Gene annotation
Transcriptome id Sobic.002G293900.1
Synonym Sb02g032490
Functional annotation mitochondrial glycoprotein, putative, expressed
UniProt A0A1B6QE26
Pfam PF02330
Panther DB PTHR10826 PTHR10826:SF13
NCBI CDD KOG2536; MAM33, mitochondrial matrix glycoprotein
KEGG Orthology -
Gene Ontology GO:0005759; mitochondrial matrix


Orthologs (automatic annotation)
TAIR AT4G31930 : Mitochondrial glycoprotein family protein
RAP-DB (Rice) LOC_Os09g38500.2 : mitochondrial glycoprotein, putative, expressed
MaizeGDB (Corn) Zm00025a014546
Brachypodium KQJ91431
Barley HORVU5Hr1G088460.1 , HORVU5Hr1G088460.3 , HORVU5Hr1G088460.5 , HORVU5Hr1G088460.4 , HORVU5Hr1G088460.6 , HORVU5Hr1G088460.2
Wheat TraesCS5D02G367500 , TraesCS5D02G367500 , TraesCS5A02G358200 , TraesCS5A02G358200 , TraesCS5B02G360700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G028500 expressed protein -
2 Sobic.002G276700 protein of unknown function containing protein, expressed -
3 Sobic.001G429100 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
4 Sobic.005G232000 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
5 Sobic.K044200 - -
6 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
7 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
8 Sobic.010G114500 tetraspanin family protein, putative, expressed -
9 Sobic.007G013500 expressed protein -
10 Sobic.002G254600 expressed protein -
11 Sobic.006G278500 class I glutamine amidotransferase, putative, expressed K01951: guaA, GMP synthase (glutamine-hydrolysing)
12 Sobic.002G425900 expressed protein -
13 Sobic.006G157300 expressed protein -
14 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
15 Sobic.010G027800 Brix domain containing protein, putative, expressed K14846: ribosome production factor 1
16 Sobic.004G128600 salt stress root protein RS1, putative, expressed -
17 Sobic.002G092700 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.007G106400 endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
19 Sobic.006G212000 PPR repeat domain containing protein, putative, expressed -
20 Sobic.009G191800 single-stranded DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G293900 Sobic002G293900 Sobic008G028500 Sobic008G028500 Sobic002G293900--Sobic008G028500 Sobic002G276700 Sobic002G276700 Sobic002G293900--Sobic002G276700 Sobic001G429100 Sobic001G429100 Sobic002G293900--Sobic001G429100 Sobic005G232000 Sobic005G232000 Sobic002G293900--Sobic005G232000 SobicK044200 SobicK044200 Sobic002G293900--SobicK044200 Sobic010G189800 Sobic010G189800 Sobic002G293900--Sobic010G189800 Sobic009G154000 Sobic009G154000 Sobic002G293900--Sobic009G154000 Sobic010G114500 Sobic010G114500 Sobic002G293900--Sobic010G114500 Sobic007G013500 Sobic007G013500 Sobic002G293900--Sobic007G013500 Sobic002G425900 Sobic002G425900 Sobic008G028500--Sobic002G425900 Sobic008G028500--SobicK044200 Sobic010G224800 Sobic010G224800 Sobic008G028500--Sobic010G224800 Sobic004G330400 Sobic004G330400 Sobic008G028500--Sobic004G330400 Sobic009G031100 Sobic009G031100 Sobic008G028500--Sobic009G031100 Sobic002G284800 Sobic002G284800 Sobic008G028500--Sobic002G284800 Sobic003G109400 Sobic003G109400 Sobic008G028500--Sobic003G109400 Sobic003G368150 Sobic003G368150 Sobic008G028500--Sobic003G368150 Sobic001G255700 Sobic001G255700 Sobic008G028500--Sobic001G255700 Sobic001G441800 Sobic001G441800 Sobic002G276700--Sobic001G441800 Sobic003G350100 Sobic003G350100 Sobic002G276700--Sobic003G350100 Sobic008G133100 Sobic008G133100 Sobic002G276700--Sobic008G133100 Sobic003G067300 Sobic003G067300 Sobic002G276700--Sobic003G067300 Sobic002G387100 Sobic002G387100 Sobic002G276700--Sobic002G387100 Sobic002G276700--Sobic002G284800 Sobic002G430200 Sobic002G430200 Sobic002G276700--Sobic002G430200 Sobic001G193400 Sobic001G193400 Sobic002G276700--Sobic001G193400 Sobic007G122300 Sobic007G122300 Sobic002G276700--Sobic007G122300 Sobic001G429100--Sobic002G276700 Sobic004G192700 Sobic004G192700 Sobic001G429100--Sobic004G192700 Sobic002G056300 Sobic002G056300 Sobic001G429100--Sobic002G056300 Sobic001G429100--Sobic001G441800 Sobic001G429100--Sobic003G350100 Sobic001G200500 Sobic001G200500 Sobic001G429100--Sobic001G200500 Sobic004G227000 Sobic004G227000 Sobic001G429100--Sobic004G227000 Sobic001G429100--Sobic008G133100 Sobic004G265400 Sobic004G265400 Sobic001G429100--Sobic004G265400 Sobic010G258100 Sobic010G258100 Sobic005G232000--Sobic010G258100 Sobic004G082151 Sobic004G082151 Sobic005G232000--Sobic004G082151 Sobic004G013500 Sobic004G013500 Sobic005G232000--Sobic004G013500 Sobic006G065700 Sobic006G065700 Sobic005G232000--Sobic006G065700 Sobic005G232000--Sobic003G067300 Sobic003G067500 Sobic003G067500 Sobic005G232000--Sobic003G067500 Sobic002G210200 Sobic002G210200 Sobic005G232000--Sobic002G210200 Sobic007G221800 Sobic007G221800 Sobic005G232000--Sobic007G221800 Sobic005G232000--Sobic003G350100 SobicK044200--Sobic002G425900 SobicK044200--Sobic009G154000 SobicK044200--Sobic004G330400 SobicK044200--Sobic003G109400 Sobic004G354800 Sobic004G354800 SobicK044200--Sobic004G354800 SobicK044200--Sobic001G255700 Sobic009G163500 Sobic009G163500 SobicK044200--Sobic009G163500 SobicK044200--Sobic002G284800 SobicK044200--Sobic010G224800 Sobic007G081300 Sobic007G081300 Sobic010G189800--Sobic007G081300 Sobic010G189800--Sobic004G192700 Sobic003G092200 Sobic003G092200 Sobic010G189800--Sobic003G092200 Sobic006G187600 Sobic006G187600 Sobic010G189800--Sobic006G187600 Sobic010G073300 Sobic010G073300 Sobic010G189800--Sobic010G073300 Sobic007G149600 Sobic007G149600 Sobic010G189800--Sobic007G149600 Sobic010G189800--Sobic004G227000 Sobic003G301200 Sobic003G301200 Sobic010G189800--Sobic003G301200 Sobic010G189800--Sobic001G441800 Sobic009G154000--SobicK044200 Sobic009G154000--Sobic002G425900 Sobic004G128600 Sobic004G128600 Sobic009G154000--Sobic004G128600 Sobic010G114400 Sobic010G114400 Sobic009G154000--Sobic010G114400 Sobic009G154000--Sobic004G330400 Sobic009G154000--Sobic010G224800 Sobic009G154000--Sobic002G284800 Sobic009G154000--Sobic001G255700 Sobic009G154000--Sobic003G368150 Sobic010G114500--Sobic009G031100 Sobic007G001300 Sobic007G001300 Sobic010G114500--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic010G114500--Sobic002G156300 Sobic010G114500--Sobic003G109400 Sobic010G114500--Sobic010G224800 Sobic010G114500--Sobic010G114400 Sobic003G105300 Sobic003G105300 Sobic010G114500--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic010G114500--Sobic004G197300 Sobic010G114500--Sobic009G163500 Sobic003G179100 Sobic003G179100 Sobic007G013500--Sobic003G179100 Sobic001G115800 Sobic001G115800 Sobic007G013500--Sobic001G115800 Sobic007G013500--Sobic010G073300 Sobic009G255300 Sobic009G255300 Sobic007G013500--Sobic009G255300 Sobic006G278500 Sobic006G278500 Sobic007G013500--Sobic006G278500 Sobic007G013500--Sobic004G192700 Sobic006G139600 Sobic006G139600 Sobic007G013500--Sobic006G139600 Sobic001G519300 Sobic001G519300 Sobic007G013500--Sobic001G519300 Sobic004G275500 Sobic004G275500 Sobic007G013500--Sobic004G275500
Octagon: transcription factors


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