Gene annotation
Transcriptome id Sobic.010G094500.1,Sobic.010G094500.3,Sobic.010G094500.2
Synonym Sb10g008230, BOB1
Functional annotation CS domain containing protein, putative, expressed
UniProt A0A194YJ74 , A0A194YI62 , A0A194YI58
Pfam PF04969
Panther DB PTHR12356 PTHR12356:SF3
NCBI CDD KOG2265; Nuclear distribution protein NUDC
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53400 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os06g12530.1 : CS domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042608 , Zm00025a049452
Brachypodium KQK03016 , KQK18841
Barley HORVU7Hr1G038520.1 , HORVU7Hr1G038520.3 , HORVU7Hr1G038520.5 , HORVU7Hr1G038520.4 , HORVU7Hr1G038520.7 , HORVU7Hr1G038520.6 , HORVU7Hr1G038520.8 , HORVU7Hr1G038520.2
Wheat TraesCS7A02G189600 , TraesCS7A02G189600 , TraesCS7D02G190700 , TraesCS7D02G190700 , TraesCS7B02G094500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G005700 - -
2 Sobic.001G172800 RNA recognition motif containing protein, putative, expressed K09564: peptidyl-prolyl isomerase E (cyclophilin E)
3 Sobic.001G416900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
4 Sobic.004G128000 expressed protein -
5 Sobic.001G216800 expressed protein -
6 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
7 Sobic.002G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.003G286100 mitochondrial import receptor subunit TOM7-1, putative, expressed K17771: mitochondrial import receptor subunit TOM7
9 Sobic.004G066000 expressed protein -
10 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
11 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
12 Sobic.001G417000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11252: histone H2B
13 Sobic.009G123000 expressed protein -
14 Sobic.001G416800 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
15 Sobic.002G253000 no apical meristem protein, putative, expressed -
16 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
17 Sobic.010G013100 expressed protein -
18 Sobic.004G230900 RNA recognition motif containing protein, putative, expressed -
19 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -
20 Sobic.005G050200 abscisic stress-ripening, putative, expressed -


Gene co-expression network
sample Sobic010G094500 Sobic010G094500 Sobic002G005700 Sobic002G005700 Sobic010G094500--Sobic002G005700 Sobic001G172800 Sobic001G172800 Sobic010G094500--Sobic001G172800 Sobic001G416900 Sobic001G416900 Sobic010G094500--Sobic001G416900 Sobic004G128000 Sobic004G128000 Sobic010G094500--Sobic004G128000 Sobic001G216800 Sobic001G216800 Sobic010G094500--Sobic001G216800 Sobic004G259700 Sobic004G259700 Sobic010G094500--Sobic004G259700 Sobic002G209300 Sobic002G209300 Sobic010G094500--Sobic002G209300 Sobic003G286100 Sobic003G286100 Sobic010G094500--Sobic003G286100 Sobic004G066000 Sobic004G066000 Sobic010G094500--Sobic004G066000 Sobic007G184400 Sobic007G184400 Sobic002G005700--Sobic007G184400 Sobic002G005700--Sobic001G172800 Sobic002G005700--Sobic010G094500 Sobic005G121100 Sobic005G121100 Sobic002G005700--Sobic005G121100 Sobic002G384200 Sobic002G384200 Sobic002G005700--Sobic002G384200 Sobic003G022800 Sobic003G022800 Sobic002G005700--Sobic003G022800 Sobic007G200100 Sobic007G200100 Sobic002G005700--Sobic007G200100 Sobic006G212000 Sobic006G212000 Sobic002G005700--Sobic006G212000 Sobic006G016600 Sobic006G016600 Sobic002G005700--Sobic006G016600 Sobic001G172800--Sobic002G005700 Sobic001G172800--Sobic010G094500 Sobic001G172800--Sobic007G184400 Sobic002G199100 Sobic002G199100 Sobic001G172800--Sobic002G199100 Sobic004G244800 Sobic004G244800 Sobic001G172800--Sobic004G244800 Sobic007G216600 Sobic007G216600 Sobic001G172800--Sobic007G216600 Sobic009G225900 Sobic009G225900 Sobic001G172800--Sobic009G225900 Sobic002G273100 Sobic002G273100 Sobic001G172800--Sobic002G273100 Sobic001G172800--Sobic006G212000 Sobic001G416800 Sobic001G416800 Sobic001G416900--Sobic001G416800 Sobic003G127600 Sobic003G127600 Sobic001G416900--Sobic003G127600 Sobic001G417000 Sobic001G417000 Sobic001G416900--Sobic001G417000 Sobic002G059200 Sobic002G059200 Sobic001G416900--Sobic002G059200 Sobic009G123000 Sobic009G123000 Sobic001G416900--Sobic009G123000 Sobic001G416900--Sobic002G209300 Sobic002G403400 Sobic002G403400 Sobic001G416900--Sobic002G403400 Sobic002G056300 Sobic002G056300 Sobic001G416900--Sobic002G056300 Sobic003G300701 Sobic003G300701 Sobic001G416900--Sobic003G300701 Sobic009G015000 Sobic009G015000 Sobic004G128000--Sobic009G015000 Sobic010G057100 Sobic010G057100 Sobic004G128000--Sobic010G057100 Sobic004G099500 Sobic004G099500 Sobic004G128000--Sobic004G099500 Sobic007G172300 Sobic007G172300 Sobic004G128000--Sobic007G172300 Sobic009G206700 Sobic009G206700 Sobic004G128000--Sobic009G206700 Sobic007G045700 Sobic007G045700 Sobic004G128000--Sobic007G045700 Sobic002G253000 Sobic002G253000 Sobic004G128000--Sobic002G253000 Sobic003G338966 Sobic003G338966 Sobic004G128000--Sobic003G338966 Sobic009G177700 Sobic009G177700 Sobic004G128000--Sobic009G177700 Sobic001G216800--Sobic001G416900 Sobic004G025200 Sobic004G025200 Sobic001G216800--Sobic004G025200 Sobic001G080600 Sobic001G080600 Sobic001G216800--Sobic001G080600 Sobic010G013100 Sobic010G013100 Sobic001G216800--Sobic010G013100 Sobic001G430000 Sobic001G430000 Sobic001G216800--Sobic001G430000 Sobic001G216800--Sobic002G209300 Sobic003G184500 Sobic003G184500 Sobic001G216800--Sobic003G184500 Sobic003G399400 Sobic003G399400 Sobic001G216800--Sobic003G399400 Sobic010G099400 Sobic010G099400 Sobic001G216800--Sobic010G099400 Sobic004G259700--Sobic001G416900 Sobic009G167500 Sobic009G167500 Sobic004G259700--Sobic009G167500 Sobic004G259700--Sobic009G123000 Sobic004G259700--Sobic004G099500 Sobic004G259700--Sobic001G416800 Sobic004G259700--Sobic003G127600 Sobic004G259700--Sobic007G172300 Sobic003G057366 Sobic003G057366 Sobic004G259700--Sobic003G057366 Sobic007G168400 Sobic007G168400 Sobic004G259700--Sobic007G168400 Sobic001G158000 Sobic001G158000 Sobic002G209300--Sobic001G158000 Sobic002G209300--Sobic002G403400 Sobic001G193400 Sobic001G193400 Sobic002G209300--Sobic001G193400 Sobic002G209300--Sobic002G059200 Sobic004G265400 Sobic004G265400 Sobic002G209300--Sobic004G265400 Sobic003G350100 Sobic003G350100 Sobic002G209300--Sobic003G350100 Sobic007G221800 Sobic007G221800 Sobic002G209300--Sobic007G221800 Sobic004G230900 Sobic004G230900 Sobic002G209300--Sobic004G230900 Sobic007G149600 Sobic007G149600 Sobic002G209300--Sobic007G149600 Sobic003G286100--Sobic002G209300 Sobic003G286100--Sobic001G158000 Sobic003G286100--Sobic004G265400 Sobic003G286100--Sobic002G403400 Sobic003G286100--Sobic002G059200 Sobic004G013500 Sobic004G013500 Sobic003G286100--Sobic004G013500 Sobic003G286100--Sobic001G193400 Sobic003G286100--Sobic007G221800 Sobic003G286100--Sobic007G149600 Sobic004G275500 Sobic004G275500 Sobic004G066000--Sobic004G275500 Sobic004G066000--Sobic001G158000 Sobic004G066000--Sobic007G221800 Sobic004G066000--Sobic007G149600 Sobic007G081300 Sobic007G081300 Sobic004G066000--Sobic007G081300 Sobic004G066000--Sobic004G265400 Sobic001G519300 Sobic001G519300 Sobic004G066000--Sobic001G519300 Sobic004G066000--Sobic001G193400 Sobic003G067300 Sobic003G067300 Sobic004G066000--Sobic003G067300
Octagon: transcription factors


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