Gene annotation
Transcriptome id Sobic.001G047100.1
Synonym Sb01g004350
Functional annotation OTU-like cysteine protease family protein, putative, expressed
UniProt C5WW58
Pfam PF02338
Panther DB PTHR12419 PTHR12419:SF10
NCBI CDD KOG2606; OTU (ovarian tumor)-like cysteine protease
KEGG Orthology K18342; OTU domain-containing protein 6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62940 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os04g52850.1 : OTU-like cysteine protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a016514
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G047100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
2 Sobic.002G261800 snRK1-interacting protein 1, putative, expressed -
3 Sobic.001G467300 40S ribosomal protein S3a, putative, expressed K02984: RP-S3Ae, small subunit ribosomal protein S3Ae
4 Sobic.001G216200 transcription factor BTF3, putative, expressed K01527: EGD1, nascent polypeptide-associated complex subunit beta
5 Sobic.009G065400 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
6 Sobic.002G282400 expressed protein -
7 Sobic.001G089500 RNA recognition motif containing protein, putative, expressed -
8 Sobic.007G019100 mitochondrial ribosomal protein S10, putative, expressed K02946: RP-S10, MRPS10, small subunit ribosomal protein S10
9 Sobic.003G332401 - K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
10 Sobic.004G103800 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
11 Sobic.003G107600 3-beta-hydroxysteroid-Delta-isomerase, putative, expressed K01824: cholestenol Delta-isomerase
12 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
13 Sobic.007G045600 MSP domain containing protein, expressed -
14 Sobic.002G374900 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
15 Sobic.009G232000 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
16 Sobic.002G259000 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
17 Sobic.009G068800 expressed protein -
18 Sobic.007G095400 expressed protein -
19 Sobic.001G331900 expressed protein -
20 Sobic.006G220700 signal recognition particle 14 kDa protein, putative, expressed K03104: signal recognition particle subunit SRP14


Gene co-expression network
sample Sobic001G047100 Sobic001G047100 Sobic002G258800 Sobic002G258800 Sobic001G047100--Sobic002G258800 Sobic002G261800 Sobic002G261800 Sobic001G047100--Sobic002G261800 Sobic001G467300 Sobic001G467300 Sobic001G047100--Sobic001G467300 Sobic001G216200 Sobic001G216200 Sobic001G047100--Sobic001G216200 Sobic009G065400 Sobic009G065400 Sobic001G047100--Sobic009G065400 Sobic002G282400 Sobic002G282400 Sobic001G047100--Sobic002G282400 Sobic001G089500 Sobic001G089500 Sobic001G047100--Sobic001G089500 Sobic007G019100 Sobic007G019100 Sobic001G047100--Sobic007G019100 Sobic003G332401 Sobic003G332401 Sobic001G047100--Sobic003G332401 Sobic010G182300 Sobic010G182300 Sobic002G258800--Sobic010G182300 Sobic002G259000 Sobic002G259000 Sobic002G258800--Sobic002G259000 Sobic004G152700 Sobic004G152700 Sobic002G258800--Sobic004G152700 Sobic004G152400 Sobic004G152400 Sobic002G258800--Sobic004G152400 Sobic001G046300 Sobic001G046300 Sobic002G258800--Sobic001G046300 Sobic004G103800 Sobic004G103800 Sobic002G258800--Sobic004G103800 Sobic010G259900 Sobic010G259900 Sobic002G258800--Sobic010G259900 Sobic003G321700 Sobic003G321700 Sobic002G258800--Sobic003G321700 Sobic002G258800--Sobic009G065400 Sobic001G064800 Sobic001G064800 Sobic002G261800--Sobic001G064800 Sobic006G141500 Sobic006G141500 Sobic002G261800--Sobic006G141500 Sobic002G261800--Sobic002G282400 Sobic006G204300 Sobic006G204300 Sobic002G261800--Sobic006G204300 Sobic010G153100 Sobic010G153100 Sobic002G261800--Sobic010G153100 Sobic004G172700 Sobic004G172700 Sobic002G261800--Sobic004G172700 Sobic001G445800 Sobic001G445800 Sobic002G261800--Sobic001G445800 Sobic009G016201 Sobic009G016201 Sobic002G261800--Sobic009G016201 Sobic002G180600 Sobic002G180600 Sobic002G261800--Sobic002G180600 Sobic001G467300--Sobic009G065400 Sobic001G402300 Sobic001G402300 Sobic001G467300--Sobic001G402300 Sobic002G413400 Sobic002G413400 Sobic001G467300--Sobic002G413400 Sobic001G073000 Sobic001G073000 Sobic001G467300--Sobic001G073000 Sobic001G467300--Sobic001G216200 Sobic001G491100 Sobic001G491100 Sobic001G467300--Sobic001G491100 Sobic003G248600 Sobic003G248600 Sobic001G467300--Sobic003G248600 Sobic010G173100 Sobic010G173100 Sobic001G467300--Sobic010G173100 Sobic008G004000 Sobic008G004000 Sobic001G467300--Sobic008G004000 Sobic008G058300 Sobic008G058300 Sobic001G216200--Sobic008G058300 Sobic007G186300 Sobic007G186300 Sobic001G216200--Sobic007G186300 Sobic001G216200--Sobic008G004000 Sobic001G216200--Sobic003G248600 Sobic004G300900 Sobic004G300900 Sobic001G216200--Sobic004G300900 Sobic001G415500 Sobic001G415500 Sobic001G216200--Sobic001G415500 Sobic001G216200--Sobic001G402300 Sobic001G054200 Sobic001G054200 Sobic001G216200--Sobic001G054200 Sobic004G107600 Sobic004G107600 Sobic001G216200--Sobic004G107600 Sobic009G065400--Sobic001G046300 Sobic010G182600 Sobic010G182600 Sobic009G065400--Sobic010G182600 Sobic003G025200 Sobic003G025200 Sobic009G065400--Sobic003G025200 Sobic001G011200 Sobic001G011200 Sobic009G065400--Sobic001G011200 Sobic002G364100 Sobic002G364100 Sobic009G065400--Sobic002G364100 Sobic001G377800 Sobic001G377800 Sobic009G065400--Sobic001G377800 Sobic009G065400--Sobic002G259000 Sobic002G374900 Sobic002G374900 Sobic009G065400--Sobic002G374900 Sobic009G065400--Sobic010G182300 Sobic003G249800 Sobic003G249800 Sobic002G282400--Sobic003G249800 Sobic010G243200 Sobic010G243200 Sobic002G282400--Sobic010G243200 Sobic009G143400 Sobic009G143400 Sobic002G282400--Sobic009G143400 Sobic002G282400--Sobic006G141500 Sobic003G181500 Sobic003G181500 Sobic002G282400--Sobic003G181500 Sobic001G037000 Sobic001G037000 Sobic002G282400--Sobic001G037000 Sobic001G071100 Sobic001G071100 Sobic002G282400--Sobic001G071100 Sobic002G211900 Sobic002G211900 Sobic002G282400--Sobic002G211900 Sobic002G393000 Sobic002G393000 Sobic002G282400--Sobic002G393000 Sobic007G045600 Sobic007G045600 Sobic001G089500--Sobic007G045600 Sobic008G073300 Sobic008G073300 Sobic001G089500--Sobic008G073300 Sobic002G202300 Sobic002G202300 Sobic001G089500--Sobic002G202300 Sobic007G115100 Sobic007G115100 Sobic001G089500--Sobic007G115100 Sobic001G224400 Sobic001G224400 Sobic001G089500--Sobic001G224400 Sobic001G089500--Sobic010G153100 Sobic003G155400 Sobic003G155400 Sobic001G089500--Sobic003G155400 Sobic004G196300 Sobic004G196300 Sobic001G089500--Sobic004G196300 Sobic002G296300 Sobic002G296300 Sobic001G089500--Sobic002G296300 Sobic007G019100--Sobic007G045600 Sobic001G132100 Sobic001G132100 Sobic007G019100--Sobic001G132100 Sobic003G323600 Sobic003G323600 Sobic007G019100--Sobic003G323600 Sobic009G119900 Sobic009G119900 Sobic007G019100--Sobic009G119900 Sobic001G048832 Sobic001G048832 Sobic007G019100--Sobic001G048832 Sobic004G170400 Sobic004G170400 Sobic007G019100--Sobic004G170400 Sobic007G114200 Sobic007G114200 Sobic007G019100--Sobic007G114200 Sobic001G074700 Sobic001G074700 Sobic007G019100--Sobic001G074700 Sobic001G342200 Sobic001G342200 Sobic007G019100--Sobic001G342200 Sobic003G332401--Sobic002G296300 Sobic003G115800 Sobic003G115800 Sobic003G332401--Sobic003G115800 Sobic003G311700 Sobic003G311700 Sobic003G332401--Sobic003G311700 Sobic009G246950 Sobic009G246950 Sobic003G332401--Sobic009G246950 Sobic003G332401--Sobic007G186300 Sobic002G090700 Sobic002G090700 Sobic003G332401--Sobic002G090700 Sobic003G007500 Sobic003G007500 Sobic003G332401--Sobic003G007500 Sobic003G332401--Sobic001G054200 Sobic002G368400 Sobic002G368400 Sobic003G332401--Sobic002G368400
Octagon: transcription factors


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