Gene annotation
Transcriptome id Sobic.004G320300.1
Synonym Sb04g035080
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A194YSS4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g54100.1 : expressed protein
MaizeGDB (Corn) Zm00025a042443 , Zm00025a022369
Brachypodium PNT76276
Barley HORVU6Hr1G082310.15 , HORVU6Hr1G082310.16 , HORVU6Hr1G082310.4 , HORVU6Hr1G082310.5
Wheat TraesCS6A02G341600 , TraesCS6A02G341600 , TraesCS6B02G373200 , TraesCS6B02G373200 , TraesCS6D02G321700 , TraesCS6D02G321700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G200500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
2 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
3 Sobic.002G156300 - -
4 Sobic.003G109400 - -
5 Sobic.007G001300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
6 Sobic.010G224800 patellin-5, putative, expressed -
7 Sobic.010G114400 expressed protein -
8 Sobic.003G201400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hsp20/alpha crystallin family protein, putative, expressed -
9 Sobic.002G206200 monogalactosyldiacylglycerol synthase, putative, expressed K03715: 1,2-diacylglycerol 3-beta-galactosyltransferase
10 Sobic.006G172651 - -
11 Sobic.003G081400 Ser/Thr protein kinase, putative, expressed -
12 Sobic.010G114500 tetraspanin family protein, putative, expressed -
13 Sobic.004G197300 - -
14 Sobic.003G105300 - -
15 Sobic.001G261440 - -
16 Sobic.008G133100 OsWAK13 - OsWAK receptor-like protein kinase, expressed -
17 Sobic.009G163500 - -
18 Sobic.002G092700 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.001G145300 - -
20 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic004G320300 Sobic004G320300 Sobic001G200500 Sobic001G200500 Sobic004G320300--Sobic001G200500 Sobic009G031100 Sobic009G031100 Sobic004G320300--Sobic009G031100 Sobic002G156300 Sobic002G156300 Sobic004G320300--Sobic002G156300 Sobic003G109400 Sobic003G109400 Sobic004G320300--Sobic003G109400 Sobic007G001300 Sobic007G001300 Sobic004G320300--Sobic007G001300 Sobic010G224800 Sobic010G224800 Sobic004G320300--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic004G320300--Sobic010G114400 Sobic003G201400 Sobic003G201400 Sobic004G320300--Sobic003G201400 Sobic002G206200 Sobic002G206200 Sobic004G320300--Sobic002G206200 Sobic008G133100 Sobic008G133100 Sobic001G200500--Sobic008G133100 Sobic001G200500--Sobic010G224800 Sobic001G200500--Sobic007G001300 Sobic001G200500--Sobic009G031100 Sobic001G255700 Sobic001G255700 Sobic001G200500--Sobic001G255700 Sobic002G284800 Sobic002G284800 Sobic001G200500--Sobic002G284800 Sobic001G200500--Sobic003G109400 Sobic001G200500--Sobic002G156300 Sobic003G368150 Sobic003G368150 Sobic001G200500--Sobic003G368150 Sobic009G031100--Sobic002G156300 Sobic009G031100--Sobic007G001300 Sobic009G031100--Sobic010G224800 Sobic009G031100--Sobic010G114400 Sobic009G031100--Sobic003G109400 Sobic010G114500 Sobic010G114500 Sobic009G031100--Sobic010G114500 Sobic003G105300 Sobic003G105300 Sobic009G031100--Sobic003G105300 Sobic009G031100--Sobic002G206200 Sobic004G197300 Sobic004G197300 Sobic009G031100--Sobic004G197300 Sobic002G156300--Sobic007G001300 Sobic002G156300--Sobic003G109400 Sobic002G156300--Sobic010G114400 Sobic002G156300--Sobic010G224800 Sobic002G156300--Sobic009G031100 Sobic002G156300--Sobic003G105300 Sobic002G156300--Sobic004G197300 Sobic008G020300 Sobic008G020300 Sobic002G156300--Sobic008G020300 Sobic009G163500 Sobic009G163500 Sobic002G156300--Sobic009G163500 Sobic003G109400--Sobic002G156300 Sobic003G109400--Sobic010G224800 Sobic003G109400--Sobic007G001300 Sobic003G109400--Sobic010G114400 Sobic003G109400--Sobic009G163500 Sobic003G109400--Sobic009G031100 Sobic003G109400--Sobic008G020300 Sobic003G109400--Sobic002G206200 Sobic003G109400--Sobic004G197300 Sobic007G001300--Sobic002G156300 Sobic007G001300--Sobic010G224800 Sobic007G001300--Sobic010G114400 Sobic007G001300--Sobic003G109400 Sobic007G001300--Sobic009G031100 Sobic007G001300--Sobic004G197300 Sobic007G001300--Sobic003G105300 Sobic007G001300--Sobic008G020300 Sobic010G179150 Sobic010G179150 Sobic007G001300--Sobic010G179150 Sobic010G224800--Sobic010G114400 Sobic010G224800--Sobic007G001300 Sobic010G224800--Sobic003G109400 Sobic010G224800--Sobic002G156300 Sobic010G224800--Sobic009G031100 Sobic002G425900 Sobic002G425900 Sobic010G224800--Sobic002G425900 Sobic010G224800--Sobic003G105300 Sobic010G224800--Sobic004G197300 Sobic010G224800--Sobic009G163500 Sobic010G114400--Sobic010G224800 Sobic010G114400--Sobic002G156300 Sobic010G114400--Sobic007G001300 Sobic010G114400--Sobic003G109400 Sobic010G114400--Sobic009G031100 Sobic010G114400--Sobic002G425900 Sobic010G114400--Sobic004G197300 Sobic010G114400--Sobic009G163500 Sobic010G114400--Sobic003G105300 Sobic003G201400--Sobic010G114400 Sobic003G201400--Sobic002G156300 Sobic003G201400--Sobic010G224800 Sobic003G201400--Sobic009G031100 Sobic003G201400--Sobic003G109400 Sobic006G197000 Sobic006G197000 Sobic003G201400--Sobic006G197000 Sobic003G201400--Sobic007G001300 Sobic006G172651 Sobic006G172651 Sobic003G201400--Sobic006G172651 Sobic003G081400 Sobic003G081400 Sobic003G201400--Sobic003G081400 Sobic002G206200--Sobic003G109400 Sobic002G206200--Sobic002G156300 Sobic002G206200--Sobic006G172651 Sobic002G206200--Sobic010G224800 Sobic002G206200--Sobic009G031100 Sobic002G206200--Sobic009G163500 Sobic002G206200--Sobic007G001300 Sobic002G206200--Sobic010G114400 Sobic001G261440 Sobic001G261440 Sobic002G206200--Sobic001G261440
Octagon: transcription factors


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