Gene annotation
Transcriptome id Sobic.002G254600.1,Sobic.002G254600.3,Sobic.002G254600.2
Synonym Sb02g028980
Functional annotation expressed protein
UniProt A0A1W0W5P6 , A0A1B6QDG4 , A0A1W0W5W0
Pfam PF12937
Panther DB PTHR32212 PTHR32212:SF122
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G04230 : FBD, F-box and Leucine Rich Repeat domains containing protein
RAP-DB (Rice) LOC_Os09g32580.1 : expressed protein
MaizeGDB (Corn) Zm00025a047538
Brachypodium KQJ90993
Barley -
Wheat TraesCS5D02G282800 , TraesCS2B02G439600 , TraesCS5B02G274700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G056400 expressed protein -
2 Sobic.009G191800 single-stranded DNA-binding protein, putative, expressed -
3 Sobic.004G013500 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
4 Sobic.009G031700 expressed protein -
5 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
6 Sobic.010G114500 tetraspanin family protein, putative, expressed -
7 Sobic.004G188201 - -
8 Sobic.002G276700 protein of unknown function containing protein, expressed -
9 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
10 Sobic.008G028500 expressed protein -
11 Sobic.009G031100 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
12 Sobic.001G429100 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
13 Sobic.007G081300 peptide transporter PTR2, putative, expressed -
14 Sobic.006G162700 - -
15 Sobic.006G247500 terpene synthase, putative, expressed -
16 Sobic.005G232000 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
17 Sobic.010G018800 impaired sucrose induction 1, putative, expressed -
18 Sobic.002G425900 expressed protein -
19 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
20 Sobic.003G092200 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B


Gene co-expression network
sample Sobic002G254600 Sobic002G254600 Sobic003G056400 Sobic003G056400 Sobic002G254600--Sobic003G056400 Sobic009G191800 Sobic009G191800 Sobic002G254600--Sobic009G191800 Sobic004G013500 Sobic004G013500 Sobic002G254600--Sobic004G013500 Sobic009G031700 Sobic009G031700 Sobic002G254600--Sobic009G031700 Sobic010G189800 Sobic010G189800 Sobic002G254600--Sobic010G189800 Sobic010G114500 Sobic010G114500 Sobic002G254600--Sobic010G114500 Sobic004G188201 Sobic004G188201 Sobic002G254600--Sobic004G188201 Sobic002G276700 Sobic002G276700 Sobic002G254600--Sobic002G276700 Sobic001G441800 Sobic001G441800 Sobic002G254600--Sobic001G441800 Sobic003G056400--Sobic009G191800 Sobic003G056400--Sobic009G031700 Sobic003G056400--Sobic004G013500 Sobic003G056400--Sobic002G254600 Sobic003G056400--Sobic010G114500 Sobic006G162700 Sobic006G162700 Sobic003G056400--Sobic006G162700 Sobic003G056400--Sobic004G188201 Sobic006G178700 Sobic006G178700 Sobic003G056400--Sobic006G178700 Sobic009G031100 Sobic009G031100 Sobic003G056400--Sobic009G031100 Sobic009G191800--Sobic001G441800 Sobic009G191800--Sobic004G013500 Sobic001G130900 Sobic001G130900 Sobic009G191800--Sobic001G130900 Sobic007G149600 Sobic007G149600 Sobic009G191800--Sobic007G149600 Sobic009G191800--Sobic010G114500 Sobic003G350100 Sobic003G350100 Sobic009G191800--Sobic003G350100 Sobic007G122300 Sobic007G122300 Sobic009G191800--Sobic007G122300 Sobic009G191800--Sobic002G276700 Sobic004G265400 Sobic004G265400 Sobic009G191800--Sobic004G265400 Sobic004G013500--Sobic009G191800 Sobic004G013500--Sobic009G031700 Sobic004G013500--Sobic004G188201 Sobic004G013500--Sobic003G056400 Sobic004G013500--Sobic010G114500 Sobic004G013500--Sobic002G254600 Sobic004G013500--Sobic001G441800 Sobic004G013500--Sobic003G350100 Sobic001G193400 Sobic001G193400 Sobic004G013500--Sobic001G193400 Sobic009G031700--Sobic004G188201 Sobic009G031700--Sobic004G013500 Sobic009G031700--Sobic010G114500 Sobic009G031700--Sobic006G178700 Sobic009G031700--Sobic003G056400 Sobic010G040000 Sobic010G040000 Sobic009G031700--Sobic010G040000 Sobic009G031700--Sobic009G191800 Sobic010G200800 Sobic010G200800 Sobic009G031700--Sobic010G200800 Sobic009G031700--Sobic009G031100 Sobic007G081300 Sobic007G081300 Sobic010G189800--Sobic007G081300 Sobic004G192700 Sobic004G192700 Sobic010G189800--Sobic004G192700 Sobic003G092200 Sobic003G092200 Sobic010G189800--Sobic003G092200 Sobic006G187600 Sobic006G187600 Sobic010G189800--Sobic006G187600 Sobic010G073300 Sobic010G073300 Sobic010G189800--Sobic010G073300 Sobic010G189800--Sobic007G149600 Sobic004G227000 Sobic004G227000 Sobic010G189800--Sobic004G227000 Sobic003G301200 Sobic003G301200 Sobic010G189800--Sobic003G301200 Sobic010G189800--Sobic001G441800 Sobic010G114500--Sobic009G031100 Sobic007G001300 Sobic007G001300 Sobic010G114500--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic010G114500--Sobic002G156300 Sobic003G109400 Sobic003G109400 Sobic010G114500--Sobic003G109400 Sobic010G224800 Sobic010G224800 Sobic010G114500--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic010G114500--Sobic010G114400 Sobic003G105300 Sobic003G105300 Sobic010G114500--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic010G114500--Sobic004G197300 Sobic009G163500 Sobic009G163500 Sobic010G114500--Sobic009G163500 Sobic004G188201--Sobic009G031700 Sobic004G188201--Sobic004G013500 Sobic004G188201--Sobic003G056400 Sobic001G536200 Sobic001G536200 Sobic004G188201--Sobic001G536200 Sobic010G096500 Sobic010G096500 Sobic004G188201--Sobic010G096500 Sobic004G188201--Sobic006G178700 Sobic006G218100 Sobic006G218100 Sobic004G188201--Sobic006G218100 Sobic003G270700 Sobic003G270700 Sobic004G188201--Sobic003G270700 Sobic010G266100 Sobic010G266100 Sobic004G188201--Sobic010G266100 Sobic002G276700--Sobic001G441800 Sobic002G276700--Sobic003G350100 Sobic008G133100 Sobic008G133100 Sobic002G276700--Sobic008G133100 Sobic003G067300 Sobic003G067300 Sobic002G276700--Sobic003G067300 Sobic002G387100 Sobic002G387100 Sobic002G276700--Sobic002G387100 Sobic002G284800 Sobic002G284800 Sobic002G276700--Sobic002G284800 Sobic002G430200 Sobic002G430200 Sobic002G276700--Sobic002G430200 Sobic002G276700--Sobic001G193400 Sobic002G276700--Sobic007G122300 Sobic003G368150 Sobic003G368150 Sobic001G441800--Sobic003G368150 Sobic001G441800--Sobic002G387100 Sobic001G441800--Sobic007G122300 Sobic001G441800--Sobic002G284800 Sobic001G441800--Sobic002G430200 Sobic001G441800--Sobic008G133100 Sobic004G239000 Sobic004G239000 Sobic001G441800--Sobic004G239000 Sobic003G099500 Sobic003G099500 Sobic001G441800--Sobic003G099500 Sobic001G255700 Sobic001G255700 Sobic001G441800--Sobic001G255700
Octagon: transcription factors


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