Gene annotation
Transcriptome id Sobic.002G293200.1
Synonym Sb02g032420
Functional annotation signal peptidase complex subunit 3, putative, expressed
UniProt C5X7S1
Pfam PF04573
Panther DB PTHR12804
NCBI CDD KOG3372; Signal peptidase complex subunit
KEGG Orthology K12948; SPCS3, signal peptidase complex subunit 3
Gene Ontology GO:0016021; integral component of membrane GO:0008233peptidase activity GO:0006465signal peptide processing GO:0005787signal peptidase complex


Orthologs (automatic annotation)
TAIR AT5G27430 : Signal peptidase subunit
RAP-DB (Rice) LOC_Os09g38370.1 : signal peptidase complex subunit 3, putative, expressed
MaizeGDB (Corn) Zm00025a014538 , Zm00025a030369 , Zm00025a047925
Brachypodium KQJ91423
Barley HORVU5Hr1G088300.1
Wheat TraesCS5A02G356900 , TraesCS5B02G359400 , TraesCS5D02G366000
Populus -


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cDNA sequences
Sobic.002G293200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G121100 ZOS11-03 - C2H2 zinc finger protein, expressed -
2 Sobic.006G016600 OsSigP3 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09648: mitochondrial inner membrane protease subunit 2
3 Sobic.003G049800 protein of unknown function domain containing protein, expressed -
4 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
5 Sobic.002G384200 expressed protein -
6 Sobic.004G128000 expressed protein -
7 Sobic.002G005700 - -
8 Sobic.004G080400 hrpN-interacting protein from Malus, putative, expressed -
9 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
10 Sobic.004G244800 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
11 Sobic.003G338966 - -
12 Sobic.010G015200 expressed protein -
13 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
14 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
15 Sobic.010G231700 expressed protein -
16 Sobic.009G206700 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
17 Sobic.006G180600 expressed protein -
18 Sobic.001G172800 RNA recognition motif containing protein, putative, expressed K09564: peptidyl-prolyl isomerase E (cyclophilin E)
19 Sobic.003G152700 craniofacial development protein 1, putative, expressed -
20 Sobic.002G291066 - K11254: histone H4


Gene co-expression network
sample Sobic002G293200 Sobic002G293200 Sobic005G121100 Sobic005G121100 Sobic002G293200--Sobic005G121100 Sobic006G016600 Sobic006G016600 Sobic002G293200--Sobic006G016600 Sobic003G049800 Sobic003G049800 Sobic002G293200--Sobic003G049800 Sobic001G041000 Sobic001G041000 Sobic002G293200--Sobic001G041000 Sobic002G384200 Sobic002G384200 Sobic002G293200--Sobic002G384200 Sobic004G128000 Sobic004G128000 Sobic002G293200--Sobic004G128000 Sobic002G005700 Sobic002G005700 Sobic002G293200--Sobic002G005700 Sobic004G080400 Sobic004G080400 Sobic002G293200--Sobic004G080400 Sobic006G066600 Sobic006G066600 Sobic002G293200--Sobic006G066600 Sobic005G121100--Sobic002G384200 Sobic003G022800 Sobic003G022800 Sobic005G121100--Sobic003G022800 Sobic007G213600 Sobic007G213600 Sobic005G121100--Sobic007G213600 Sobic006G075801 Sobic006G075801 Sobic005G121100--Sobic006G075801 Sobic006G180600 Sobic006G180600 Sobic005G121100--Sobic006G180600 Sobic004G342900 Sobic004G342900 Sobic005G121100--Sobic004G342900 Sobic001G324900 Sobic001G324900 Sobic005G121100--Sobic001G324900 Sobic005G121100--Sobic002G005700 Sobic001G405900 Sobic001G405900 Sobic005G121100--Sobic001G405900 Sobic006G016600--Sobic002G384200 Sobic003G041300 Sobic003G041300 Sobic006G016600--Sobic003G041300 Sobic006G016600--Sobic003G049800 Sobic003G030000 Sobic003G030000 Sobic006G016600--Sobic003G030000 Sobic009G107200 Sobic009G107200 Sobic006G016600--Sobic009G107200 Sobic004G175700 Sobic004G175700 Sobic006G016600--Sobic004G175700 Sobic006G016600--Sobic006G180600 Sobic007G192100 Sobic007G192100 Sobic006G016600--Sobic007G192100 Sobic006G016600--Sobic002G293200 Sobic010G231700 Sobic010G231700 Sobic003G049800--Sobic010G231700 Sobic002G352200 Sobic002G352200 Sobic003G049800--Sobic002G352200 Sobic002G124900 Sobic002G124900 Sobic003G049800--Sobic002G124900 Sobic003G074900 Sobic003G074900 Sobic003G049800--Sobic003G074900 Sobic003G016300 Sobic003G016300 Sobic003G049800--Sobic003G016300 Sobic007G159700 Sobic007G159700 Sobic003G049800--Sobic007G159700 Sobic006G271000 Sobic006G271000 Sobic003G049800--Sobic006G271000 Sobic009G206700 Sobic009G206700 Sobic003G049800--Sobic009G206700 Sobic006G124300 Sobic006G124300 Sobic003G049800--Sobic006G124300 Sobic009G015000 Sobic009G015000 Sobic001G041000--Sobic009G015000 Sobic002G253000 Sobic002G253000 Sobic001G041000--Sobic002G253000 Sobic001G041000--Sobic004G128000 Sobic010G057100 Sobic010G057100 Sobic001G041000--Sobic010G057100 Sobic004G099500 Sobic004G099500 Sobic001G041000--Sobic004G099500 Sobic006G244800 Sobic006G244800 Sobic001G041000--Sobic006G244800 Sobic007G168400 Sobic007G168400 Sobic001G041000--Sobic007G168400 Sobic003G187100 Sobic003G187100 Sobic001G041000--Sobic003G187100 Sobic004G259700 Sobic004G259700 Sobic001G041000--Sobic004G259700 Sobic002G384200--Sobic005G121100 Sobic002G384200--Sobic006G016600 Sobic002G384200--Sobic006G180600 Sobic002G384200--Sobic001G324900 Sobic002G384200--Sobic009G206700 Sobic001G047100 Sobic001G047100 Sobic002G384200--Sobic001G047100 Sobic010G076400 Sobic010G076400 Sobic002G384200--Sobic010G076400 Sobic003G358300 Sobic003G358300 Sobic002G384200--Sobic003G358300 Sobic010G054200 Sobic010G054200 Sobic002G384200--Sobic010G054200 Sobic004G128000--Sobic009G015000 Sobic004G128000--Sobic010G057100 Sobic004G128000--Sobic004G099500 Sobic007G172300 Sobic007G172300 Sobic004G128000--Sobic007G172300 Sobic004G128000--Sobic009G206700 Sobic007G045700 Sobic007G045700 Sobic004G128000--Sobic007G045700 Sobic004G128000--Sobic002G253000 Sobic003G338966 Sobic003G338966 Sobic004G128000--Sobic003G338966 Sobic009G177700 Sobic009G177700 Sobic004G128000--Sobic009G177700 Sobic007G184400 Sobic007G184400 Sobic002G005700--Sobic007G184400 Sobic001G172800 Sobic001G172800 Sobic002G005700--Sobic001G172800 Sobic010G094500 Sobic010G094500 Sobic002G005700--Sobic010G094500 Sobic002G005700--Sobic005G121100 Sobic002G005700--Sobic002G384200 Sobic002G005700--Sobic003G022800 Sobic007G200100 Sobic007G200100 Sobic002G005700--Sobic007G200100 Sobic006G212000 Sobic006G212000 Sobic002G005700--Sobic006G212000 Sobic002G005700--Sobic006G016600 Sobic004G080400--Sobic003G022800 Sobic004G080400--Sobic003G041300 Sobic007G169000 Sobic007G169000 Sobic004G080400--Sobic007G169000 Sobic004G080400--Sobic002G293200 Sobic004G080400--Sobic006G016600 Sobic008G086401 Sobic008G086401 Sobic004G080400--Sobic008G086401 Sobic004G080400--Sobic005G121100 Sobic004G080400--Sobic002G005700 Sobic002G126200 Sobic002G126200 Sobic004G080400--Sobic002G126200 Sobic004G318400 Sobic004G318400 Sobic006G066600--Sobic004G318400 Sobic004G067900 Sobic004G067900 Sobic006G066600--Sobic004G067900 Sobic004G102900 Sobic004G102900 Sobic006G066600--Sobic004G102900 Sobic006G244500 Sobic006G244500 Sobic006G066600--Sobic006G244500 Sobic007G018000 Sobic007G018000 Sobic006G066600--Sobic007G018000 Sobic004G028800 Sobic004G028800 Sobic006G066600--Sobic004G028800 Sobic001G488200 Sobic001G488200 Sobic006G066600--Sobic001G488200 Sobic004G155300 Sobic004G155300 Sobic006G066600--Sobic004G155300 Sobic002G308400 Sobic002G308400 Sobic006G066600--Sobic002G308400
Octagon: transcription factors


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