Gene annotation
Transcriptome id Sobic.004G013500.1
Synonym UDPGP, Sb04g001320, AtUGP2, UGP2
Functional annotation UDP-glucose Pyrophosphorylase (PubMedID : 26616172)
UTP--glucose-1-phosphate uridylyltransferase, putative, expressed
UniProt C5XSC5
Pfam PF01704
Panther DB PTHR11952:SF13 PTHR11952
NCBI CDD -
KEGG Orthology K00963; UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
Gene Ontology GO:0008152; metabolic process


Orthologs (automatic annotation)
TAIR AT5G17310 : UDP-glucose pyrophosphorylase 2
RAP-DB (Rice) LOC_Os02g02560.1 : UTP--glucose-1-phosphate uridylyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a026084 , Zm00025a047948 , Zm00025a024587 , Zm00025a038094 , Zm00025a045237 , Zm00025a018722 , Zm00025a014529
Brachypodium KQJ91387 , KQJ92922 , KQJ92923
Barley HORVU2Hr1G049570.4 , HORVU2Hr1G049570.3 , HORVU2Hr1G049570.2 , HORVU2Hr1G049570.1
Wheat TraesCSU02G109000 , TraesCS6A02G050100
Populus -


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cDNA sequences
Sobic.004G013500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G191800 single-stranded DNA-binding protein, putative, expressed -
2 Sobic.009G031700 expressed protein -
3 Sobic.004G188201 - -
4 Sobic.003G056400 expressed protein -
5 Sobic.010G114500 tetraspanin family protein, putative, expressed -
6 Sobic.002G254600 expressed protein -
7 Sobic.001G441800 hydroxyproline-rich glycoprotein family protein, putative, expressed -
8 Sobic.003G350100 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
9 Sobic.001G193400 DUF538 domain containing protein, putative, expressed -
10 Sobic.002G210200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
11 Sobic.003G067300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
12 Sobic.003G200501 - K11252: histone H2B
13 Sobic.003G067500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
14 Sobic.005G232000 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
15 Sobic.004G265400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
16 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
17 Sobic.001G525000 polygalacturonase, putative, expressed -
18 Sobic.002G430200 PSF2 - Putative GINS complex subunit, expressed K10733: GINS2, GINS complex subunit 2
19 Sobic.003G367401 - -
20 Sobic.007G149600 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B


Gene co-expression network
sample Sobic004G013500 Sobic004G013500 Sobic009G191800 Sobic009G191800 Sobic004G013500--Sobic009G191800 Sobic009G031700 Sobic009G031700 Sobic004G013500--Sobic009G031700 Sobic004G188201 Sobic004G188201 Sobic004G013500--Sobic004G188201 Sobic003G056400 Sobic003G056400 Sobic004G013500--Sobic003G056400 Sobic010G114500 Sobic010G114500 Sobic004G013500--Sobic010G114500 Sobic002G254600 Sobic002G254600 Sobic004G013500--Sobic002G254600 Sobic001G441800 Sobic001G441800 Sobic004G013500--Sobic001G441800 Sobic003G350100 Sobic003G350100 Sobic004G013500--Sobic003G350100 Sobic001G193400 Sobic001G193400 Sobic004G013500--Sobic001G193400 Sobic009G191800--Sobic001G441800 Sobic009G191800--Sobic004G013500 Sobic001G130900 Sobic001G130900 Sobic009G191800--Sobic001G130900 Sobic007G149600 Sobic007G149600 Sobic009G191800--Sobic007G149600 Sobic009G191800--Sobic010G114500 Sobic009G191800--Sobic003G350100 Sobic007G122300 Sobic007G122300 Sobic009G191800--Sobic007G122300 Sobic002G276700 Sobic002G276700 Sobic009G191800--Sobic002G276700 Sobic004G265400 Sobic004G265400 Sobic009G191800--Sobic004G265400 Sobic009G031700--Sobic004G188201 Sobic009G031700--Sobic004G013500 Sobic009G031700--Sobic010G114500 Sobic006G178700 Sobic006G178700 Sobic009G031700--Sobic006G178700 Sobic009G031700--Sobic003G056400 Sobic010G040000 Sobic010G040000 Sobic009G031700--Sobic010G040000 Sobic009G031700--Sobic009G191800 Sobic010G200800 Sobic010G200800 Sobic009G031700--Sobic010G200800 Sobic009G031100 Sobic009G031100 Sobic009G031700--Sobic009G031100 Sobic004G188201--Sobic009G031700 Sobic004G188201--Sobic004G013500 Sobic004G188201--Sobic003G056400 Sobic001G536200 Sobic001G536200 Sobic004G188201--Sobic001G536200 Sobic010G096500 Sobic010G096500 Sobic004G188201--Sobic010G096500 Sobic004G188201--Sobic006G178700 Sobic006G218100 Sobic006G218100 Sobic004G188201--Sobic006G218100 Sobic003G270700 Sobic003G270700 Sobic004G188201--Sobic003G270700 Sobic010G266100 Sobic010G266100 Sobic004G188201--Sobic010G266100 Sobic003G056400--Sobic009G191800 Sobic003G056400--Sobic009G031700 Sobic003G056400--Sobic004G013500 Sobic003G056400--Sobic002G254600 Sobic003G056400--Sobic010G114500 Sobic006G162700 Sobic006G162700 Sobic003G056400--Sobic006G162700 Sobic003G056400--Sobic004G188201 Sobic003G056400--Sobic006G178700 Sobic003G056400--Sobic009G031100 Sobic010G114500--Sobic009G031100 Sobic007G001300 Sobic007G001300 Sobic010G114500--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic010G114500--Sobic002G156300 Sobic003G109400 Sobic003G109400 Sobic010G114500--Sobic003G109400 Sobic010G224800 Sobic010G224800 Sobic010G114500--Sobic010G224800 Sobic010G114400 Sobic010G114400 Sobic010G114500--Sobic010G114400 Sobic003G105300 Sobic003G105300 Sobic010G114500--Sobic003G105300 Sobic004G197300 Sobic004G197300 Sobic010G114500--Sobic004G197300 Sobic009G163500 Sobic009G163500 Sobic010G114500--Sobic009G163500 Sobic002G254600--Sobic003G056400 Sobic002G254600--Sobic009G191800 Sobic002G254600--Sobic004G013500 Sobic002G254600--Sobic009G031700 Sobic010G189800 Sobic010G189800 Sobic002G254600--Sobic010G189800 Sobic002G254600--Sobic010G114500 Sobic002G254600--Sobic004G188201 Sobic002G254600--Sobic002G276700 Sobic002G254600--Sobic001G441800 Sobic003G368150 Sobic003G368150 Sobic001G441800--Sobic003G368150 Sobic002G387100 Sobic002G387100 Sobic001G441800--Sobic002G387100 Sobic001G441800--Sobic007G122300 Sobic002G284800 Sobic002G284800 Sobic001G441800--Sobic002G284800 Sobic002G430200 Sobic002G430200 Sobic001G441800--Sobic002G430200 Sobic008G133100 Sobic008G133100 Sobic001G441800--Sobic008G133100 Sobic004G239000 Sobic004G239000 Sobic001G441800--Sobic004G239000 Sobic003G099500 Sobic003G099500 Sobic001G441800--Sobic003G099500 Sobic001G255700 Sobic001G255700 Sobic001G441800--Sobic001G255700 Sobic003G067300 Sobic003G067300 Sobic003G350100--Sobic003G067300 Sobic003G350100--Sobic004G265400 Sobic003G350100--Sobic007G149600 Sobic003G350100--Sobic001G193400 Sobic003G067500 Sobic003G067500 Sobic003G350100--Sobic003G067500 Sobic003G200501 Sobic003G200501 Sobic003G350100--Sobic003G200501 Sobic002G210200 Sobic002G210200 Sobic003G350100--Sobic002G210200 Sobic003G350100--Sobic002G387100 Sobic003G350100--Sobic008G133100 Sobic001G193400--Sobic003G350100 Sobic001G193400--Sobic003G067300 Sobic001G193400--Sobic004G265400 Sobic001G193400--Sobic007G149600 Sobic001G193400--Sobic003G200501 Sobic001G193400--Sobic003G067500 Sobic001G193400--Sobic002G210200 Sobic001G193400--Sobic002G387100 Sobic001G193400--Sobic002G430200
Octagon: transcription factors


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