Gene annotation
Transcriptome id Sobic.002G384200.1,Sobic.002G384200.2
Synonym
Functional annotation expressed protein
UniProt A0A1B6QFQ8 , A0A1W0W7D4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g43430.1 : expressed protein
MaizeGDB (Corn) Zm00025a015257 , Zm00025a048833
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G121100 ZOS11-03 - C2H2 zinc finger protein, expressed -
2 Sobic.006G016600 OsSigP3 - Putative Type I Signal Peptidase homologue@ employs a putative Ser/Lys catalytic dyad, expressed K09648: mitochondrial inner membrane protease subunit 2
3 Sobic.006G180600 expressed protein -
4 Sobic.001G324900 proline-rich family protein, putative, expressed -
5 Sobic.009G206700 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
6 Sobic.001G047100 OTU-like cysteine protease family protein, putative, expressed K18342: OTU domain-containing protein 6
7 Sobic.010G076400 40S ribosomal protein S17, putative, expressed K02962: RP-S17e, small subunit ribosomal protein S17e
8 Sobic.003G358300 josephin, putative, expressed K11863: ATXN3, Ataxin-3
9 Sobic.010G054200 peptidase, T1 family, putative, expressed K02728: 20S proteasome subunit alpha 3
10 Sobic.002G246200 expressed protein -
11 Sobic.003G128200 expressed protein -
12 Sobic.006G231700 LSM domain containing protein, expressed K12626: U6 snRNA-associated Sm-like protein LSm7
13 Sobic.002G372400 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
14 Sobic.006G149200 LSM domain containing protein, expressed K11096: SNRPD2, small nuclear ribonucleoprotein D2
15 Sobic.002G005700 - -
16 Sobic.004G128000 expressed protein -
17 Sobic.002G291066 - K11254: histone H4
18 Sobic.004G032000 peptidase, T1 family, putative, expressed K02725: 20S proteasome subunit alpha 6
19 Sobic.004G333500 proteasome maturation factor UMP1 family protein, expressed K11599: POMP, proteasome maturation protein
20 Sobic.006G201500 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e


Gene co-expression network
sample Sobic002G384200 Sobic002G384200 Sobic005G121100 Sobic005G121100 Sobic002G384200--Sobic005G121100 Sobic006G016600 Sobic006G016600 Sobic002G384200--Sobic006G016600 Sobic006G180600 Sobic006G180600 Sobic002G384200--Sobic006G180600 Sobic001G324900 Sobic001G324900 Sobic002G384200--Sobic001G324900 Sobic009G206700 Sobic009G206700 Sobic002G384200--Sobic009G206700 Sobic001G047100 Sobic001G047100 Sobic002G384200--Sobic001G047100 Sobic010G076400 Sobic010G076400 Sobic002G384200--Sobic010G076400 Sobic003G358300 Sobic003G358300 Sobic002G384200--Sobic003G358300 Sobic010G054200 Sobic010G054200 Sobic002G384200--Sobic010G054200 Sobic005G121100--Sobic002G384200 Sobic003G022800 Sobic003G022800 Sobic005G121100--Sobic003G022800 Sobic007G213600 Sobic007G213600 Sobic005G121100--Sobic007G213600 Sobic006G075801 Sobic006G075801 Sobic005G121100--Sobic006G075801 Sobic005G121100--Sobic006G180600 Sobic004G342900 Sobic004G342900 Sobic005G121100--Sobic004G342900 Sobic005G121100--Sobic001G324900 Sobic002G005700 Sobic002G005700 Sobic005G121100--Sobic002G005700 Sobic001G405900 Sobic001G405900 Sobic005G121100--Sobic001G405900 Sobic006G016600--Sobic002G384200 Sobic003G041300 Sobic003G041300 Sobic006G016600--Sobic003G041300 Sobic003G049800 Sobic003G049800 Sobic006G016600--Sobic003G049800 Sobic003G030000 Sobic003G030000 Sobic006G016600--Sobic003G030000 Sobic009G107200 Sobic009G107200 Sobic006G016600--Sobic009G107200 Sobic004G175700 Sobic004G175700 Sobic006G016600--Sobic004G175700 Sobic006G016600--Sobic006G180600 Sobic007G192100 Sobic007G192100 Sobic006G016600--Sobic007G192100 Sobic002G293200 Sobic002G293200 Sobic006G016600--Sobic002G293200 Sobic002G246200 Sobic002G246200 Sobic006G180600--Sobic002G246200 Sobic001G100400 Sobic001G100400 Sobic006G180600--Sobic001G100400 Sobic010G015200 Sobic010G015200 Sobic006G180600--Sobic010G015200 Sobic007G211500 Sobic007G211500 Sobic006G180600--Sobic007G211500 Sobic006G180600--Sobic002G384200 Sobic010G199100 Sobic010G199100 Sobic006G180600--Sobic010G199100 Sobic001G533300 Sobic001G533300 Sobic006G180600--Sobic001G533300 Sobic007G091000 Sobic007G091000 Sobic006G180600--Sobic007G091000 Sobic001G441000 Sobic001G441000 Sobic006G180600--Sobic001G441000 Sobic002G022400 Sobic002G022400 Sobic001G324900--Sobic002G022400 Sobic004G247200 Sobic004G247200 Sobic001G324900--Sobic004G247200 Sobic001G525400 Sobic001G525400 Sobic001G324900--Sobic001G525400 Sobic002G280200 Sobic002G280200 Sobic001G324900--Sobic002G280200 Sobic008G161000 Sobic008G161000 Sobic001G324900--Sobic008G161000 Sobic003G249800 Sobic003G249800 Sobic001G324900--Sobic003G249800 Sobic006G062800 Sobic006G062800 Sobic001G324900--Sobic006G062800 Sobic010G217900 Sobic010G217900 Sobic001G324900--Sobic010G217900 Sobic010G204300 Sobic010G204300 Sobic001G324900--Sobic010G204300 Sobic006G057200 Sobic006G057200 Sobic009G206700--Sobic006G057200 Sobic010G264300 Sobic010G264300 Sobic009G206700--Sobic010G264300 Sobic001G286200 Sobic001G286200 Sobic009G206700--Sobic001G286200 Sobic009G206700--Sobic002G246200 Sobic004G244800 Sobic004G244800 Sobic009G206700--Sobic004G244800 Sobic009G212200 Sobic009G212200 Sobic009G206700--Sobic009G212200 Sobic001G519000 Sobic001G519000 Sobic009G206700--Sobic001G519000 Sobic001G175300 Sobic001G175300 Sobic009G206700--Sobic001G175300 Sobic002G356400 Sobic002G356400 Sobic009G206700--Sobic002G356400 Sobic002G258800 Sobic002G258800 Sobic001G047100--Sobic002G258800 Sobic002G261800 Sobic002G261800 Sobic001G047100--Sobic002G261800 Sobic001G467300 Sobic001G467300 Sobic001G047100--Sobic001G467300 Sobic001G216200 Sobic001G216200 Sobic001G047100--Sobic001G216200 Sobic009G065400 Sobic009G065400 Sobic001G047100--Sobic009G065400 Sobic002G282400 Sobic002G282400 Sobic001G047100--Sobic002G282400 Sobic001G089500 Sobic001G089500 Sobic001G047100--Sobic001G089500 Sobic007G019100 Sobic007G019100 Sobic001G047100--Sobic007G019100 Sobic003G332401 Sobic003G332401 Sobic001G047100--Sobic003G332401 Sobic002G372400 Sobic002G372400 Sobic010G076400--Sobic002G372400 Sobic009G223300 Sobic009G223300 Sobic010G076400--Sobic009G223300 Sobic003G078200 Sobic003G078200 Sobic010G076400--Sobic003G078200 Sobic009G054800 Sobic009G054800 Sobic010G076400--Sobic009G054800 Sobic009G173500 Sobic009G173500 Sobic010G076400--Sobic009G173500 Sobic009G233400 Sobic009G233400 Sobic010G076400--Sobic009G233400 Sobic003G109600 Sobic003G109600 Sobic010G076400--Sobic003G109600 Sobic004G198400 Sobic004G198400 Sobic010G076400--Sobic004G198400 Sobic002G379500 Sobic002G379500 Sobic010G076400--Sobic002G379500 Sobic001G066700 Sobic001G066700 Sobic003G358300--Sobic001G066700 Sobic006G231700 Sobic006G231700 Sobic003G358300--Sobic006G231700 Sobic005G111100 Sobic005G111100 Sobic003G358300--Sobic005G111100 Sobic002G044000 Sobic002G044000 Sobic003G358300--Sobic002G044000 Sobic004G032000 Sobic004G032000 Sobic003G358300--Sobic004G032000 Sobic004G166500 Sobic004G166500 Sobic003G358300--Sobic004G166500 Sobic002G386300 Sobic002G386300 Sobic003G358300--Sobic002G386300 Sobic007G163700 Sobic007G163700 Sobic003G358300--Sobic007G163700 Sobic009G191200 Sobic009G191200 Sobic003G358300--Sobic009G191200 Sobic006G081100 Sobic006G081100 Sobic010G054200--Sobic006G081100 Sobic003G249700 Sobic003G249700 Sobic010G054200--Sobic003G249700 Sobic001G058900 Sobic001G058900 Sobic010G054200--Sobic001G058900 Sobic010G054200--Sobic009G223300 Sobic003G129800 Sobic003G129800 Sobic010G054200--Sobic003G129800 Sobic001G225700 Sobic001G225700 Sobic010G054200--Sobic001G225700 Sobic010G054200--Sobic009G233400 Sobic003G150000 Sobic003G150000 Sobic010G054200--Sobic003G150000 Sobic010G054200--Sobic002G372400
Octagon: transcription factors


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