Gene annotation
Transcriptome id Sobic.006G220700.2
Synonym Sb06g029010
Functional annotation signal recognition particle 14 kDa protein, putative, expressed
UniProt A0A1Z5RF49
Pfam PF02290
Panther DB PTHR12013
NCBI CDD KOG1761; Signal recognition particle, subunit Srp14
KEGG Orthology K03104; signal recognition particle subunit SRP14
Gene Ontology GO:0008312; 7S RNA binding GO:0006614SRP-dependent cotranslational protein targeting to membrane GO:0005786signal recognition particle, endoplasmic reticulum targeting


Orthologs (automatic annotation)
TAIR AT2G43640 : Signal recognition particle, SRP9/SRP14 subunit
RAP-DB (Rice) LOC_Os04g53220.1 : signal recognition particle 14 kDa protein, putative, expressed
MaizeGDB (Corn) Zm00025a009716
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G220700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G153100 prefoldin, putative, expressed K14009: BCAP31, B-cell receptor-associated protein 31
2 Sobic.001G331900 expressed protein -
3 Sobic.003G362400 G10 protein, putative, expressed K12873: BUD31, bud site selection protein 31
4 Sobic.008G132800 expressed protein -
5 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
6 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
7 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
8 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
9 Sobic.002G116200 adenylate kinase isoenzyme 6, putative, expressed K18532: AK6, adenylate kinase
10 Sobic.009G068800 expressed protein -
11 Sobic.005G092800 expressed protein -
12 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
13 Sobic.010G213400 protein transport protein SEC61 subunit gamma, putative, expressed K07342: SEC61G, SSS1, protein transport protein SEC61 subunit gamma and related proteins
14 Sobic.009G065400 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
15 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
16 Sobic.010G046300 rRNA-processing protein FCF, putative, expressed K14566: UTP24, U3 small nucleolar RNA-associated protein 24
17 Sobic.010G106200 signal recognition particle 9 kDa protein, putative, expressed K03109: signal recognition particle subunit SRP9
18 Sobic.006G141500 expressed protein -
19 Sobic.007G163700 zinc finger protein 593, putative, expressed K14821: bud site selection protein 20
20 Sobic.003G442400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E


Gene co-expression network
sample Sobic006G220700 Sobic006G220700 Sobic010G153100 Sobic010G153100 Sobic006G220700--Sobic010G153100 Sobic001G331900 Sobic001G331900 Sobic006G220700--Sobic001G331900 Sobic003G362400 Sobic003G362400 Sobic006G220700--Sobic003G362400 Sobic008G132800 Sobic008G132800 Sobic006G220700--Sobic008G132800 Sobic004G107600 Sobic004G107600 Sobic006G220700--Sobic004G107600 Sobic005G157200 Sobic005G157200 Sobic006G220700--Sobic005G157200 Sobic002G078400 Sobic002G078400 Sobic006G220700--Sobic002G078400 Sobic001G529000 Sobic001G529000 Sobic006G220700--Sobic001G529000 Sobic002G116200 Sobic002G116200 Sobic006G220700--Sobic002G116200 Sobic001G084900 Sobic001G084900 Sobic010G153100--Sobic001G084900 Sobic001G224400 Sobic001G224400 Sobic010G153100--Sobic001G224400 Sobic003G155400 Sobic003G155400 Sobic010G153100--Sobic003G155400 Sobic001G445800 Sobic001G445800 Sobic010G153100--Sobic001G445800 Sobic010G154700 Sobic010G154700 Sobic010G153100--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic010G153100--Sobic010G213400 Sobic007G115100 Sobic007G115100 Sobic010G153100--Sobic007G115100 Sobic001G067601 Sobic001G067601 Sobic010G153100--Sobic001G067601 Sobic006G141500 Sobic006G141500 Sobic010G153100--Sobic006G141500 Sobic001G331900--Sobic004G107600 Sobic001G331900--Sobic005G157200 Sobic008G058300 Sobic008G058300 Sobic001G331900--Sobic008G058300 Sobic001G331900--Sobic002G078400 Sobic001G331900--Sobic008G132800 Sobic004G300900 Sobic004G300900 Sobic001G331900--Sobic004G300900 Sobic001G377800 Sobic001G377800 Sobic001G331900--Sobic001G377800 Sobic001G331900--Sobic003G362400 Sobic001G331900--Sobic001G529000 Sobic003G362400--Sobic002G078400 Sobic003G362400--Sobic004G107600 Sobic003G362400--Sobic001G529000 Sobic007G091000 Sobic007G091000 Sobic003G362400--Sobic007G091000 Sobic005G111100 Sobic005G111100 Sobic003G362400--Sobic005G111100 Sobic003G362400--Sobic002G116200 Sobic003G362400--Sobic001G331900 Sobic003G362400--Sobic010G213400 Sobic009G232000 Sobic009G232000 Sobic003G362400--Sobic009G232000 Sobic010G029400 Sobic010G029400 Sobic008G132800--Sobic010G029400 Sobic008G132800--Sobic002G078400 Sobic009G016201 Sobic009G016201 Sobic008G132800--Sobic009G016201 Sobic008G132800--Sobic001G331900 Sobic004G066800 Sobic004G066800 Sobic008G132800--Sobic004G066800 Sobic001G105100 Sobic001G105100 Sobic008G132800--Sobic001G105100 Sobic008G132800--Sobic005G157200 Sobic010G065400 Sobic010G065400 Sobic008G132800--Sobic010G065400 Sobic003G217100 Sobic003G217100 Sobic008G132800--Sobic003G217100 Sobic004G107600--Sobic001G331900 Sobic004G107600--Sobic003G362400 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic005G092800 Sobic005G092800 Sobic004G107600--Sobic005G092800 Sobic004G107600--Sobic005G157200 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic004G107600--Sobic001G445800 Sobic005G157200--Sobic008G058300 Sobic005G157200--Sobic001G331900 Sobic005G157200--Sobic001G377800 Sobic003G025200 Sobic003G025200 Sobic005G157200--Sobic003G025200 Sobic002G406500 Sobic002G406500 Sobic005G157200--Sobic002G406500 Sobic007G163700 Sobic007G163700 Sobic005G157200--Sobic007G163700 Sobic005G157200--Sobic010G029400 Sobic005G157200--Sobic004G107600 Sobic005G157200--Sobic001G529000 Sobic002G078400--Sobic004G300900 Sobic002G078400--Sobic010G065400 Sobic002G078400--Sobic003G362400 Sobic002G078400--Sobic007G091000 Sobic002G078400--Sobic008G132800 Sobic002G078400--Sobic001G445800 Sobic002G078400--Sobic001G331900 Sobic009G198500 Sobic009G198500 Sobic002G078400--Sobic009G198500 Sobic002G078400--Sobic010G029400 Sobic001G529000--Sobic003G362400 Sobic004G248800 Sobic004G248800 Sobic001G529000--Sobic004G248800 Sobic003G124800 Sobic003G124800 Sobic001G529000--Sobic003G124800 Sobic001G529000--Sobic001G331900 Sobic001G529000--Sobic005G157200 Sobic001G529000--Sobic007G163700 Sobic010G039800 Sobic010G039800 Sobic001G529000--Sobic010G039800 Sobic007G203700 Sobic007G203700 Sobic001G529000--Sobic007G203700 Sobic001G529000--Sobic004G300900 Sobic002G116200--Sobic003G362400 Sobic002G116200--Sobic005G111100 Sobic002G116200--Sobic005G157200 Sobic002G116200--Sobic002G078400 Sobic002G116200--Sobic003G321700 Sobic002G116200--Sobic001G445800 Sobic002G116200--Sobic004G300900 Sobic001G128400 Sobic001G128400 Sobic002G116200--Sobic001G128400 Sobic002G116200--Sobic001G331900
Octagon: transcription factors


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