Gene annotation
Transcriptome id Sobic.002G259000.1
Synonym Sb02g029400
Functional annotation ribosomal protein L7Ae, putative, expressed
UniProt C5X592
Pfam PF01248
Panther DB PTHR23105 PTHR23105:SF41
NCBI CDD KOG3166; 60S ribosomal protein L7A
KEGG Orthology K02936; RP-L7Ae, large subunit ribosomal protein L7Ae
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62870 : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
RAP-DB (Rice) LOC_Os08g23710.1 : ribosomal protein L7Ae, putative, expressed
MaizeGDB (Corn) Zm00025a047589 , Zm00025a005285 , Zm00025a014311
Brachypodium KQJ85068 , KQJ85069 , KQJ90941
Barley HORVU5Hr1G076700.9 , HORVU5Hr1G076700.8 , HORVU5Hr1G076700.1 , HORVU5Hr1G076700.3 , HORVU5Hr1G076700.2 , HORVU5Hr1G076700.5 , HORVU5Hr1G076700.4 , HORVU5Hr1G076700.7 , HORVU5Hr1G076700.6 , HORVU5Hr1G076700.10 , HORVU7Hr1G054670.8 , HORVU7Hr1G054670.3 , HORVU7Hr1G054670.2 , HORVU7Hr1G054670.1 , HORVU7Hr1G054670.7 , HORVU7Hr1G054670.6 , HORVU7Hr1G054670.5 , HORVU7Hr1G054670.4
Wheat TraesCS5D02G296200 , TraesCS5B02G287900 , TraesCS4D02G148500 , TraesCS7D02G262800 , TraesCS7D02G262800 , TraesCS5A02G288400 , TraesCS7A02G261600 , TraesCS7B02G159700
Populus -


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cDNA sequences
Sobic.002G259000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G103800 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
2 Sobic.004G152700 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
3 Sobic.010G182600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
4 Sobic.001G046300 ribosomal protein, putative, expressed K02981: RP-S2e, small subunit ribosomal protein S2e
5 Sobic.010G182300 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
6 Sobic.004G145801 - K02978: RP-S27e, small subunit ribosomal protein S27e
7 Sobic.002G258800 ribosomal protein L7Ae, putative, expressed K02936: RP-L7Ae, large subunit ribosomal protein L7Ae
8 Sobic.004G104100 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
9 Sobic.002G364100 40S ribosomal protein S3a, putative, expressed K02984: RP-S3Ae, small subunit ribosomal protein S3Ae
10 Sobic.001G091801 - K02978: RP-S27e, small subunit ribosomal protein S27e
11 Sobic.004G104300 ribosomal protein L5, putative, expressed K02868: RP-L11e, large subunit ribosomal protein L11e
12 Sobic.010G259900 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
13 Sobic.009G065400 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
14 Sobic.007G019000 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
15 Sobic.007G212600 40S ribosomal protein S15a, putative, expressed K02957: RP-S15Ae, small subunit ribosomal protein S15Ae
16 Sobic.004G152400 ribosomal protein L29, putative, expressed K02918: RP-L35e, large subunit ribosomal protein L35e
17 Sobic.010G230700 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e
18 Sobic.003G321700 KH domain containing protein, putative, expressed K11884: PNO1, RNA-binding protein PNO1
19 Sobic.006G221200 60S ribosomal protein L27-3, putative, expressed K02901: RP-L27e, large subunit ribosomal protein L27e
20 Sobic.002G406500 elongation factor protein, putative, expressed K03232: elongation factor 1-beta


Gene co-expression network
sample Sobic002G259000 Sobic002G259000 Sobic004G103800 Sobic004G103800 Sobic002G259000--Sobic004G103800 Sobic004G152700 Sobic004G152700 Sobic002G259000--Sobic004G152700 Sobic010G182600 Sobic010G182600 Sobic002G259000--Sobic010G182600 Sobic001G046300 Sobic001G046300 Sobic002G259000--Sobic001G046300 Sobic010G182300 Sobic010G182300 Sobic002G259000--Sobic010G182300 Sobic004G145801 Sobic004G145801 Sobic002G259000--Sobic004G145801 Sobic002G258800 Sobic002G258800 Sobic002G259000--Sobic002G258800 Sobic004G104100 Sobic004G104100 Sobic002G259000--Sobic004G104100 Sobic002G364100 Sobic002G364100 Sobic002G259000--Sobic002G364100 Sobic004G103800--Sobic004G104100 Sobic004G104300 Sobic004G104300 Sobic004G103800--Sobic004G104300 Sobic007G019000 Sobic007G019000 Sobic004G103800--Sobic007G019000 Sobic010G166100 Sobic010G166100 Sobic004G103800--Sobic010G166100 Sobic004G103800--Sobic004G152700 Sobic001G091801 Sobic001G091801 Sobic004G103800--Sobic001G091801 Sobic010G230700 Sobic010G230700 Sobic004G103800--Sobic010G230700 Sobic004G322200 Sobic004G322200 Sobic004G103800--Sobic004G322200 Sobic007G018300 Sobic007G018300 Sobic004G103800--Sobic007G018300 Sobic004G152700--Sobic004G103800 Sobic004G152700--Sobic002G259000 Sobic004G152700--Sobic004G104100 Sobic004G152700--Sobic010G230700 Sobic004G152700--Sobic010G182300 Sobic006G221200 Sobic006G221200 Sobic004G152700--Sobic006G221200 Sobic004G152700--Sobic004G104300 Sobic004G152700--Sobic004G145801 Sobic010G259900 Sobic010G259900 Sobic004G152700--Sobic010G259900 Sobic010G182600--Sobic002G259000 Sobic010G182600--Sobic001G046300 Sobic010G182200 Sobic010G182200 Sobic010G182600--Sobic010G182200 Sobic010G182600--Sobic002G364100 Sobic010G182600--Sobic004G145801 Sobic010G182600--Sobic001G091801 Sobic009G065400 Sobic009G065400 Sobic010G182600--Sobic009G065400 Sobic002G406500 Sobic002G406500 Sobic010G182600--Sobic002G406500 Sobic002G364500 Sobic002G364500 Sobic010G182600--Sobic002G364500 Sobic007G212600 Sobic007G212600 Sobic001G046300--Sobic007G212600 Sobic001G046300--Sobic004G103800 Sobic001G046300--Sobic001G091801 Sobic001G046300--Sobic002G364100 Sobic001G046300--Sobic002G259000 Sobic001G046300--Sobic004G104100 Sobic001G011200 Sobic001G011200 Sobic001G046300--Sobic001G011200 Sobic001G046300--Sobic004G104300 Sobic009G163800 Sobic009G163800 Sobic001G046300--Sobic009G163800 Sobic010G182300--Sobic002G258800 Sobic010G182300--Sobic002G259000 Sobic010G182300--Sobic004G152700 Sobic010G182300--Sobic004G103800 Sobic010G182300--Sobic010G259900 Sobic010G182300--Sobic001G046300 Sobic010G260100 Sobic010G260100 Sobic010G182300--Sobic010G260100 Sobic010G182300--Sobic009G065400 Sobic010G182300--Sobic010G182600 Sobic004G145801--Sobic001G091801 Sobic004G145801--Sobic004G104100 Sobic005G019700 Sobic005G019700 Sobic004G145801--Sobic005G019700 Sobic004G145801--Sobic007G212600 Sobic004G145801--Sobic010G230700 Sobic004G145801--Sobic004G103800 Sobic004G280700 Sobic004G280700 Sobic004G145801--Sobic004G280700 Sobic001G054900 Sobic001G054900 Sobic004G145801--Sobic001G054900 Sobic004G145801--Sobic004G104300 Sobic002G258800--Sobic010G182300 Sobic002G258800--Sobic002G259000 Sobic002G258800--Sobic004G152700 Sobic004G152400 Sobic004G152400 Sobic002G258800--Sobic004G152400 Sobic002G258800--Sobic001G046300 Sobic002G258800--Sobic004G103800 Sobic002G258800--Sobic010G259900 Sobic003G321700 Sobic003G321700 Sobic002G258800--Sobic003G321700 Sobic002G258800--Sobic009G065400 Sobic004G104100--Sobic001G091801 Sobic004G104100--Sobic006G221200 Sobic004G104100--Sobic004G103800 Sobic004G104100--Sobic010G230700 Sobic004G104100--Sobic010G166100 Sobic004G104100--Sobic004G104300 Sobic004G104100--Sobic005G019700 Sobic009G166500 Sobic009G166500 Sobic004G104100--Sobic009G166500 Sobic009G050300 Sobic009G050300 Sobic004G104100--Sobic009G050300 Sobic002G364100--Sobic002G364500 Sobic002G364100--Sobic001G046300 Sobic002G364100--Sobic009G163800 Sobic006G260400 Sobic006G260400 Sobic002G364100--Sobic006G260400 Sobic009G022400 Sobic009G022400 Sobic002G364100--Sobic009G022400 Sobic002G364100--Sobic010G182600 Sobic002G364100--Sobic001G091801 Sobic002G364100--Sobic010G166100 Sobic004G331400 Sobic004G331400 Sobic002G364100--Sobic004G331400
Octagon: transcription factors


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