Gene annotation
Transcriptome id Sobic.004G080400.3,Sobic.004G080400.1
Synonym Sb04g006640
Functional annotation hrpN-interacting protein from Malus, putative, expressed
UniProt C5XXH9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G15395 : -
RAP-DB (Rice) LOC_Os02g10370.1 : hrpN-interacting protein from Malus, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS6A02G159600 , TraesCS6D02G152900 , TraesCS6B02G191700
Populus -


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cDNA sequences
Sobic.004G080400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
2 Sobic.003G041300 frigida, putative, expressed -
3 Sobic.007G169000 similar to Putative uncharacterized protein P0562A06.5(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
4 Sobic.002G293200 signal peptidase complex subunit 3, putative, expressed K12948: SPCS3, signal peptidase complex subunit 3
5 Sobic.006G016600 OsSigP3 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09648: mitochondrial inner membrane protease subunit 2
6 Sobic.008G086401 - -
7 Sobic.005G121100 ZOS11-03 - C2H2 zinc finger protein, expressed -
8 Sobic.002G005700 - -
9 Sobic.002G126200 expressed protein -
10 Sobic.008G117100 expressed protein -
11 Sobic.010G257600 Rer1 protein, putative, expressed -
12 Sobic.003G421800 Ser/Thr protein phosphatase family protein, putative, expressed -
13 Sobic.003G016400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G378401 - -
15 Sobic.001G011800 SAM domain containing protein, putative, expressed -
16 Sobic.004G028800 expressed protein K19042: E3 ubiquitin-protein ligase BOI and related proteins
17 Sobic.004G009100 AGAP000425-PA, putative, expressed K13120: protein FAM32A
18 Sobic.006G180600 expressed protein -
19 Sobic.006G266100 expressed protein -
20 Sobic.003G152700 craniofacial development protein 1, putative, expressed -


Gene co-expression network
sample Sobic004G080400 Sobic004G080400 Sobic003G022800 Sobic003G022800 Sobic004G080400--Sobic003G022800 Sobic003G041300 Sobic003G041300 Sobic004G080400--Sobic003G041300 Sobic007G169000 Sobic007G169000 Sobic004G080400--Sobic007G169000 Sobic002G293200 Sobic002G293200 Sobic004G080400--Sobic002G293200 Sobic006G016600 Sobic006G016600 Sobic004G080400--Sobic006G016600 Sobic008G086401 Sobic008G086401 Sobic004G080400--Sobic008G086401 Sobic005G121100 Sobic005G121100 Sobic004G080400--Sobic005G121100 Sobic002G005700 Sobic002G005700 Sobic004G080400--Sobic002G005700 Sobic002G126200 Sobic002G126200 Sobic004G080400--Sobic002G126200 Sobic003G022800--Sobic007G169000 Sobic010G045200 Sobic010G045200 Sobic003G022800--Sobic010G045200 Sobic004G356600 Sobic004G356600 Sobic003G022800--Sobic004G356600 Sobic007G085350 Sobic007G085350 Sobic003G022800--Sobic007G085350 Sobic003G022800--Sobic008G086401 Sobic009G167300 Sobic009G167300 Sobic003G022800--Sobic009G167300 Sobic003G201300 Sobic003G201300 Sobic003G022800--Sobic003G201300 Sobic009G116766 Sobic009G116766 Sobic003G022800--Sobic009G116766 Sobic005G087600 Sobic005G087600 Sobic003G022800--Sobic005G087600 Sobic003G041300--Sobic006G016600 Sobic007G069700 Sobic007G069700 Sobic003G041300--Sobic007G069700 Sobic004G175700 Sobic004G175700 Sobic003G041300--Sobic004G175700 Sobic007G163600 Sobic007G163600 Sobic003G041300--Sobic007G163600 Sobic004G305700 Sobic004G305700 Sobic003G041300--Sobic004G305700 Sobic001G099800 Sobic001G099800 Sobic003G041300--Sobic001G099800 Sobic006G254300 Sobic006G254300 Sobic003G041300--Sobic006G254300 Sobic003G041300--Sobic004G080400 Sobic007G162500 Sobic007G162500 Sobic003G041300--Sobic007G162500 Sobic007G169000--Sobic003G022800 Sobic002G171600 Sobic002G171600 Sobic007G169000--Sobic002G171600 Sobic007G209100 Sobic007G209100 Sobic007G169000--Sobic007G209100 Sobic004G342900 Sobic004G342900 Sobic007G169000--Sobic004G342900 Sobic004G296100 Sobic004G296100 Sobic007G169000--Sobic004G296100 Sobic009G178900 Sobic009G178900 Sobic007G169000--Sobic009G178900 Sobic003G337100 Sobic003G337100 Sobic007G169000--Sobic003G337100 Sobic003G364700 Sobic003G364700 Sobic007G169000--Sobic003G364700 Sobic003G047300 Sobic003G047300 Sobic007G169000--Sobic003G047300 Sobic002G293200--Sobic005G121100 Sobic002G293200--Sobic006G016600 Sobic003G049800 Sobic003G049800 Sobic002G293200--Sobic003G049800 Sobic001G041000 Sobic001G041000 Sobic002G293200--Sobic001G041000 Sobic002G384200 Sobic002G384200 Sobic002G293200--Sobic002G384200 Sobic004G128000 Sobic004G128000 Sobic002G293200--Sobic004G128000 Sobic002G293200--Sobic002G005700 Sobic002G293200--Sobic004G080400 Sobic006G066600 Sobic006G066600 Sobic002G293200--Sobic006G066600 Sobic006G016600--Sobic002G384200 Sobic006G016600--Sobic003G041300 Sobic006G016600--Sobic003G049800 Sobic003G030000 Sobic003G030000 Sobic006G016600--Sobic003G030000 Sobic009G107200 Sobic009G107200 Sobic006G016600--Sobic009G107200 Sobic006G016600--Sobic004G175700 Sobic006G180600 Sobic006G180600 Sobic006G016600--Sobic006G180600 Sobic007G192100 Sobic007G192100 Sobic006G016600--Sobic007G192100 Sobic006G016600--Sobic002G293200 Sobic008G086401--Sobic003G022800 Sobic006G212000 Sobic006G212000 Sobic008G086401--Sobic006G212000 Sobic004G357900 Sobic004G357900 Sobic008G086401--Sobic004G357900 Sobic008G086401--Sobic004G356600 Sobic005G097700 Sobic005G097700 Sobic008G086401--Sobic005G097700 Sobic001G256900 Sobic001G256900 Sobic008G086401--Sobic001G256900 Sobic003G222400 Sobic003G222400 Sobic008G086401--Sobic003G222400 Sobic009G070900 Sobic009G070900 Sobic008G086401--Sobic009G070900 Sobic008G086401--Sobic007G169000 Sobic005G121100--Sobic002G384200 Sobic005G121100--Sobic003G022800 Sobic007G213600 Sobic007G213600 Sobic005G121100--Sobic007G213600 Sobic006G075801 Sobic006G075801 Sobic005G121100--Sobic006G075801 Sobic005G121100--Sobic006G180600 Sobic005G121100--Sobic004G342900 Sobic001G324900 Sobic001G324900 Sobic005G121100--Sobic001G324900 Sobic005G121100--Sobic002G005700 Sobic001G405900 Sobic001G405900 Sobic005G121100--Sobic001G405900 Sobic007G184400 Sobic007G184400 Sobic002G005700--Sobic007G184400 Sobic001G172800 Sobic001G172800 Sobic002G005700--Sobic001G172800 Sobic010G094500 Sobic010G094500 Sobic002G005700--Sobic010G094500 Sobic002G005700--Sobic005G121100 Sobic002G005700--Sobic002G384200 Sobic002G005700--Sobic003G022800 Sobic007G200100 Sobic007G200100 Sobic002G005700--Sobic007G200100 Sobic002G005700--Sobic006G212000 Sobic002G005700--Sobic006G016600 Sobic002G126200--Sobic006G016600 Sobic001G374800 Sobic001G374800 Sobic002G126200--Sobic001G374800 Sobic002G126200--Sobic004G080400 Sobic001G448200 Sobic001G448200 Sobic002G126200--Sobic001G448200 Sobic002G126200--Sobic002G384200 Sobic002G126200--Sobic002G005700 Sobic002G126200--Sobic003G030000 Sobic003G257200 Sobic003G257200 Sobic002G126200--Sobic003G257200 Sobic002G123900 Sobic002G123900 Sobic002G126200--Sobic002G123900
Octagon: transcription factors


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