Gene annotation
Transcriptome id Sobic.001G216200.1
Synonym Sb01g019040, BTF3, ATBTF3
Functional annotation transcription factor BTF3, putative, expressed
UniProt C5WYC3
Pfam PF01849
Panther DB PTHR10351 PTHR10351:SF50
NCBI CDD KOG2240; RNA polymerase II general transcription factor BTF3 and related proteins
KEGG Orthology K01527; EGD1, nascent polypeptide-associated complex subunit beta
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17880 : basic transcription factor 3
RAP-DB (Rice) LOC_Os03g01910.1 : transcription factor BTF3, putative, expressed
MaizeGDB (Corn) Zm00025a017597 , Zm00025a006566 , Zm00025a053556
Brachypodium KQJ97150 , KQK24070
Barley HORVU1Hr1G042270.4 , HORVU1Hr1G042270.5 , HORVU1Hr1G042270.2 , HORVU1Hr1G042270.3 , HORVU1Hr1G042270.1
Wheat TraesCS5A02G550800 , TraesCSU02G127100 , TraesCS1B02G175700 , TraesCS1A02G159300 , TraesCS1A02G159300 , TraesCS1D02G156700 , TraesCS4B02G385900 , TraesCS4B02G385900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G058300 RNA polymerases N 8 kDa subunit, putative, expressed K03007: RPB10, DNA-directed RNA polymerases I, II, and III subunit RPABC5
2 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
3 Sobic.008G004000 ribosomal protein L10, putative, expressed K14815: mRNA turnover protein 4
4 Sobic.003G248600 26S protease regulatory subunit 7, putative, expressed K03061: PSMC2, 26S proteasome regulatory subunit T1
5 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
6 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein
7 Sobic.001G402300 RNA recognition motif containing protein, putative, expressed K11094: U2 small nuclear ribonucleoprotein B''
8 Sobic.001G054200 green ripe-like, putative, expressed -
9 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
10 Sobic.004G086600 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
11 Sobic.009G065400 ribosomal protein L13, putative, expressed K02873: RP-L13e, large subunit ribosomal protein L13e
12 Sobic.005G157200 prefoldin subunit, putative, expressed K09549: prefoldin subunit 2
13 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
14 Sobic.010G182600 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
15 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
16 Sobic.001G331900 expressed protein -
17 Sobic.001G005900 PPR repeat domain containing protein, putative, expressed -
18 Sobic.008G161800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
19 Sobic.001G073000 expressed protein K09659: dolichol-phosphate mannosyltransferase subunit 3
20 Sobic.001G467300 40S ribosomal protein S3a, putative, expressed K02984: RP-S3Ae, small subunit ribosomal protein S3Ae


Gene co-expression network
sample Sobic001G216200 Sobic001G216200 Sobic008G058300 Sobic008G058300 Sobic001G216200--Sobic008G058300 Sobic007G186300 Sobic007G186300 Sobic001G216200--Sobic007G186300 Sobic008G004000 Sobic008G004000 Sobic001G216200--Sobic008G004000 Sobic003G248600 Sobic003G248600 Sobic001G216200--Sobic003G248600 Sobic004G300900 Sobic004G300900 Sobic001G216200--Sobic004G300900 Sobic001G415500 Sobic001G415500 Sobic001G216200--Sobic001G415500 Sobic001G402300 Sobic001G402300 Sobic001G216200--Sobic001G402300 Sobic001G054200 Sobic001G054200 Sobic001G216200--Sobic001G054200 Sobic004G107600 Sobic004G107600 Sobic001G216200--Sobic004G107600 Sobic005G157200 Sobic005G157200 Sobic008G058300--Sobic005G157200 Sobic003G025200 Sobic003G025200 Sobic008G058300--Sobic003G025200 Sobic001G331900 Sobic001G331900 Sobic008G058300--Sobic001G331900 Sobic006G052400 Sobic006G052400 Sobic008G058300--Sobic006G052400 Sobic008G058300--Sobic004G300900 Sobic010G029400 Sobic010G029400 Sobic008G058300--Sobic010G029400 Sobic004G002350 Sobic004G002350 Sobic008G058300--Sobic004G002350 Sobic002G078400 Sobic002G078400 Sobic008G058300--Sobic002G078400 Sobic001G377800 Sobic001G377800 Sobic008G058300--Sobic001G377800 Sobic003G007500 Sobic003G007500 Sobic007G186300--Sobic003G007500 Sobic007G186300--Sobic001G054200 Sobic003G115800 Sobic003G115800 Sobic007G186300--Sobic003G115800 Sobic007G186300--Sobic003G248600 Sobic001G007200 Sobic001G007200 Sobic007G186300--Sobic001G007200 Sobic009G246950 Sobic009G246950 Sobic007G186300--Sobic009G246950 Sobic010G083700 Sobic010G083700 Sobic007G186300--Sobic010G083700 Sobic009G146100 Sobic009G146100 Sobic007G186300--Sobic009G146100 Sobic009G152200 Sobic009G152200 Sobic007G186300--Sobic009G152200 Sobic005G003800 Sobic005G003800 Sobic008G004000--Sobic005G003800 Sobic009G232000 Sobic009G232000 Sobic008G004000--Sobic009G232000 Sobic009G190300 Sobic009G190300 Sobic008G004000--Sobic009G190300 Sobic009G065400 Sobic009G065400 Sobic008G004000--Sobic009G065400 Sobic001G018800 Sobic001G018800 Sobic008G004000--Sobic001G018800 Sobic001G011200 Sobic001G011200 Sobic008G004000--Sobic001G011200 Sobic008G004000--Sobic001G216200 Sobic010G100000 Sobic010G100000 Sobic008G004000--Sobic010G100000 Sobic002G364500 Sobic002G364500 Sobic008G004000--Sobic002G364500 Sobic003G220600 Sobic003G220600 Sobic003G248600--Sobic003G220600 Sobic003G248600--Sobic007G186300 Sobic007G045600 Sobic007G045600 Sobic003G248600--Sobic007G045600 Sobic005G176000 Sobic005G176000 Sobic003G248600--Sobic005G176000 Sobic004G321900 Sobic004G321900 Sobic003G248600--Sobic004G321900 Sobic001G403700 Sobic001G403700 Sobic003G248600--Sobic001G403700 Sobic003G248600--Sobic009G146100 Sobic002G296300 Sobic002G296300 Sobic003G248600--Sobic002G296300 Sobic001G073000 Sobic001G073000 Sobic003G248600--Sobic001G073000 Sobic004G300900--Sobic002G078400 Sobic006G141500 Sobic006G141500 Sobic004G300900--Sobic006G141500 Sobic009G198500 Sobic009G198500 Sobic004G300900--Sobic009G198500 Sobic004G300900--Sobic001G331900 Sobic001G005900 Sobic001G005900 Sobic004G300900--Sobic001G005900 Sobic004G225500 Sobic004G225500 Sobic004G300900--Sobic004G225500 Sobic004G300900--Sobic008G058300 Sobic004G300900--Sobic003G115800 Sobic001G445800 Sobic001G445800 Sobic004G300900--Sobic001G445800 Sobic001G415500--Sobic001G007200 Sobic008G161800 Sobic008G161800 Sobic001G415500--Sobic008G161800 Sobic003G253000 Sobic003G253000 Sobic001G415500--Sobic003G253000 Sobic001G415500--Sobic009G146100 Sobic006G108400 Sobic006G108400 Sobic001G415500--Sobic006G108400 Sobic001G415500--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic001G415500--Sobic004G049900 Sobic004G293700 Sobic004G293700 Sobic001G415500--Sobic004G293700 Sobic010G121300 Sobic010G121300 Sobic001G415500--Sobic010G121300 Sobic008G137600 Sobic008G137600 Sobic001G402300--Sobic008G137600 Sobic001G226100 Sobic001G226100 Sobic001G402300--Sobic001G226100 Sobic004G141700 Sobic004G141700 Sobic001G402300--Sobic004G141700 Sobic010G251100 Sobic010G251100 Sobic001G402300--Sobic010G251100 Sobic007G118000 Sobic007G118000 Sobic001G402300--Sobic007G118000 Sobic009G232400 Sobic009G232400 Sobic001G402300--Sobic009G232400 Sobic002G413400 Sobic002G413400 Sobic001G402300--Sobic002G413400 Sobic001G529000 Sobic001G529000 Sobic001G402300--Sobic001G529000 Sobic001G285300 Sobic001G285300 Sobic001G402300--Sobic001G285300 Sobic001G054200--Sobic010G083700 Sobic006G263900 Sobic006G263900 Sobic001G054200--Sobic006G263900 Sobic006G212100 Sobic006G212100 Sobic001G054200--Sobic006G212100 Sobic001G054200--Sobic007G186300 Sobic001G054200--Sobic004G293700 Sobic001G054200--Sobic009G246950 Sobic004G079100 Sobic004G079100 Sobic001G054200--Sobic004G079100 Sobic006G232200 Sobic006G232200 Sobic001G054200--Sobic006G232200 Sobic001G054200--Sobic003G115800 Sobic004G107600--Sobic001G331900 Sobic003G362400 Sobic003G362400 Sobic004G107600--Sobic003G362400 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic005G092800 Sobic005G092800 Sobic004G107600--Sobic005G092800 Sobic004G107600--Sobic005G157200 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic004G107600--Sobic001G445800
Octagon: transcription factors


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