Gene annotation
Transcriptome id Sobic.003G118900.1
Synonym
Functional annotation disease resistance protein RGA2, putative, expressed
UniProt A0A1B6Q2Q1
Pfam PF13855 PF00931
Panther DB PTHR23155 PTHR23155:SF648
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os01g15580.1 : disease resistance protein RGA2, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU6Hr1G020670.8 , HORVU6Hr1G020670.1 , HORVU6Hr1G020670.3 , HORVU6Hr1G020670.2 , HORVU6Hr1G020670.5 , HORVU6Hr1G020670.4 , HORVU6Hr1G020670.7 , HORVU6Hr1G020670.6
Wheat TraesCS6B02G142600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G008300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
2 Sobic.007G131800 Annexin D5(PubMedID : 26320239)@annexin, putative, expressed K17095: annexin A7/11
3 Sobic.001G513100 LYR motif containing protein, putative, expressed -
4 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.010G087200 expressed protein -
6 Sobic.001G020500 lectin protein kinase family protein, putative, expressed -
7 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
8 Sobic.002G366700 expressed protein -
9 Sobic.002G339400 expressed protein -
10 Sobic.007G133600 cytochrome P450 72A1, putative, expressed K10717: cytokinin trans-hydroxylase
11 Sobic.009G235300 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K01247: DNA-3-methyladenine glycosylase II
12 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
13 Sobic.010G099600 expressed protein -
14 Sobic.001G005000 receptor protein kinase, putative, expressed -
15 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.010G014300 expressed protein -
17 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
18 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.005G198300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G144300 acetyltransferase, GNAT family, putative, expressed -


Gene co-expression network
sample Sobic003G118900 Sobic003G118900 Sobic003G008300 Sobic003G008300 Sobic003G118900--Sobic003G008300 Sobic007G131800 Sobic007G131800 Sobic003G118900--Sobic007G131800 Sobic001G513100 Sobic001G513100 Sobic003G118900--Sobic001G513100 Sobic006G166700 Sobic006G166700 Sobic003G118900--Sobic006G166700 Sobic010G087200 Sobic010G087200 Sobic003G118900--Sobic010G087200 Sobic001G020500 Sobic001G020500 Sobic003G118900--Sobic001G020500 Sobic002G001300 Sobic002G001300 Sobic003G118900--Sobic002G001300 Sobic002G366700 Sobic002G366700 Sobic003G118900--Sobic002G366700 Sobic002G339400 Sobic002G339400 Sobic003G118900--Sobic002G339400 Sobic003G008300--Sobic001G513100 Sobic002G058600 Sobic002G058600 Sobic003G008300--Sobic002G058600 Sobic003G008300--Sobic002G366700 Sobic003G008300--Sobic003G118900 Sobic002G349300 Sobic002G349300 Sobic003G008300--Sobic002G349300 Sobic002G046700 Sobic002G046700 Sobic003G008300--Sobic002G046700 Sobic003G008300--Sobic002G339400 Sobic010G099600 Sobic010G099600 Sobic003G008300--Sobic010G099600 Sobic007G038900 Sobic007G038900 Sobic003G008300--Sobic007G038900 Sobic004G335600 Sobic004G335600 Sobic007G131800--Sobic004G335600 Sobic002G245900 Sobic002G245900 Sobic007G131800--Sobic002G245900 Sobic007G133600 Sobic007G133600 Sobic007G131800--Sobic007G133600 Sobic009G008300 Sobic009G008300 Sobic007G131800--Sobic009G008300 Sobic007G131800--Sobic010G099600 Sobic006G157200 Sobic006G157200 Sobic007G131800--Sobic006G157200 Sobic004G042700 Sobic004G042700 Sobic007G131800--Sobic004G042700 Sobic007G131800--Sobic003G118900 Sobic006G206000 Sobic006G206000 Sobic007G131800--Sobic006G206000 Sobic001G513100--Sobic002G366700 Sobic001G513100--Sobic003G008300 Sobic001G513100--Sobic002G058600 Sobic001G513100--Sobic002G339400 Sobic001G494150 Sobic001G494150 Sobic001G513100--Sobic001G494150 Sobic001G513100--Sobic010G087200 Sobic001G428700 Sobic001G428700 Sobic001G513100--Sobic001G428700 Sobic001G513100--Sobic003G118900 Sobic004G180600 Sobic004G180600 Sobic001G513100--Sobic004G180600 Sobic010G014300 Sobic010G014300 Sobic006G166700--Sobic010G014300 Sobic001G005000 Sobic001G005000 Sobic006G166700--Sobic001G005000 Sobic006G166700--Sobic010G087200 Sobic006G166700--Sobic002G001300 Sobic004G288400 Sobic004G288400 Sobic006G166700--Sobic004G288400 Sobic001G239400 Sobic001G239400 Sobic006G166700--Sobic001G239400 Sobic010G259200 Sobic010G259200 Sobic006G166700--Sobic010G259200 Sobic010G194500 Sobic010G194500 Sobic006G166700--Sobic010G194500 Sobic009G076800 Sobic009G076800 Sobic006G166700--Sobic009G076800 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic010G087200--Sobic007G206700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G119600 Sobic010G119600 Sobic010G087200--Sobic010G119600 Sobic010G087200--Sobic002G366700 Sobic004G307700 Sobic004G307700 Sobic001G020500--Sobic004G307700 Sobic006G195200 Sobic006G195200 Sobic001G020500--Sobic006G195200 Sobic001G296300 Sobic001G296300 Sobic001G020500--Sobic001G296300 Sobic001G020500--Sobic003G118900 Sobic004G334100 Sobic004G334100 Sobic001G020500--Sobic004G334100 Sobic005G052000 Sobic005G052000 Sobic001G020500--Sobic005G052000 Sobic005G098200 Sobic005G098200 Sobic001G020500--Sobic005G098200 Sobic006G087200 Sobic006G087200 Sobic001G020500--Sobic006G087200 Sobic010G108500 Sobic010G108500 Sobic001G020500--Sobic010G108500 Sobic002G001300--Sobic010G259200 Sobic002G001300--Sobic007G206700 Sobic003G083700 Sobic003G083700 Sobic002G001300--Sobic003G083700 Sobic002G001300--Sobic010G087200 Sobic002G001300--Sobic010G119600 Sobic001G402701 Sobic001G402701 Sobic002G001300--Sobic001G402701 Sobic002G001300--Sobic001G494150 Sobic003G104900 Sobic003G104900 Sobic002G001300--Sobic003G104900 Sobic002G001300--Sobic006G166700 Sobic002G366700--Sobic001G494150 Sobic002G366700--Sobic002G339400 Sobic002G366700--Sobic010G087200 Sobic006G075700 Sobic006G075700 Sobic002G366700--Sobic006G075700 Sobic002G366700--Sobic002G058600 Sobic002G366700--Sobic001G513100 Sobic002G366700--Sobic010G259200 Sobic002G366700--Sobic010G119600 Sobic002G366700--Sobic001G428700 Sobic002G339400--Sobic002G366700 Sobic002G339400--Sobic001G494150 Sobic002G339400--Sobic010G087200 Sobic002G339400--Sobic001G428700 Sobic002G339400--Sobic004G288400 Sobic002G339400--Sobic010G014300 Sobic002G339400--Sobic006G075700 Sobic002G339400--Sobic006G166700 Sobic002G339400--Sobic010G259200
Octagon: transcription factors


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