sobic005G098200--Sobic001G527400 Sobic003G235300 Sobic003G235300 Sobic006G087200--Sobic003G235300 Sobic007G045800 Sobic007G045800 Sobic006G087200--Sobic007G045800 Sobic006G087200--Sobic001G020500 Sobic004G284400 Sobic004G284400 Sobic006G087200--Sobic004G284400 Sobic003G081400 Sobic003G081400 Sobic006G087200--Sobic003G081400 Sobic004G310700 Sobic004G310700 Sobic006G087200--Sobic004G310700 Sobic005G198300 Sobic005G198300 Sobic006G087200--Sobic005G198300 Sobic008G015000 Sobic008G015000 Sobic006G087200--Sobic008G015000 Sobic001G520700 Sobic001G520700 Sobic006G087200--Sobic001G520700 Sobic006G118000 Sobic006G118000 Sobic010G108500--Sobic006G118000 Sobic010G108500--Sobic004G033900 Sobic010G108500--Sobic001G310800 Sobic002G186600 Sobic002G186600 Sobic010G108500--Sobic002G186600 Sobic010G108500--Sobic008G147101 Sobic002G088200 Sobic002G088200 Sobic010G108500--Sobic002G088200 Sobic010G108500--Sobic004G307700 Sobic001G516800 Sobic001G516800 Sobic010G108500--Sobic001G516800 Sobic009G010700 Sobic009G010700 Sobic010G108500--Sobic009G010700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.