Gene annotation
Transcriptome id Sobic.002G005700.1
Synonym Sb02g000730
Functional annotation -
UniProt C5X769
Pfam PF07890
Panther DB PTHR13245
NCBI CDD KOG2974; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48240 : -
RAP-DB (Rice) LOC_Os11g16480.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a044865
Brachypodium KQK04698
Barley -
Wheat TraesCS1A02G069700
Populus -


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cDNA sequences
Sobic.002G005700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G184400 60S ribosomal protein L7, putative, expressed K02937: RP-L7e, large subunit ribosomal protein L7e
2 Sobic.001G172800 RNA recognition motif containing protein, putative, expressed K09564: peptidyl-prolyl isomerase E (cyclophilin E)
3 Sobic.010G094500 CS domain containing protein, putative, expressed -
4 Sobic.005G121100 ZOS11-03 - C2H2 zinc finger protein, expressed -
5 Sobic.002G384200 expressed protein -
6 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
7 Sobic.007G200100 KID-containing protein, putative, expressed -
8 Sobic.006G212000 PPR repeat domain containing protein, putative, expressed -
9 Sobic.006G016600 OsSigP3 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09648: mitochondrial inner membrane protease subunit 2
10 Sobic.002G293200 signal peptidase complex subunit 3, putative, expressed K12948: SPCS3, signal peptidase complex subunit 3
11 Sobic.003G219400 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
12 Sobic.003G152700 craniofacial development protein 1, putative, expressed -
13 Sobic.004G080400 hrpN-interacting protein from Malus, putative, expressed -
14 Sobic.004G175700 tetratricopeptide repeat domain containing protein, expressed -
15 Sobic.006G266100 expressed protein -
16 Sobic.004G085200 protein of unknown function domain containing protein, expressed -
17 Sobic.001G047100 OTU-like cysteine protease family protein, putative, expressed K18342: OTU domain-containing protein 6
18 Sobic.002G126200 expressed protein -
19 Sobic.004G167100 rar1, putative, expressed K13458: disease resistance protein
20 Sobic.004G244800 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e


Gene co-expression network
sample Sobic002G005700 Sobic002G005700 Sobic007G184400 Sobic007G184400 Sobic002G005700--Sobic007G184400 Sobic001G172800 Sobic001G172800 Sobic002G005700--Sobic001G172800 Sobic010G094500 Sobic010G094500 Sobic002G005700--Sobic010G094500 Sobic005G121100 Sobic005G121100 Sobic002G005700--Sobic005G121100 Sobic002G384200 Sobic002G384200 Sobic002G005700--Sobic002G384200 Sobic003G022800 Sobic003G022800 Sobic002G005700--Sobic003G022800 Sobic007G200100 Sobic007G200100 Sobic002G005700--Sobic007G200100 Sobic006G212000 Sobic006G212000 Sobic002G005700--Sobic006G212000 Sobic006G016600 Sobic006G016600 Sobic002G005700--Sobic006G016600 Sobic007G184400--Sobic002G005700 Sobic004G085200 Sobic004G085200 Sobic007G184400--Sobic004G085200 Sobic002G279000 Sobic002G279000 Sobic007G184400--Sobic002G279000 Sobic001G094500 Sobic001G094500 Sobic007G184400--Sobic001G094500 Sobic003G025200 Sobic003G025200 Sobic007G184400--Sobic003G025200 Sobic004G175700 Sobic004G175700 Sobic007G184400--Sobic004G175700 Sobic001G543300 Sobic001G543300 Sobic007G184400--Sobic001G543300 Sobic002G007100 Sobic002G007100 Sobic007G184400--Sobic002G007100 Sobic008G058300 Sobic008G058300 Sobic007G184400--Sobic008G058300 Sobic001G172800--Sobic002G005700 Sobic001G172800--Sobic010G094500 Sobic001G172800--Sobic007G184400 Sobic002G199100 Sobic002G199100 Sobic001G172800--Sobic002G199100 Sobic004G244800 Sobic004G244800 Sobic001G172800--Sobic004G244800 Sobic007G216600 Sobic007G216600 Sobic001G172800--Sobic007G216600 Sobic009G225900 Sobic009G225900 Sobic001G172800--Sobic009G225900 Sobic002G273100 Sobic002G273100 Sobic001G172800--Sobic002G273100 Sobic001G172800--Sobic006G212000 Sobic010G094500--Sobic002G005700 Sobic010G094500--Sobic001G172800 Sobic001G416900 Sobic001G416900 Sobic010G094500--Sobic001G416900 Sobic004G128000 Sobic004G128000 Sobic010G094500--Sobic004G128000 Sobic001G216800 Sobic001G216800 Sobic010G094500--Sobic001G216800 Sobic004G259700 Sobic004G259700 Sobic010G094500--Sobic004G259700 Sobic002G209300 Sobic002G209300 Sobic010G094500--Sobic002G209300 Sobic003G286100 Sobic003G286100 Sobic010G094500--Sobic003G286100 Sobic004G066000 Sobic004G066000 Sobic010G094500--Sobic004G066000 Sobic005G121100--Sobic002G384200 Sobic005G121100--Sobic003G022800 Sobic007G213600 Sobic007G213600 Sobic005G121100--Sobic007G213600 Sobic006G075801 Sobic006G075801 Sobic005G121100--Sobic006G075801 Sobic006G180600 Sobic006G180600 Sobic005G121100--Sobic006G180600 Sobic004G342900 Sobic004G342900 Sobic005G121100--Sobic004G342900 Sobic001G324900 Sobic001G324900 Sobic005G121100--Sobic001G324900 Sobic005G121100--Sobic002G005700 Sobic001G405900 Sobic001G405900 Sobic005G121100--Sobic001G405900 Sobic002G384200--Sobic005G121100 Sobic002G384200--Sobic006G016600 Sobic002G384200--Sobic006G180600 Sobic002G384200--Sobic001G324900 Sobic009G206700 Sobic009G206700 Sobic002G384200--Sobic009G206700 Sobic001G047100 Sobic001G047100 Sobic002G384200--Sobic001G047100 Sobic010G076400 Sobic010G076400 Sobic002G384200--Sobic010G076400 Sobic003G358300 Sobic003G358300 Sobic002G384200--Sobic003G358300 Sobic010G054200 Sobic010G054200 Sobic002G384200--Sobic010G054200 Sobic007G169000 Sobic007G169000 Sobic003G022800--Sobic007G169000 Sobic010G045200 Sobic010G045200 Sobic003G022800--Sobic010G045200 Sobic004G356600 Sobic004G356600 Sobic003G022800--Sobic004G356600 Sobic007G085350 Sobic007G085350 Sobic003G022800--Sobic007G085350 Sobic008G086401 Sobic008G086401 Sobic003G022800--Sobic008G086401 Sobic009G167300 Sobic009G167300 Sobic003G022800--Sobic009G167300 Sobic003G201300 Sobic003G201300 Sobic003G022800--Sobic003G201300 Sobic009G116766 Sobic009G116766 Sobic003G022800--Sobic009G116766 Sobic005G087600 Sobic005G087600 Sobic003G022800--Sobic005G087600 Sobic007G200100--Sobic002G273100 Sobic006G100200 Sobic006G100200 Sobic007G200100--Sobic006G100200 Sobic001G041000 Sobic001G041000 Sobic007G200100--Sobic001G041000 Sobic005G107300 Sobic005G107300 Sobic007G200100--Sobic005G107300 Sobic004G166400 Sobic004G166400 Sobic007G200100--Sobic004G166400 Sobic006G241900 Sobic006G241900 Sobic007G200100--Sobic006G241900 Sobic005G155600 Sobic005G155600 Sobic007G200100--Sobic005G155600 Sobic004G035200 Sobic004G035200 Sobic007G200100--Sobic004G035200 Sobic009G100800 Sobic009G100800 Sobic007G200100--Sobic009G100800 Sobic006G212000--Sobic008G086401 Sobic002G293900 Sobic002G293900 Sobic006G212000--Sobic002G293900 Sobic003G222400 Sobic003G222400 Sobic006G212000--Sobic003G222400 Sobic004G357900 Sobic004G357900 Sobic006G212000--Sobic004G357900 Sobic002G120200 Sobic002G120200 Sobic006G212000--Sobic002G120200 Sobic006G212000--Sobic004G356600 Sobic002G034400 Sobic002G034400 Sobic006G212000--Sobic002G034400 Sobic006G212000--Sobic003G022800 Sobic003G365400 Sobic003G365400 Sobic006G212000--Sobic003G365400 Sobic006G016600--Sobic002G384200 Sobic003G041300 Sobic003G041300 Sobic006G016600--Sobic003G041300 Sobic003G049800 Sobic003G049800 Sobic006G016600--Sobic003G049800 Sobic003G030000 Sobic003G030000 Sobic006G016600--Sobic003G030000 Sobic009G107200 Sobic009G107200 Sobic006G016600--Sobic009G107200 Sobic006G016600--Sobic004G175700 Sobic006G016600--Sobic006G180600 Sobic007G192100 Sobic007G192100 Sobic006G016600--Sobic007G192100 Sobic002G293200 Sobic002G293200 Sobic006G016600--Sobic002G293200
Octagon: transcription factors


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