Gene annotation
Transcriptome id Sobic.006G279700.1
Synonym Sb06g034030
Functional annotation POT family protein, expressed
UniProt A0A1Z5RFU5
Pfam PF07690
Panther DB PTHR11654 PTHR11654:SF172
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology K14638; SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G22550 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g59480.1 : POT family protein, expressed
MaizeGDB (Corn) Zm00025a057496
Brachypodium KQK02639 , KQJ84687 , KQJ85460 , KQK02769 , PNT77238 , KQK02641 , KQK02640 , KQK02642
Barley HORVU2Hr1G098120.1 , HORVU3Hr1G082490.1 , HORVU3Hr1G082490.2 , HORVU3Hr1G082490.3 , HORVU3Hr1G082490.4 , HORVU3Hr1G082490.9 , HORVU4Hr1G086920.1 , HORVU2Hr1G126100.6 , HORVU2Hr1G126100.7 , HORVU2Hr1G126100.4 , HORVU2Hr1G126100.5 , HORVU2Hr1G126100.2 , HORVU2Hr1G126100.3 , HORVU2Hr1G126100.1 , HORVU2Hr1G126100.8 , HORVU2Hr1G125130.2 , HORVU3Hr1G082490.12 , HORVU3Hr1G082490.13 , HORVU3Hr1G082490.10 , HORVU3Hr1G082490.11 , HORVU3Hr1G082490.16 , HORVU3Hr1G082490.14 , HORVU3Hr1G010570.8 , HORVU3Hr1G010570.4 , HORVU3Hr1G010570.5 , HORVU3Hr1G010570.6 , HORVU3Hr1G010570.7 , HORVU3Hr1G010570.1 , HORVU3Hr1G010570.2 , HORVU3Hr1G010570.3 , HORVU2Hr1G060870.1 , HORVU2Hr1G125130.1
Wheat TraesCS3D02G057000 , TraesCS2B02G615200 , TraesCS3D02G375600 , TraesCS3A02G056400 , TraesCS2A02G565600 , TraesCS2A02G565600 , TraesCS2D02G583500 , TraesCS3D02G056700 , TraesCS2A02G572200 , TraesCS3B02G069100 , TraesCS3A02G057000 , TraesCS3D02G375500 , TraesCS3D02G056300 , TraesCS2A02G416800 , TraesCS2D02G413900 , TraesCS2B02G626000 , TraesCS3A02G382400 , TraesCS3B02G069900 , TraesCS3B02G070200
Populus -


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cDNA sequences
Sobic.006G279700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G051100 expressed protein -
2 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
3 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
4 Sobic.001G141300 RNA recognition motif containing protein, expressed -
5 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.006G279800 expressed protein -
7 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
8 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
9 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
10 Sobic.003G245900 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.003G320600 membrane protein, putative, expressed -
12 Sobic.002G380400 heavy metal-associated domain containing protein, expressed -
13 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
14 Sobic.002G279100 "Syntelog of ZmMYB31, bind to the COMT1, CSE, and 4CL2 promroter region."(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.001G377000 auxin-repressed protein, putative, expressed -
16 Sobic.001G093600 - -
17 Sobic.001G225500 expressed protein -
18 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.003G406700 expressed protein -


Gene co-expression network
sample Sobic006G279700 Sobic006G279700 Sobic006G051100 Sobic006G051100 Sobic006G279700--Sobic006G051100 Sobic001G423100 Sobic001G423100 Sobic006G279700--Sobic001G423100 Sobic001G191200 Sobic001G191200 Sobic006G279700--Sobic001G191200 Sobic001G141300 Sobic001G141300 Sobic006G279700--Sobic001G141300 Sobic001G078200 Sobic001G078200 Sobic006G279700--Sobic001G078200 Sobic006G279800 Sobic006G279800 Sobic006G279700--Sobic006G279800 Sobic009G154600 Sobic009G154600 Sobic006G279700--Sobic009G154600 Sobic009G213400 Sobic009G213400 Sobic006G279700--Sobic009G213400 Sobic003G107300 Sobic003G107300 Sobic006G279700--Sobic003G107300 Sobic003G320600 Sobic003G320600 Sobic006G051100--Sobic003G320600 Sobic003G123300 Sobic003G123300 Sobic006G051100--Sobic003G123300 Sobic001G093600 Sobic001G093600 Sobic006G051100--Sobic001G093600 Sobic006G051100--Sobic003G107300 Sobic006G051100--Sobic006G279700 Sobic003G178700 Sobic003G178700 Sobic006G051100--Sobic003G178700 Sobic002G367700 Sobic002G367700 Sobic006G051100--Sobic002G367700 Sobic001G225500 Sobic001G225500 Sobic006G051100--Sobic001G225500 Sobic006G051100--Sobic001G191200 Sobic001G423100--Sobic009G154600 Sobic008G148400 Sobic008G148400 Sobic001G423100--Sobic008G148400 Sobic001G423100--Sobic001G191200 Sobic003G406700 Sobic003G406700 Sobic001G423100--Sobic003G406700 Sobic001G423100--Sobic001G078200 Sobic001G031300 Sobic001G031300 Sobic001G423100--Sobic001G031300 Sobic001G423100--Sobic006G279800 Sobic010G258300 Sobic010G258300 Sobic001G423100--Sobic010G258300 Sobic003G030400 Sobic003G030400 Sobic001G423100--Sobic003G030400 Sobic001G191200--Sobic003G406700 Sobic001G191200--Sobic001G078200 Sobic001G191200--Sobic009G154600 Sobic001G377000 Sobic001G377000 Sobic001G191200--Sobic001G377000 Sobic001G191200--Sobic009G213400 Sobic005G085200 Sobic005G085200 Sobic001G191200--Sobic005G085200 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G191200--Sobic001G225500 Sobic008G185900 Sobic008G185900 Sobic001G141300--Sobic008G185900 Sobic003G401400 Sobic003G401400 Sobic001G141300--Sobic003G401400 Sobic009G197000 Sobic009G197000 Sobic001G141300--Sobic009G197000 Sobic001G426400 Sobic001G426400 Sobic001G141300--Sobic001G426400 Sobic001G141300--Sobic001G191200 Sobic006G265400 Sobic006G265400 Sobic001G141300--Sobic006G265400 Sobic001G141300--Sobic006G279800 Sobic001G141300--Sobic001G423100 Sobic001G141300--Sobic001G078200 Sobic001G078200--Sobic001G191200 Sobic001G078200--Sobic005G085200 Sobic010G057300 Sobic010G057300 Sobic001G078200--Sobic010G057300 Sobic004G285800 Sobic004G285800 Sobic001G078200--Sobic004G285800 Sobic005G085600 Sobic005G085600 Sobic001G078200--Sobic005G085600 Sobic001G078200--Sobic001G423100 Sobic001G078200--Sobic003G406700 Sobic009G159700 Sobic009G159700 Sobic001G078200--Sobic009G159700 Sobic001G078200--Sobic009G213400 Sobic006G279800--Sobic005G085200 Sobic006G279800--Sobic001G191200 Sobic006G279800--Sobic003G406700 Sobic006G279800--Sobic001G423100 Sobic006G279800--Sobic009G197000 Sobic006G279800--Sobic005G085600 Sobic006G279800--Sobic010G057300 Sobic006G279800--Sobic001G225500 Sobic006G279800--Sobic001G377000 Sobic009G154600--Sobic001G191200 Sobic009G154600--Sobic003G107300 Sobic009G154600--Sobic001G423100 Sobic009G154600--Sobic008G148400 Sobic009G154600--Sobic010G258300 Sobic009G154600--Sobic003G406700 Sobic003G222300 Sobic003G222300 Sobic009G154600--Sobic003G222300 Sobic009G154600--Sobic001G031300 Sobic009G154600--Sobic009G213400 Sobic010G245100 Sobic010G245100 Sobic009G213400--Sobic010G245100 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic006G273000 Sobic006G273000 Sobic009G213400--Sobic006G273000 Sobic009G213400--Sobic003G222300 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic009G213400--Sobic001G093600 Sobic010G052500 Sobic010G052500 Sobic009G213400--Sobic010G052500 Sobic003G107300--Sobic001G093600 Sobic003G107300--Sobic009G154600 Sobic003G107300--Sobic001G191200 Sobic003G107300--Sobic003G406700 Sobic003G026700 Sobic003G026700 Sobic003G107300--Sobic003G026700 Sobic003G255100 Sobic003G255100 Sobic003G107300--Sobic003G255100 Sobic001G005500 Sobic001G005500 Sobic003G107300--Sobic001G005500 Sobic003G107300--Sobic009G213400 Sobic003G107300--Sobic003G222300
Octagon: transcription factors


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