Gene annotation
Transcriptome id Sobic.006G241900.1
Synonym Sb06g030790
Functional annotation plant-specific domain TIGR01627 family protein, expressed
UniProt A0A1B6PNF3
Pfam PF04669
Panther DB PTHR31444 PTHR31444:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67210 : Protein of unknown function (DUF579)
RAP-DB (Rice) LOC_Os04g55640.1 : plant-specific domain TIGR01627 family protein, expressed
MaizeGDB (Corn) Zm00025a010936 , Zm00025a019022 , Zm00025a009534
Brachypodium KQJ84976
Barley HORVU2Hr1G113570.1 , HORVU2Hr1G113560.1 , HORVU0Hr1G015370.1
Wheat TraesCS7A02G443100 , TraesCS7D02G432300 , TraesCS7B02G341900
Populus -


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cDNA sequences
Sobic.006G241900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G200100 KID-containing protein, putative, expressed -
2 Sobic.002G273100 expressed protein K19033: PSRP4, 30S ribosomal protein S31
3 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
4 Sobic.002G199100 peptidyl-prolyl cis-trans isomerase, putative, expressed K09579: peptidyl-prolyl cis-trans isomerase NIMA-interacting 4
5 Sobic.001G172800 RNA recognition motif containing protein, putative, expressed K09564: peptidyl-prolyl isomerase E (cyclophilin E)
6 Sobic.003G013600 expressed protein -
7 Sobic.002G427900 wound-induced protein WI12, putative, expressed -
8 Sobic.004G280401 - -
9 Sobic.004G309500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.004G333300 serine-rich protein, putative, expressed -
11 Sobic.010G250600 expressed protein -
12 Sobic.006G266300 expressed protein -
13 Sobic.005G155600 LYK, putative, expressed -
14 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
15 Sobic.004G110400 RING-H2 finger protein, putative, expressed -
16 Sobic.010G214900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@4-Coumarate-CoA ligase(PubMedID : 22313236)@AMP-binding domain containing protein, expressed K01904: 4-coumarate--CoA ligase
17 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
18 Sobic.006G279700 POT family protein, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
19 Sobic.003G034400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger/CCCH transcription factor, putative, expressed -
20 Sobic.005G050200 abscisic stress-ripening, putative, expressed -


Gene co-expression network
sample Sobic006G241900 Sobic006G241900 Sobic007G200100 Sobic007G200100 Sobic006G241900--Sobic007G200100 Sobic002G273100 Sobic002G273100 Sobic006G241900--Sobic002G273100 Sobic002G421600 Sobic002G421600 Sobic006G241900--Sobic002G421600 Sobic002G199100 Sobic002G199100 Sobic006G241900--Sobic002G199100 Sobic001G172800 Sobic001G172800 Sobic006G241900--Sobic001G172800 Sobic003G013600 Sobic003G013600 Sobic006G241900--Sobic003G013600 Sobic002G427900 Sobic002G427900 Sobic006G241900--Sobic002G427900 Sobic004G280401 Sobic004G280401 Sobic006G241900--Sobic004G280401 Sobic004G309500 Sobic004G309500 Sobic006G241900--Sobic004G309500 Sobic007G200100--Sobic002G273100 Sobic006G100200 Sobic006G100200 Sobic007G200100--Sobic006G100200 Sobic001G041000 Sobic001G041000 Sobic007G200100--Sobic001G041000 Sobic005G107300 Sobic005G107300 Sobic007G200100--Sobic005G107300 Sobic004G166400 Sobic004G166400 Sobic007G200100--Sobic004G166400 Sobic007G200100--Sobic006G241900 Sobic005G155600 Sobic005G155600 Sobic007G200100--Sobic005G155600 Sobic004G035200 Sobic004G035200 Sobic007G200100--Sobic004G035200 Sobic009G100800 Sobic009G100800 Sobic007G200100--Sobic009G100800 Sobic001G526900 Sobic001G526900 Sobic002G273100--Sobic001G526900 Sobic004G352900 Sobic004G352900 Sobic002G273100--Sobic004G352900 Sobic002G273100--Sobic007G200100 Sobic002G273100--Sobic002G427900 Sobic004G014000 Sobic004G014000 Sobic002G273100--Sobic004G014000 Sobic006G246100 Sobic006G246100 Sobic002G273100--Sobic006G246100 Sobic002G273100--Sobic004G035200 Sobic001G061101 Sobic001G061101 Sobic002G273100--Sobic001G061101 Sobic001G530350 Sobic001G530350 Sobic002G273100--Sobic001G530350 Sobic007G126100 Sobic007G126100 Sobic002G421600--Sobic007G126100 Sobic006G269200 Sobic006G269200 Sobic002G421600--Sobic006G269200 Sobic007G177100 Sobic007G177100 Sobic002G421600--Sobic007G177100 Sobic002G254200 Sobic002G254200 Sobic002G421600--Sobic002G254200 Sobic003G034400 Sobic003G034400 Sobic002G421600--Sobic003G034400 Sobic003G293900 Sobic003G293900 Sobic002G421600--Sobic003G293900 Sobic001G225200 Sobic001G225200 Sobic002G421600--Sobic001G225200 Sobic006G047000 Sobic006G047000 Sobic002G421600--Sobic006G047000 Sobic006G241600 Sobic006G241600 Sobic002G421600--Sobic006G241600 Sobic007G106400 Sobic007G106400 Sobic002G199100--Sobic007G106400 Sobic007G022200 Sobic007G022200 Sobic002G199100--Sobic007G022200 Sobic010G171400 Sobic010G171400 Sobic002G199100--Sobic010G171400 Sobic002G046700 Sobic002G046700 Sobic002G199100--Sobic002G046700 Sobic002G199100--Sobic001G172800 Sobic002G199100--Sobic002G273100 Sobic007G046400 Sobic007G046400 Sobic002G199100--Sobic007G046400 Sobic004G307700 Sobic004G307700 Sobic002G199100--Sobic004G307700 Sobic002G199100--Sobic006G241900 Sobic002G005700 Sobic002G005700 Sobic001G172800--Sobic002G005700 Sobic010G094500 Sobic010G094500 Sobic001G172800--Sobic010G094500 Sobic007G184400 Sobic007G184400 Sobic001G172800--Sobic007G184400 Sobic001G172800--Sobic002G199100 Sobic004G244800 Sobic004G244800 Sobic001G172800--Sobic004G244800 Sobic007G216600 Sobic007G216600 Sobic001G172800--Sobic007G216600 Sobic009G225900 Sobic009G225900 Sobic001G172800--Sobic009G225900 Sobic001G172800--Sobic002G273100 Sobic006G212000 Sobic006G212000 Sobic001G172800--Sobic006G212000 Sobic003G123300 Sobic003G123300 Sobic003G013600--Sobic003G123300 Sobic009G080200 Sobic009G080200 Sobic003G013600--Sobic009G080200 Sobic003G085700 Sobic003G085700 Sobic003G013600--Sobic003G085700 Sobic001G225600 Sobic001G225600 Sobic003G013600--Sobic001G225600 Sobic003G013600--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G013600--Sobic010G267000 Sobic003G296300 Sobic003G296300 Sobic003G013600--Sobic003G296300 Sobic001G293800 Sobic001G293800 Sobic003G013600--Sobic001G293800 Sobic001G225400 Sobic001G225400 Sobic003G013600--Sobic001G225400 Sobic002G427900--Sobic004G352900 Sobic010G066300 Sobic010G066300 Sobic002G427900--Sobic010G066300 Sobic002G427900--Sobic001G526900 Sobic009G156300 Sobic009G156300 Sobic002G427900--Sobic009G156300 Sobic002G427900--Sobic004G014000 Sobic001G285000 Sobic001G285000 Sobic002G427900--Sobic001G285000 Sobic003G299800 Sobic003G299800 Sobic002G427900--Sobic003G299800 Sobic003G116700 Sobic003G116700 Sobic002G427900--Sobic003G116700 Sobic002G254650 Sobic002G254650 Sobic002G427900--Sobic002G254650 Sobic010G171501 Sobic010G171501 Sobic004G280401--Sobic010G171501 Sobic003G325700 Sobic003G325700 Sobic004G280401--Sobic003G325700 Sobic001G280700 Sobic001G280700 Sobic004G280401--Sobic001G280700 Sobic001G345400 Sobic001G345400 Sobic004G280401--Sobic001G345400 Sobic009G234000 Sobic009G234000 Sobic004G280401--Sobic009G234000 Sobic004G110400 Sobic004G110400 Sobic004G280401--Sobic004G110400 Sobic001G130400 Sobic001G130400 Sobic004G280401--Sobic001G130400 Sobic003G277500 Sobic003G277500 Sobic004G280401--Sobic003G277500 Sobic004G333300 Sobic004G333300 Sobic004G280401--Sobic004G333300 Sobic005G000100 Sobic005G000100 Sobic004G309500--Sobic005G000100 Sobic002G117200 Sobic002G117200 Sobic004G309500--Sobic002G117200 Sobic004G309500--Sobic004G352900 Sobic003G401400 Sobic003G401400 Sobic004G309500--Sobic003G401400 Sobic004G309500--Sobic009G156300 Sobic001G321500 Sobic001G321500 Sobic004G309500--Sobic001G321500 Sobic001G202400 Sobic001G202400 Sobic004G309500--Sobic001G202400 Sobic004G309500--Sobic004G014000 Sobic001G022600 Sobic001G022600 Sobic004G309500--Sobic001G022600
Octagon: transcription factors


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