Gene annotation
Transcriptome id Sobic.003G397300.1
Synonym
Functional annotation -
UniProt A0A1B6Q7S1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a039393
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
2 Sobic.006G194150 - -
3 Sobic.003G328800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
4 Sobic.009G214600 possible lysine decarboxylase domain containing protein, expressed -
5 Sobic.002G279100 "Syntelog of ZmMYB31, bind to the COMT1, CSE, and 4CL2 promroter region."(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
7 Sobic.009G064766 - -
8 Sobic.001G194000 DEFL6 - Defensin and Defensin-like DEFL family, expressed -
9 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
10 Sobic.004G220300 "Phenylalanine ammonia-lyase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed K13064: phenylalanine/tyrosine ammonia-lyase
11 Sobic.001G516500 expansin precursor, putative, expressed -
12 Sobic.008G124100 - -
13 Sobic.003G148700 powdery mildew resistant protein 5, putative, expressed -
14 Sobic.005G012000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.001G082300 cytochrome P450, putative, expressed -
16 Sobic.002G270300 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
17 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
18 Sobic.006G133600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
19 Sobic.008G126200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed -
20 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -


Gene co-expression network
sample Sobic003G397300 Sobic003G397300 Sobic006G213100 Sobic006G213100 Sobic003G397300--Sobic006G213100 Sobic006G194150 Sobic006G194150 Sobic003G397300--Sobic006G194150 Sobic003G328800 Sobic003G328800 Sobic003G397300--Sobic003G328800 Sobic009G214600 Sobic009G214600 Sobic003G397300--Sobic009G214600 Sobic002G279100 Sobic002G279100 Sobic003G397300--Sobic002G279100 Sobic007G189800 Sobic007G189800 Sobic003G397300--Sobic007G189800 Sobic009G064766 Sobic009G064766 Sobic003G397300--Sobic009G064766 Sobic001G194000 Sobic001G194000 Sobic003G397300--Sobic001G194000 Sobic005G085600 Sobic005G085600 Sobic003G397300--Sobic005G085600 Sobic006G133600 Sobic006G133600 Sobic006G213100--Sobic006G133600 Sobic006G213100--Sobic009G214600 Sobic006G213100--Sobic003G397300 Sobic006G213100--Sobic003G328800 Sobic007G191100 Sobic007G191100 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic003G044900 Sobic003G044900 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic007G099500 Sobic007G099500 Sobic006G213100--Sobic007G099500 Sobic001G032100 Sobic001G032100 Sobic006G194150--Sobic001G032100 Sobic005G012000 Sobic005G012000 Sobic006G194150--Sobic005G012000 Sobic006G194150--Sobic005G085600 Sobic006G194300 Sobic006G194300 Sobic006G194150--Sobic006G194300 Sobic003G296600 Sobic003G296600 Sobic006G194150--Sobic003G296600 Sobic006G184300 Sobic006G184300 Sobic006G194150--Sobic006G184300 Sobic003G293900 Sobic003G293900 Sobic006G194150--Sobic003G293900 Sobic008G126200 Sobic008G126200 Sobic006G194150--Sobic008G126200 Sobic006G194150--Sobic003G397300 Sobic003G328800--Sobic006G213100 Sobic003G328800--Sobic005G012000 Sobic004G164650 Sobic004G164650 Sobic003G328800--Sobic004G164650 Sobic003G328800--Sobic003G397300 Sobic003G328800--Sobic008G126200 Sobic003G380500 Sobic003G380500 Sobic003G328800--Sobic003G380500 Sobic001G082300 Sobic001G082300 Sobic003G328800--Sobic001G082300 Sobic008G136000 Sobic008G136000 Sobic003G328800--Sobic008G136000 Sobic003G328800--Sobic003G044900 Sobic009G214600--Sobic003G044900 Sobic007G094801 Sobic007G094801 Sobic009G214600--Sobic007G094801 SobicK016900 SobicK016900 Sobic009G214600--SobicK016900 Sobic004G016500 Sobic004G016500 Sobic009G214600--Sobic004G016500 Sobic004G240900 Sobic004G240900 Sobic009G214600--Sobic004G240900 Sobic009G214600--Sobic006G133600 Sobic009G214600--Sobic006G213100 Sobic002G150766 Sobic002G150766 Sobic009G214600--Sobic002G150766 Sobic001G046600 Sobic001G046600 Sobic009G214600--Sobic001G046600 Sobic002G279100--Sobic005G085600 Sobic005G085200 Sobic005G085200 Sobic002G279100--Sobic005G085200 Sobic002G279100--Sobic003G397300 Sobic010G057300 Sobic010G057300 Sobic002G279100--Sobic010G057300 Sobic006G241200 Sobic006G241200 Sobic002G279100--Sobic006G241200 Sobic002G279100--Sobic007G189800 Sobic009G159700 Sobic009G159700 Sobic002G279100--Sobic009G159700 Sobic004G285800 Sobic004G285800 Sobic002G279100--Sobic004G285800 Sobic002G279100--Sobic006G213100 Sobic001G277000 Sobic001G277000 Sobic007G189800--Sobic001G277000 Sobic010G146200 Sobic010G146200 Sobic007G189800--Sobic010G146200 Sobic008G124100 Sobic008G124100 Sobic007G189800--Sobic008G124100 Sobic007G189800--Sobic009G064766 Sobic007G189800--Sobic005G085600 Sobic007G189800--Sobic005G085200 Sobic005G003200 Sobic005G003200 Sobic007G189800--Sobic005G003200 Sobic009G078500 Sobic009G078500 Sobic007G189800--Sobic009G078500 Sobic006G249000 Sobic006G249000 Sobic007G189800--Sobic006G249000 Sobic009G064766--Sobic001G277000 Sobic009G064766--Sobic008G124100 Sobic009G064766--Sobic009G078500 Sobic009G064766--Sobic007G189800 Sobic009G064766--Sobic010G146200 Sobic003G176100 Sobic003G176100 Sobic009G064766--Sobic003G176100 Sobic010G270300 Sobic010G270300 Sobic009G064766--Sobic010G270300 Sobic005G130100 Sobic005G130100 Sobic009G064766--Sobic005G130100 Sobic004G199600 Sobic004G199600 Sobic009G064766--Sobic004G199600 Sobic001G194000--Sobic003G397300 Sobic001G194000--Sobic006G213100 Sobic001G194000--Sobic001G082300 Sobic001G069800 Sobic001G069800 Sobic001G194000--Sobic001G069800 Sobic006G241300 Sobic006G241300 Sobic001G194000--Sobic006G241300 Sobic004G318600 Sobic004G318600 Sobic001G194000--Sobic004G318600 Sobic008G036900 Sobic008G036900 Sobic001G194000--Sobic008G036900 Sobic001G258600 Sobic001G258600 Sobic001G194000--Sobic001G258600 Sobic001G194000--Sobic008G136000 Sobic005G085600--Sobic005G085200 Sobic005G085600--Sobic007G189800 Sobic005G085600--Sobic001G032100 Sobic009G180200 Sobic009G180200 Sobic005G085600--Sobic009G180200 Sobic001G363100 Sobic001G363100 Sobic005G085600--Sobic001G363100 Sobic005G085600--Sobic009G159700 Sobic005G085600--Sobic004G199600 Sobic005G085600--Sobic009G078500 Sobic005G085600--Sobic010G057300
Octagon: transcription factors


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