Gene annotation
Transcriptome id Sobic.008G086401.1
Synonym -
Functional annotation -
UniProt A0A1Z5R6K0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G022800 ribosomal protein L23 family protein, putative, expressed K02892: RP-L23, MRPL23, large subunit ribosomal protein L23
2 Sobic.006G212000 PPR repeat domain containing protein, putative, expressed -
3 Sobic.004G357900 GHMP kinases ATP-binding protein, putative, expressed K00872: homoserine kinase
4 Sobic.004G356600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.005G097700 - -
6 Sobic.001G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
7 Sobic.003G222400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
8 Sobic.009G070900 - -
9 Sobic.007G169000 similar to Putative uncharacterized protein P0562A06.5(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.006G165650 - -
11 Sobic.010G153532 - -
12 Sobic.002G034400 expressed protein -
13 Sobic.004G080400 hrpN-interacting protein from Malus, putative, expressed -
14 Sobic.007G207300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@calvin cycle protein CP12, putative, expressed -
15 Sobic.002G175550 - -
16 Sobic.010G045200 expressed protein -
17 Sobic.003G423100 NAM, putative, expressed -
18 Sobic.006G272450 - -
19 Sobic.009G116766 - -
20 Sobic.004G205200 PPR repeat containing protein, expressed -


Gene co-expression network
sample Sobic008G086401 Sobic008G086401 Sobic003G022800 Sobic003G022800 Sobic008G086401--Sobic003G022800 Sobic006G212000 Sobic006G212000 Sobic008G086401--Sobic006G212000 Sobic004G357900 Sobic004G357900 Sobic008G086401--Sobic004G357900 Sobic004G356600 Sobic004G356600 Sobic008G086401--Sobic004G356600 Sobic005G097700 Sobic005G097700 Sobic008G086401--Sobic005G097700 Sobic001G256900 Sobic001G256900 Sobic008G086401--Sobic001G256900 Sobic003G222400 Sobic003G222400 Sobic008G086401--Sobic003G222400 Sobic009G070900 Sobic009G070900 Sobic008G086401--Sobic009G070900 Sobic007G169000 Sobic007G169000 Sobic008G086401--Sobic007G169000 Sobic003G022800--Sobic007G169000 Sobic010G045200 Sobic010G045200 Sobic003G022800--Sobic010G045200 Sobic003G022800--Sobic004G356600 Sobic007G085350 Sobic007G085350 Sobic003G022800--Sobic007G085350 Sobic003G022800--Sobic008G086401 Sobic009G167300 Sobic009G167300 Sobic003G022800--Sobic009G167300 Sobic003G201300 Sobic003G201300 Sobic003G022800--Sobic003G201300 Sobic009G116766 Sobic009G116766 Sobic003G022800--Sobic009G116766 Sobic005G087600 Sobic005G087600 Sobic003G022800--Sobic005G087600 Sobic006G212000--Sobic008G086401 Sobic002G293900 Sobic002G293900 Sobic006G212000--Sobic002G293900 Sobic006G212000--Sobic003G222400 Sobic006G212000--Sobic004G357900 Sobic002G120200 Sobic002G120200 Sobic006G212000--Sobic002G120200 Sobic006G212000--Sobic004G356600 Sobic002G034400 Sobic002G034400 Sobic006G212000--Sobic002G034400 Sobic006G212000--Sobic003G022800 Sobic003G365400 Sobic003G365400 Sobic006G212000--Sobic003G365400 Sobic004G357900--Sobic008G086401 Sobic004G357900--Sobic006G212000 Sobic004G357900--Sobic002G120200 Sobic004G357900--Sobic001G256900 Sobic001G362400 Sobic001G362400 Sobic004G357900--Sobic001G362400 Sobic004G357900--Sobic003G022800 Sobic010G153532 Sobic010G153532 Sobic004G357900--Sobic010G153532 Sobic003G219400 Sobic003G219400 Sobic004G357900--Sobic003G219400 Sobic005G112632 Sobic005G112632 Sobic004G357900--Sobic005G112632 Sobic006G090201 Sobic006G090201 Sobic004G356600--Sobic006G090201 Sobic007G072901 Sobic007G072901 Sobic004G356600--Sobic007G072901 Sobic009G010800 Sobic009G010800 Sobic004G356600--Sobic009G010800 Sobic001G361500 Sobic001G361500 Sobic004G356600--Sobic001G361500 Sobic003G423100 Sobic003G423100 Sobic004G356600--Sobic003G423100 Sobic003G357000 Sobic003G357000 Sobic004G356600--Sobic003G357000 Sobic009G164200 Sobic009G164200 Sobic004G356600--Sobic009G164200 Sobic006G185400 Sobic006G185400 Sobic004G356600--Sobic006G185400 Sobic003G245700 Sobic003G245700 Sobic004G356600--Sobic003G245700 Sobic002G175550 Sobic002G175550 Sobic005G097700--Sobic002G175550 Sobic005G097700--Sobic004G356600 Sobic002G004400 Sobic002G004400 Sobic005G097700--Sobic002G004400 Sobic005G097700--Sobic006G090201 Sobic007G210400 Sobic007G210400 Sobic005G097700--Sobic007G210400 Sobic005G097700--Sobic007G072901 Sobic005G097700--Sobic003G357000 Sobic005G097700--Sobic002G034400 Sobic006G228400 Sobic006G228400 Sobic005G097700--Sobic006G228400 Sobic001G256900--Sobic004G356600 Sobic001G256900--Sobic007G210400 Sobic001G256900--Sobic003G423100 Sobic001G256900--Sobic005G097700 Sobic003G343100 Sobic003G343100 Sobic001G256900--Sobic003G343100 Sobic001G256900--Sobic006G090201 Sobic001G378550 Sobic001G378550 Sobic001G256900--Sobic001G378550 Sobic010G231400 Sobic010G231400 Sobic001G256900--Sobic010G231400 Sobic001G049000 Sobic001G049000 Sobic001G256900--Sobic001G049000 Sobic006G272450 Sobic006G272450 Sobic003G222400--Sobic006G272450 Sobic002G356700 Sobic002G356700 Sobic003G222400--Sobic002G356700 Sobic003G222400--Sobic009G070900 Sobic001G042400 Sobic001G042400 Sobic003G222400--Sobic001G042400 Sobic010G256433 Sobic010G256433 Sobic003G222400--Sobic010G256433 Sobic003G222400--Sobic007G085350 Sobic009G233600 Sobic009G233600 Sobic003G222400--Sobic009G233600 Sobic003G222400--Sobic004G356600 Sobic003G222400--Sobic002G034400 Sobic009G070900--Sobic006G272450 Sobic009G070900--Sobic001G378550 Sobic002G052500 Sobic002G052500 Sobic009G070900--Sobic002G052500 Sobic008G023500 Sobic008G023500 Sobic009G070900--Sobic008G023500 Sobic009G070900--Sobic006G090201 Sobic009G070900--Sobic003G245700 Sobic009G070900--Sobic009G164200 Sobic009G070900--Sobic002G356700 Sobic009G070900--Sobic006G185400 Sobic007G169000--Sobic003G022800 Sobic002G171600 Sobic002G171600 Sobic007G169000--Sobic002G171600 Sobic007G209100 Sobic007G209100 Sobic007G169000--Sobic007G209100 Sobic004G342900 Sobic004G342900 Sobic007G169000--Sobic004G342900 Sobic004G296100 Sobic004G296100 Sobic007G169000--Sobic004G296100 Sobic009G178900 Sobic009G178900 Sobic007G169000--Sobic009G178900 Sobic003G337100 Sobic003G337100 Sobic007G169000--Sobic003G337100 Sobic003G364700 Sobic003G364700 Sobic007G169000--Sobic003G364700 Sobic003G047300 Sobic003G047300 Sobic007G169000--Sobic003G047300
Octagon: transcription factors


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