Gene annotation
Transcriptome id Sobic.005G050200.1
Synonym Sb05g004100
Functional annotation abscisic stress-ripening, putative, expressed
UniProt C5Y5I9
Pfam PF02496
Panther DB PTHR33801 PTHR33801:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g06720.1 : abscisic stress-ripening, putative, expressed
MaizeGDB (Corn) Zm00025a012909 , Zm00025a054008 , Zm00025a056039 , Zm00025a024489 , Zm00025a011435 , Zm00025a040517
Brachypodium -
Barley HORVU4Hr1G020030.4 , HORVU4Hr1G020030.1
Wheat TraesCS2A02G301500 , TraesCS4A02G208400 , TraesCS2B02G317600 , TraesCS2D02G300100 , TraesCS4D02G109500 , TraesCS4B02G112000
Populus -


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cDNA sequences
Sobic.005G050200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G376400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.001G341300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATP-dependent protease, putative, expressed -
3 Sobic.002G426900 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
4 Sobic.001G172800 RNA recognition motif containing protein, putative, expressed K09564: peptidyl-prolyl isomerase E (cyclophilin E)
5 Sobic.001G535400 remorin, putative, expressed -
6 Sobic.002G279100 "Syntelog of ZmMYB31, bind to the COMT1, CSE, and 4CL2 promroter region."(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.007G223701 - -
8 Sobic.003G397300 - -
9 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
10 Sobic.008G185900 RNA recognition motif containing protein, expressed -
11 Sobic.010G094500 CS domain containing protein, putative, expressed -
12 Sobic.006G241200 expressed protein -
13 Sobic.001G144300 acetyltransferase, GNAT family, putative, expressed -
14 Sobic.006G163100 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
15 Sobic.004G216700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 21930910)@-(PubMedID : 24884377)@response regulator receiver domain containing protein, expressed K12127: TOC1, pseudo-response regulator 1
16 Sobic.005G072700 expressed protein -
17 Sobic.003G194200 ZmGR2c, putative, expressed -
18 Sobic.001G516500 expansin precursor, putative, expressed -
19 Sobic.002G330700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
20 Sobic.001G441500 ZOS3-07 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic005G050200 Sobic005G050200 Sobic002G376400 Sobic002G376400 Sobic005G050200--Sobic002G376400 Sobic001G341300 Sobic001G341300 Sobic005G050200--Sobic001G341300 Sobic002G426900 Sobic002G426900 Sobic005G050200--Sobic002G426900 Sobic001G172800 Sobic001G172800 Sobic005G050200--Sobic001G172800 Sobic001G535400 Sobic001G535400 Sobic005G050200--Sobic001G535400 Sobic002G279100 Sobic002G279100 Sobic005G050200--Sobic002G279100 Sobic007G223701 Sobic007G223701 Sobic005G050200--Sobic007G223701 Sobic003G397300 Sobic003G397300 Sobic005G050200--Sobic003G397300 Sobic006G213100 Sobic006G213100 Sobic005G050200--Sobic006G213100 Sobic002G376400--Sobic001G341300 Sobic004G216700 Sobic004G216700 Sobic002G376400--Sobic004G216700 Sobic003G401400 Sobic003G401400 Sobic002G376400--Sobic003G401400 Sobic008G185900 Sobic008G185900 Sobic002G376400--Sobic008G185900 Sobic009G129500 Sobic009G129500 Sobic002G376400--Sobic009G129500 Sobic009G159700 Sobic009G159700 Sobic002G376400--Sobic009G159700 Sobic009G166801 Sobic009G166801 Sobic002G376400--Sobic009G166801 Sobic005G172300 Sobic005G172300 Sobic002G376400--Sobic005G172300 Sobic010G072300 Sobic010G072300 Sobic002G376400--Sobic010G072300 Sobic001G341300--Sobic002G376400 Sobic006G159400 Sobic006G159400 Sobic001G341300--Sobic006G159400 Sobic001G341300--Sobic004G216700 Sobic001G341300--Sobic009G159700 Sobic001G341300--Sobic008G185900 Sobic001G341300--Sobic009G166801 Sobic001G253600 Sobic001G253600 Sobic001G341300--Sobic001G253600 Sobic001G516500 Sobic001G516500 Sobic001G341300--Sobic001G516500 Sobic001G341300--Sobic005G172300 Sobic007G156101 Sobic007G156101 Sobic002G426900--Sobic007G156101 Sobic005G072700 Sobic005G072700 Sobic002G426900--Sobic005G072700 Sobic009G230400 Sobic009G230400 Sobic002G426900--Sobic009G230400 Sobic001G026700 Sobic001G026700 Sobic002G426900--Sobic001G026700 Sobic007G216600 Sobic007G216600 Sobic002G426900--Sobic007G216600 Sobic001G397700 Sobic001G397700 Sobic002G426900--Sobic001G397700 Sobic008G156900 Sobic008G156900 Sobic002G426900--Sobic008G156900 Sobic002G306300 Sobic002G306300 Sobic002G426900--Sobic002G306300 Sobic006G169400 Sobic006G169400 Sobic002G426900--Sobic006G169400 Sobic002G005700 Sobic002G005700 Sobic001G172800--Sobic002G005700 Sobic010G094500 Sobic010G094500 Sobic001G172800--Sobic010G094500 Sobic007G184400 Sobic007G184400 Sobic001G172800--Sobic007G184400 Sobic002G199100 Sobic002G199100 Sobic001G172800--Sobic002G199100 Sobic004G244800 Sobic004G244800 Sobic001G172800--Sobic004G244800 Sobic001G172800--Sobic007G216600 Sobic009G225900 Sobic009G225900 Sobic001G172800--Sobic009G225900 Sobic002G273100 Sobic002G273100 Sobic001G172800--Sobic002G273100 Sobic006G212000 Sobic006G212000 Sobic001G172800--Sobic006G212000 Sobic009G162500 Sobic009G162500 Sobic001G535400--Sobic009G162500 Sobic005G169700 Sobic005G169700 Sobic001G535400--Sobic005G169700 Sobic002G205500 Sobic002G205500 Sobic001G535400--Sobic002G205500 Sobic003G296400 Sobic003G296400 Sobic001G535400--Sobic003G296400 Sobic001G339400 Sobic001G339400 Sobic001G535400--Sobic001G339400 Sobic001G224300 Sobic001G224300 Sobic001G535400--Sobic001G224300 Sobic010G086800 Sobic010G086800 Sobic001G535400--Sobic010G086800 Sobic002G003200 Sobic002G003200 Sobic001G535400--Sobic002G003200 Sobic003G062000 Sobic003G062000 Sobic001G535400--Sobic003G062000 Sobic005G085600 Sobic005G085600 Sobic002G279100--Sobic005G085600 Sobic005G085200 Sobic005G085200 Sobic002G279100--Sobic005G085200 Sobic002G279100--Sobic003G397300 Sobic010G057300 Sobic010G057300 Sobic002G279100--Sobic010G057300 Sobic006G241200 Sobic006G241200 Sobic002G279100--Sobic006G241200 Sobic007G189800 Sobic007G189800 Sobic002G279100--Sobic007G189800 Sobic002G279100--Sobic009G159700 Sobic004G285800 Sobic004G285800 Sobic002G279100--Sobic004G285800 Sobic002G279100--Sobic006G213100 Sobic008G021900 Sobic008G021900 Sobic007G223701--Sobic008G021900 Sobic007G223701--Sobic002G376400 Sobic008G004100 Sobic008G004100 Sobic007G223701--Sobic008G004100 Sobic004G163600 Sobic004G163600 Sobic007G223701--Sobic004G163600 Sobic007G210801 Sobic007G210801 Sobic007G223701--Sobic007G210801 Sobic002G107200 Sobic002G107200 Sobic007G223701--Sobic002G107200 Sobic003G128000 Sobic003G128000 Sobic007G223701--Sobic003G128000 Sobic007G223701--Sobic009G162500 Sobic003G151300 Sobic003G151300 Sobic007G223701--Sobic003G151300 Sobic003G397300--Sobic006G213100 Sobic006G194150 Sobic006G194150 Sobic003G397300--Sobic006G194150 Sobic003G328800 Sobic003G328800 Sobic003G397300--Sobic003G328800 Sobic009G214600 Sobic009G214600 Sobic003G397300--Sobic009G214600 Sobic003G397300--Sobic002G279100 Sobic003G397300--Sobic007G189800 Sobic009G064766 Sobic009G064766 Sobic003G397300--Sobic009G064766 Sobic001G194000 Sobic001G194000 Sobic003G397300--Sobic001G194000 Sobic003G397300--Sobic005G085600 Sobic006G133600 Sobic006G133600 Sobic006G213100--Sobic006G133600 Sobic006G213100--Sobic009G214600 Sobic006G213100--Sobic003G397300 Sobic006G213100--Sobic003G328800 Sobic007G191100 Sobic007G191100 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic003G044900 Sobic003G044900 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic007G099500 Sobic007G099500 Sobic006G213100--Sobic007G099500
Octagon: transcription factors


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